EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000041180 (Gene tree)
Gene ID: -
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 24713 bases
Position: chrMCGX01027085.1:553814-578526
Accession: 108524174
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000035026	RTC	PF01137.21	3.1e-81	1	1
ENSRBIP00000035020	RTC	PF01137.21	6.8e-63	1	1
ENSRBIP00000035020	RTC_insert	PF05189.13	1.8e-24	1	1
ENSRBIP00000035026	RTC_insert	PF05189.13	2.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000059017	RTCA-202	1140	XM_017865149	ENSRBIP00000035026	379 (aa)	XP_017720638	A0A2K6MGW0
ENSRBIT00000059011	RTCA-201	1647	XM_017865151	ENSRBIP00000035020	309 (aa)	XP_017720640	A0A2K6MGZ0

Gene Model

Click here to download ENSRBIG00000041180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000041180's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000041180	RTCA	100	98.153	ENSG00000137996	RTCA	100	98.153	Homo_sapiens
ENSRBIG00000041180	RTCA	100	71.197	ENSAPOG00000001345	rtca	98	69.519	Acanthochromis_polyacanthus
ENSRBIG00000041180	RTCA	87	93.680	ENSAMEG00000008855	RTCA	100	93.680	Ailuropoda_melanoleuca
ENSRBIG00000041180	RTCA	100	70.874	ENSACIG00000019643	rtca	99	68.984	Amphilophus_citrinellus
ENSRBIG00000041180	RTCA	100	70.550	ENSAOCG00000014979	rtca	99	68.338	Amphiprion_ocellaris
ENSRBIG00000041180	RTCA	100	70.550	ENSAPEG00000006945	rtca	99	68.338	Amphiprion_percula
ENSRBIG00000041180	RTCA	100	70.550	ENSATEG00000006315	rtca	96	68.681	Anabas_testudineus
ENSRBIG00000041180	RTCA	100	81.553	ENSAPLG00000015430	RTCA	100	77.112	Anas_platyrhynchos
ENSRBIG00000041180	RTCA	100	96.764	ENSANAG00000025446	RTCA	100	96.042	Aotus_nancymaae
ENSRBIG00000041180	RTCA	100	69.579	ENSACLG00000020770	rtca	99	67.282	Astatotilapia_calliptera
ENSRBIG00000041180	RTCA	100	71.845	ENSAMXG00000043271	rtca	100	69.921	Astyanax_mexicanus
ENSRBIG00000041180	RTCA	100	94.498	ENSBTAG00000006321	RTCA	100	91.821	Bos_taurus
ENSRBIG00000041180	RTCA	100	96.764	ENSCJAG00000003398	RTCA	100	93.931	Callithrix_jacchus
ENSRBIG00000041180	RTCA	100	94.175	ENSCAFG00000020010	RTCA	68	91.293	Canis_familiaris
ENSRBIG00000041180	RTCA	100	94.175	ENSCAFG00020011528	RTCA	57	91.293	Canis_lupus_dingo
ENSRBIG00000041180	RTCA	100	94.175	ENSCHIG00000018937	RTCA	100	91.557	Capra_hircus
ENSRBIG00000041180	RTCA	100	91.909	ENSTSYG00000011305	RTCA	100	91.293	Carlito_syrichta
ENSRBIG00000041180	RTCA	100	96.440	ENSCCAG00000021844	RTCA	100	96.306	Cebus_capucinus
ENSRBIG00000041180	RTCA	100	98.945	ENSCATG00000019364	RTCA	100	98.945	Cercocebus_atys
ENSRBIG00000041180	RTCA	100	95.146	ENSCLAG00000006125	RTCA	100	95.268	Chinchilla_lanigera
ENSRBIG00000041180	RTCA	100	99.029	ENSCSAG00000001509	RTCA	100	95.778	Chlorocebus_sabaeus
