EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000041230 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 7314 bases
Position: chrMCGX01004319.1:234610-241923
Accession: 108534813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000035126	PseudoU_synth_2	PF00849.22	1.8e-20	1	1
ENSRBIP00000035131	PseudoU_synth_2	PF00849.22	3.9e-19	1	1
ENSRBIP00000035127	PseudoU_synth_2	PF00849.22	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000059122	RPUSD3-203	639	-	ENSRBIP00000035131	212 (aa)	-	A0A2K6MH60
ENSRBIT00000059119	RPUSD3-202	1011	-	ENSRBIP00000035127	336 (aa)	-	A0A2K6MH99
ENSRBIT00000059117	RPUSD3-201	1268	XM_017880353	ENSRBIP00000035126	351 (aa)	XP_017735842	A0A2K6MH57

Gene Model

Click here to download ENSRBIG00000041230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000041230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000041230	RPUSD3	79	30.104	ENSRBIG00000034842	RPUSD4	72	30.104

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000041230	RPUSD3	100	94.340	ENSG00000156990	RPUSD3	100	94.340	Homo_sapiens
ENSRBIG00000041230	RPUSD3	99	80.516	ENSAMEG00000016227	RPUSD3	99	80.516	Ailuropoda_melanoleuca
ENSRBIG00000041230	RPUSD3	83	57.386	ENSACAG00000009836	RPUSD3	81	56.690	Anolis_carolinensis
ENSRBIG00000041230	RPUSD3	91	89.637	ENSANAG00000019945	-	79	89.848	Aotus_nancymaae
ENSRBIG00000041230	RPUSD3	99	82.297	ENSANAG00000038118	-	98	82.297	Aotus_nancymaae
ENSRBIG00000041230	RPUSD3	99	65.714	ENSANAG00000007127	-	100	65.714	Aotus_nancymaae
ENSRBIG00000041230	RPUSD3	95	84.653	ENSBTAG00000007968	RPUSD3	99	81.871	Bos_taurus
ENSRBIG00000041230	RPUSD3	99	80.571	ENSCAFG00000029733	RPUSD3	99	80.571	Canis_familiaris
ENSRBIG00000041230	RPUSD3	99	80.571	ENSCAFG00020008582	RPUSD3	99	80.571	Canis_lupus_dingo
ENSRBIG00000041230	RPUSD3	95	84.158	ENSCHIG00000026027	RPUSD3	98	82.544	Capra_hircus
ENSRBIG00000041230	RPUSD3	95	83.230	ENSTSYG00000009994	RPUSD3	96	83.230	Carlito_syrichta
ENSRBIG00000041230	RPUSD3	74	83.077	ENSCAPG00000017559	RPUSD3	98	83.077	Cavia_aperea
ENSRBIG00000041230	RPUSD3	93	67.692	ENSCPOG00000037956	RPUSD3	86	71.951	Cavia_porcellus
ENSRBIG00000041230	RPUSD3	100	91.038	ENSCCAG00000029530	RPUSD3	100	91.038	Cebus_capucinus
ENSRBIG00000041230	RPUSD3	100	98.585	ENSCATG00000036939	RPUSD3	100	98.585	Cercocebus_atys
ENSRBIG00000041230	RPUSD3	100	96.866	ENSCSAG00000010506	RPUSD3	100	96.866	Chlorocebus_sabaeus
ENSRBIG00000041230	RPUSD3	53	85.714	ENSCHOG00000010151	-	65	86.667	Choloepus_hoffmanni
ENSRBIG00000041230	RPUSD3	73	55.466	ENSCPBG00000008825	RPUSD3	95	55.642	Chrysemys_picta_bellii
ENSRBIG00000041230	RPUSD3	100	99.057	ENSCANG00000040711	RPUSD3	100	99.057	Colobus_angolensis_palliatus
ENSRBIG00000041230	RPUSD3	99	73.199	ENSCGRG00001004923	Rpusd3	96	73.199	Cricetulus_griseus_chok1gshd
ENSRBIG00000041230	RPUSD3	95	74.777	ENSCGRG00000018315	Rpusd3	98	74.777	Cricetulus_griseus_crigri
ENSRBIG00000041230	RPUSD3	99	76.571	ENSDNOG00000039160	RPUSD3	93	76.571	Dasypus_novemcinctus
ENSRBIG00000041230	RPUSD3	97	63.664	ENSDORG00000026827	Rpusd3	92	77.612	Dipodomys_ordii
ENSRBIG00000041230	RPUSD3	99	72.571	ENSETEG00000006538	RPUSD3	99	72.779	Echinops_telfairi
ENSRBIG00000041230	RPUSD3	81	36.782	ENSEBUG00000015605	RPUSD3	67	38.835	Eptatretus_burgeri
ENSRBIG00000041230	RPUSD3	99	81.948	ENSEASG00005014160	RPUSD3	97	81.948	Equus_asinus_asinus
ENSRBIG00000041230	RPUSD3	99	83.381	ENSECAG00000019988	RPUSD3	97	83.381	Equus_caballus
ENSRBIG00000041230	RPUSD3	95	58.065	ENSEEUG00000007353	RPUSD3	96	58.065	Erinaceus_europaeus
ENSRBIG00000041230	RPUSD3	99	80.571	ENSFCAG00000014199	RPUSD3	99	80.571	Felis_catus
ENSRBIG00000041230	RPUSD3	78	49.275	ENSFALG00000012968	RPUSD3	99	46.739	Ficedula_albicollis