ENSRBIG00000041180	RTCA	100	92.557	ENSCHOG00000005211	RTCA	100	89.710	Choloepus_hoffmanni
ENSRBIG00000041180	RTCA	100	82.201	ENSCPBG00000026658	RTCA	100	79.947	Chrysemys_picta_bellii
ENSRBIG00000041180	RTCA	100	54.839	ENSCING00000007875	-	98	53.743	Ciona_intestinalis
ENSRBIG00000041180	RTCA	100	53.074	ENSCSAVG00000007269	-	98	52.279	Ciona_savignyi
ENSRBIG00000041180	RTCA	100	99.472	ENSCANG00000040106	RTCA	100	99.472	Colobus_angolensis_palliatus
ENSRBIG00000041180	RTCA	87	90.335	ENSCGRG00001013163	Rtca	85	90.335	Cricetulus_griseus_chok1gshd
ENSRBIG00000041180	RTCA	100	68.932	ENSCSEG00000000530	rtca	98	66.402	Cynoglossus_semilaevis
ENSRBIG00000041180	RTCA	100	56.464	ENSCVAG00000021809	rtca	100	56.464	Cyprinodon_variegatus
ENSRBIG00000041180	RTCA	100	73.139	ENSDARG00000002215	rtca	100	70.712	Danio_rerio
ENSRBIG00000041180	RTCA	100	93.851	ENSDNOG00000000456	RTCA	100	90.765	Dasypus_novemcinctus
ENSRBIG00000041180	RTCA	100	90.939	ENSDORG00000005448	Rtca	100	88.654	Dipodomys_ordii
ENSRBIG00000041180	RTCA	98	37.466	FBgn0025630	Rtca	98	37.466	Drosophila_melanogaster
ENSRBIG00000041180	RTCA	96	52.603	ENSEBUG00000008556	rtca	97	52.603	Eptatretus_burgeri
ENSRBIG00000041180	RTCA	100	93.528	ENSEASG00005015926	RTCA	100	90.765	Equus_asinus_asinus
ENSRBIG00000041180	RTCA	100	93.528	ENSECAG00000019831	RTCA	100	90.765	Equus_caballus
ENSRBIG00000041180	RTCA	91	82.659	ENSEEUG00000001165	RTCA	100	82.659	Erinaceus_europaeus
ENSRBIG00000041180	RTCA	100	70.227	ENSELUG00000003741	rtca	99	69.251	Esox_lucius
ENSRBIG00000041180	RTCA	100	94.175	ENSFCAG00000024460	RTCA	100	91.384	Felis_catus
ENSRBIG00000041180	RTCA	89	83.333	ENSFALG00000002443	RTCA	90	80.347	Ficedula_albicollis
ENSRBIG00000041180	RTCA	100	95.146	ENSFDAG00000012070	-	100	91.821	Fukomys_damarensis
ENSRBIG00000041180	RTCA	98	74.426	ENSFDAG00000016084	-	100	72.267	Fukomys_damarensis
ENSRBIG00000041180	RTCA	70	69.767	ENSFHEG00000002868	rtca	96	67.699	Fundulus_heteroclitus
ENSRBIG00000041180	RTCA	100	68.285	ENSGMOG00000013264	rtca	100	65.963	Gadus_morhua
ENSRBIG00000041180	RTCA	100	81.877	ENSGALG00000005277	RTCA	100	79.947	Gallus_gallus
ENSRBIG00000041180	RTCA	100	71.197	ENSGAFG00000011853	rtca	99	68.602	Gambusia_affinis
ENSRBIG00000041180	RTCA	100	68.285	ENSGACG00000013497	rtca	100	66.491	Gasterosteus_aculeatus
ENSRBIG00000041180	RTCA	81	80.065	ENSGAGG00000023306	RTCA	100	80.065	Gopherus_agassizii
ENSRBIG00000041180	RTCA	100	96.764	ENSGGOG00000044018	-	100	93.931	Gorilla_gorilla
ENSRBIG00000041180	RTCA	100	98.153	ENSGGOG00000009546	-	100	98.153	Gorilla_gorilla
ENSRBIG00000041180	RTCA	100	69.256	ENSHBUG00000002114	rtca	99	67.018	Haplochromis_burtoni
ENSRBIG00000041180	RTCA	100	93.851	ENSHGLG00000002617	RTCA	100	91.029	Heterocephalus_glaber_female
ENSRBIG00000041180	RTCA	100	93.851	ENSHGLG00100006056	RTCA	100	91.029	Heterocephalus_glaber_male
ENSRBIG00000041180	RTCA	100	63.754	ENSHCOG00000020628	rtca	89	62.533	Hippocampus_comes
ENSRBIG00000041180	RTCA	100	72.492	ENSIPUG00000024803	rtca	100	70.449	Ictalurus_punctatus
ENSRBIG00000041180	RTCA	100	94.498	ENSSTOG00000013528	-	91	94.498	Ictidomys_tridecemlineatus
ENSRBIG00000041180	RTCA	100	83.495	ENSSTOG00000033099	-	100	80.000	Ictidomys_tridecemlineatus
ENSRBIG00000041180	RTCA	100	64.116	ENSJJAG00000016178	Rtca	100	64.116	Jaculus_jaculus
ENSRBIG00000041180	RTCA	100	70.550	ENSKMAG00000006651	rtca	98	68.984	Kryptolebias_marmoratus
ENSRBIG00000041180	RTCA	100	67.638	ENSLBEG00000002448	-	98	68.239	Labrus_bergylta
ENSRBIG00000041180	RTCA	100	67.638	ENSLBEG00000028971	rtca	99	66.310	Labrus_bergylta
ENSRBIG00000041180	RTCA	100	78.964	ENSLACG00000013666	RTCA	100	75.462	Latimeria_chalumnae
ENSRBIG00000041180	RTCA	100	72.492	ENSLOCG00000000093	rtca	99	70.449	Lepisosteus_oculatus
ENSRBIG00000041180	RTCA	100	92.233	ENSLAFG00000001473	RTCA	100	89.446	Loxodonta_africana
ENSRBIG00000041180	RTCA	100	99.208	ENSMFAG00000034132	RTCA	100	99.208	Macaca_fascicularis
ENSRBIG00000041180	RTCA	100	98.681	ENSMMUG00000019105	RTCA	100	98.681	Macaca_mulatta
ENSRBIG00000041180	RTCA	100	99.029	ENSMNEG00000037163	RTCA	100	99.029	Macaca_nemestrina
ENSRBIG00000041180	RTCA	100	81.530	ENSMLEG00000042151	RTCA	100	81.530	Mandrillus_leucophaeus
ENSRBIG00000041180	RTCA	100	72.816	ENSMAMG00000016536	rtca	100	70.185	Mastacembelus_armatus
ENSRBIG00000041180	RTCA	100	69.579	ENSMZEG00005017945	rtca	99	67.282	Maylandia_zebra
ENSRBIG00000041180	RTCA	100	80.583	ENSMGAG00000006892	RTCA	100	80.625	Meleagris_gallopavo
ENSRBIG00000041180	RTCA	100	90.291	ENSMAUG00000008488	Rtca	100	88.127	Mesocricetus_auratus
ENSRBIG00000041180	RTCA	100	95.469	ENSMICG00000008643	RTCA	100	95.469	Microcebus_murinus
ENSRBIG00000041180	RTCA	100	90.939	ENSMOCG00000016660	Rtca	100	88.391	Microtus_ochrogaster
ENSRBIG00000041180	RTCA	100	70.874	ENSMMOG00000007750	rtca	100	70.874	Mola_mola
ENSRBIG00000041180	RTCA	100	88.673	ENSMODG00000003557	RTCA	100	86.544	Monodelphis_domestica
ENSRBIG00000041180	RTCA	100	72.168	ENSMALG00000020844	rtca	100	69.657	Monopterus_albus
ENSRBIG00000041180	RTCA	100	89.968	MGP_CAROLIEiJ_G0025565	Rtca	100	89.437	Mus_caroli
ENSRBIG00000041180	RTCA	100	89.320	ENSMUSG00000000339	Rtca	100	89.437	Mus_musculus
ENSRBIG00000041180	RTCA	100	89.644	MGP_PahariEiJ_G0027011	Rtca	100	88.732	Mus_pahari
ENSRBIG00000041180	RTCA	100	89.644	MGP_SPRETEiJ_G0026515	Rtca	100	88.732	Mus_spretus
ENSRBIG00000041180	RTCA	100	94.822	ENSMPUG00000012119	RTCA	100	91.557	Mustela_putorius_furo
ENSRBIG00000041180	RTCA	100	87.379	ENSMLUG00000009922	RTCA	100	83.947	Myotis_lucifugus
ENSRBIG00000041180	RTCA	100	90.291	ENSNGAG00000011540	Rtca	99	88.127	Nannospalax_galili
ENSRBIG00000041180	RTCA	100	69.579	ENSNBRG00000003062	rtca	99	67.282	Neolamprologus_brichardi
ENSRBIG00000041180	RTCA	100	98.153	ENSNLEG00000031426	RTCA	100	98.153	Nomascus_leucogenys
ENSRBIG00000041180	RTCA	59	95.122	ENSMEUG00000010030	-	77	72.727	Notamacropus_eugenii
ENSRBIG00000041180	RTCA	87	86.989	ENSOPRG00000012092	RTCA	71	86.989	Ochotona_princeps
ENSRBIG00000041180	RTCA	100	93.851	ENSODEG00000006990	RTCA	96	90.934	Octodon_degus
ENSRBIG00000041180	RTCA	100	69.579	ENSONIG00000007753	rtca	99	67.282	Oreochromis_niloticus
ENSRBIG00000041180	RTCA	100	87.055	ENSOANG00000012055	RTCA	99	84.848	Ornithorhynchus_anatinus
ENSRBIG00000041180	RTCA	100	95.146	ENSOCUG00000014247	RTCA	100	91.821	Oryctolagus_cuniculus
ENSRBIG00000041180	RTCA	100	69.579	ENSORLG00000013605	rtca	100	67.546	Oryzias_latipes
ENSRBIG00000041180	RTCA	100	69.579	ENSORLG00020001904	rtca	100	67.546	Oryzias_latipes_hni
ENSRBIG00000041180	RTCA	100	69.579	ENSORLG00015021064	rtca	100	67.546	Oryzias_latipes_hsok
ENSRBIG00000041180	RTCA	100	70.874	ENSOMEG00000000756	rtca	100	68.338	Oryzias_melastigma
ENSRBIG00000041180	RTCA	99	85.714	ENSOGAG00000005627	RTCA	100	82.058	Otolemur_garnettii
ENSRBIG00000041180	RTCA	100	93.528	ENSOARG00000018122	RTCA	100	93.711	Ovis_aries
ENSRBIG00000041180	RTCA	100	97.625	ENSPPAG00000035119	RTCA	100	97.625	Pan_paniscus
ENSRBIG00000041180	RTCA	100	94.175	ENSPPRG00000000350	RTCA	100	91.384	Panthera_pardus
ENSRBIG00000041180	RTCA	100	94.175	ENSPTIG00000012816	RTCA	100	91.384	Panthera_tigris_altaica
ENSRBIG00000041180	RTCA	100	97.625	ENSPTRG00000001004	RTCA	100	97.625	Pan_troglodytes
ENSRBIG00000041180	RTCA	100	98.382	ENSPANG00000000346	RTCA	100	94.987	Papio_anubis
ENSRBIG00000041180	RTCA	100	73.786	ENSPKIG00000001653	rtca	100	71.240	Paramormyrops_kingsleyae
ENSRBIG00000041180	RTCA	100	82.848	ENSPSIG00000011408	RTCA	100	80.475	Pelodiscus_sinensis
ENSRBIG00000041180	RTCA	100	89.968	ENSPEMG00000018582	Rtca	100	87.599	Peromyscus_maniculatus_bairdii
ENSRBIG00000041180	RTCA	99	57.605	ENSPMAG00000009110	rtca	100	56.579	Petromyzon_marinus
ENSRBIG00000041180	RTCA	100	88.997	ENSPCIG00000007684	RTCA	100	86.807	Phascolarctos_cinereus
ENSRBIG00000041180	RTCA	100	71.845	ENSPFOG00000004824	rtca	100	69.393	Poecilia_formosa
ENSRBIG00000041180	RTCA	100	71.845	ENSPLAG00000011753	rtca	99	69.129	Poecilia_latipinna
ENSRBIG00000041180	RTCA	100	71.845	ENSPMEG00000020469	rtca	99	69.129	Poecilia_mexicana
ENSRBIG00000041180	RTCA	100	72.816	ENSPREG00000001365	rtca	99	69.921	Poecilia_reticulata
ENSRBIG00000041180	RTCA	100	97.735	ENSPPYG00000001115	RTCA	100	94.723	Pongo_abelii
ENSRBIG00000041180	RTCA	100	89.968	ENSPCAG00000005076	RTCA	100	87.335	Procavia_capensis
ENSRBIG00000041180	RTCA	100	96.117	ENSPCOG00000005603	RTCA	100	92.876	Propithecus_coquereli
ENSRBIG00000041180	RTCA	100	92.612	ENSPVAG00000009478	RTCA	100	92.612	Pteropus_vampyrus
ENSRBIG00000041180	RTCA	100	69.579	ENSPNYG00000004722	rtca	99	67.282	Pundamilia_nyererei
ENSRBIG00000041180	RTCA	100	72.816	ENSPNAG00000022270	rtca	100	70.185	Pygocentrus_nattereri
ENSRBIG00000041180	RTCA	100	89.968	ENSRNOG00000014575	Rtca	100	87.599	Rattus_norvegicus
ENSRBIG00000041180	RTCA	100	100.000	ENSRROG00000024929	RTCA	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000041180	RTCA	100	96.440	ENSSBOG00000028626	RTCA	100	95.515	Saimiri_boliviensis_boliviensis
ENSRBIG00000041180	RTCA	100	88.997	ENSSHAG00000001758	RTCA	100	86.807	Sarcophilus_harrisii
ENSRBIG00000041180	RTCA	100	68.608	ENSSMAG00000014680	rtca	97	66.756	Scophthalmus_maximus
ENSRBIG00000041180	RTCA	100	70.874	ENSSDUG00000015585	rtca	97	68.633	Seriola_dumerili
ENSRBIG00000041180	RTCA	100	70.550	ENSSLDG00000018985	rtca	95	68.681	Seriola_lalandi_dorsalis
ENSRBIG00000041180	RTCA	100	85.113	ENSSARG00000013993	RTCA	100	85.489	Sorex_araneus
ENSRBIG00000041180	RTCA	51	78.981	ENSSPUG00000016255	-	100	78.981	Sphenodon_punctatus
ENSRBIG00000041180	RTCA	100	69.903	ENSSPAG00000011938	rtca	99	67.546	Stegastes_partitus
ENSRBIG00000041180	RTCA	100	93.528	ENSSSCG00000006865	RTCA	100	91.029	Sus_scrofa
ENSRBIG00000041180	RTCA	100	82.524	ENSTGUG00000005154	RTCA	100	80.211	Taeniopygia_guttata
ENSRBIG00000041180	RTCA	100	70.550	ENSTRUG00000008799	rtca	100	68.074	Takifugu_rubripes
ENSRBIG00000041180	RTCA	100	70.550	ENSTNIG00000004725	rtca	100	68.865	Tetraodon_nigroviridis
ENSRBIG00000041180	RTCA	60	90.000	ENSTBEG00000000943	RTCA	82	67.227	Tupaia_belangeri
ENSRBIG00000041180	RTCA	100	93.404	ENSTTRG00000015327	RTCA	100	93.404	Tursiops_truncatus
ENSRBIG00000041180	RTCA	93	91.259	ENSUAMG00000017265	RTCA	96	88.483	Ursus_americanus
ENSRBIG00000041180	RTCA	100	93.528	ENSUMAG00000007881	RTCA	100	90.501	Ursus_maritimus
ENSRBIG00000041180	RTCA	100	84.466	ENSVPAG00000001039	RTCA	87	84.545	Vicugna_pacos
ENSRBIG00000041180	RTCA	100	93.851	ENSVVUG00000022041	RTCA	68	91.029	Vulpes_vulpes
ENSRBIG00000041180	RTCA	99	62.379	ENSXETG00000031661	RTCA	99	62.368	Xenopus_tropicalis
ENSRBIG00000041180	RTCA	100	60.518	ENSXCOG00000008002	rtca	100	59.894	Xiphophorus_couchianus
ENSRBIG00000041180	RTCA	100	71.521	ENSXMAG00000005482	rtca	99	68.865	Xiphophorus_maculatus