ENSRBIG00000041230	RPUSD3	74	84.674	ENSFDAG00000008350	RPUSD3	80	84.674	Fukomys_damarensis
ENSRBIG00000041230	RPUSD3	75	55.133	ENSGAGG00000007493	RPUSD3	82	56.061	Gopherus_agassizii
ENSRBIG00000041230	RPUSD3	100	95.283	ENSGGOG00000013120	RPUSD3	100	95.283	Gorilla_gorilla
ENSRBIG00000041230	RPUSD3	87	79.891	ENSHGLG00000011722	RPUSD3	97	68.966	Heterocephalus_glaber_female
ENSRBIG00000041230	RPUSD3	87	79.891	ENSHGLG00100016038	RPUSD3	97	68.966	Heterocephalus_glaber_male
ENSRBIG00000041230	RPUSD3	95	83.168	ENSSTOG00000002125	RPUSD3	99	78.223	Ictidomys_tridecemlineatus
ENSRBIG00000041230	RPUSD3	95	74.757	ENSJJAG00000012679	Rpusd3	98	74.481	Jaculus_jaculus
ENSRBIG00000041230	RPUSD3	94	84.000	ENSLAFG00000017501	RPUSD3	98	81.845	Loxodonta_africana
ENSRBIG00000041230	RPUSD3	100	96.296	ENSMFAG00000032407	RPUSD3	100	96.296	Macaca_fascicularis
ENSRBIG00000041230	RPUSD3	100	96.429	ENSMMUG00000010628	RPUSD3	100	96.429	Macaca_mulatta
ENSRBIG00000041230	RPUSD3	100	96.011	ENSMNEG00000040308	RPUSD3	100	96.011	Macaca_nemestrina
ENSRBIG00000041230	RPUSD3	100	99.057	ENSMLEG00000033940	RPUSD3	100	99.057	Mandrillus_leucophaeus
ENSRBIG00000041230	RPUSD3	94	76.418	ENSMAUG00000015473	Rpusd3	97	76.418	Mesocricetus_auratus
ENSRBIG00000041230	RPUSD3	99	83.886	ENSMICG00000002315	RPUSD3	98	83.886	Microcebus_murinus
ENSRBIG00000041230	RPUSD3	95	73.887	ENSMOCG00000022613	Rpusd3	98	73.887	Microtus_ochrogaster
ENSRBIG00000041230	RPUSD3	95	56.587	ENSMODG00000005210	RPUSD3	87	56.587	Monodelphis_domestica
ENSRBIG00000041230	RPUSD3	97	73.314	MGP_CAROLIEiJ_G0028725	Rpusd3	99	73.314	Mus_caroli
ENSRBIG00000041230	RPUSD3	97	73.607	ENSMUSG00000051169	Rpusd3	99	73.607	Mus_musculus
ENSRBIG00000041230	RPUSD3	97	73.900	MGP_PahariEiJ_G0022476	Rpusd3	99	73.900	Mus_pahari
ENSRBIG00000041230	RPUSD3	97	73.314	MGP_SPRETEiJ_G0029753	Rpusd3	99	73.314	Mus_spretus
ENSRBIG00000041230	RPUSD3	99	78.223	ENSMPUG00000017132	RPUSD3	99	78.223	Mustela_putorius_furo
ENSRBIG00000041230	RPUSD3	97	84.211	ENSMLUG00000006135	RPUSD3	98	84.211	Myotis_lucifugus
ENSRBIG00000041230	RPUSD3	97	75.073	ENSNGAG00000023704	Rpusd3	99	75.073	Nannospalax_galili
ENSRBIG00000041230	RPUSD3	100	95.283	ENSNLEG00000004214	RPUSD3	100	95.283	Nomascus_leucogenys
ENSRBIG00000041230	RPUSD3	74	67.433	ENSMEUG00000013098	-	100	67.433	Notamacropus_eugenii
ENSRBIG00000041230	RPUSD3	98	63.006	ENSOPRG00000002300	RPUSD3	98	63.006	Ochotona_princeps
ENSRBIG00000041230	RPUSD3	74	81.609	ENSODEG00000018137	RPUSD3	90	81.609	Octodon_degus
ENSRBIG00000041230	RPUSD3	84	53.371	ENSOANG00000012081	-	99	51.930	Ornithorhynchus_anatinus
ENSRBIG00000041230	RPUSD3	89	79.474	ENSOCUG00000027885	RPUSD3	99	67.529	Oryctolagus_cuniculus
ENSRBIG00000041230	RPUSD3	95	84.236	ENSOGAG00000012592	RPUSD3	99	85.161	Otolemur_garnettii
ENSRBIG00000041230	RPUSD3	95	86.634	ENSOARG00000005928	RPUSD3	99	82.808	Ovis_aries
ENSRBIG00000041230	RPUSD3	100	94.340	ENSPPAG00000038083	RPUSD3	100	94.340	Pan_paniscus
ENSRBIG00000041230	RPUSD3	99	80.571	ENSPPRG00000024433	RPUSD3	99	80.571	Panthera_pardus
ENSRBIG00000041230	RPUSD3	99	81.194	ENSPTIG00000006828	RPUSD3	98	82.789	Panthera_tigris_altaica
ENSRBIG00000041230	RPUSD3	100	95.283	ENSPTRG00000051760	RPUSD3	100	95.283	Pan_troglodytes
ENSRBIG00000041230	RPUSD3	100	99.057	ENSPANG00000023885	RPUSD3	100	99.057	Papio_anubis
ENSRBIG00000041230	RPUSD3	95	74.777	ENSPEMG00000017245	Rpusd3	98	74.777	Peromyscus_maniculatus_bairdii
ENSRBIG00000041230	RPUSD3	85	64.835	ENSPCIG00000021901	RPUSD3	84	64.483	Phascolarctos_cinereus
ENSRBIG00000041230	RPUSD3	100	92.308	ENSPPYG00000013676	RPUSD3	100	92.308	Pongo_abelii
ENSRBIG00000041230	RPUSD3	95	59.406	ENSPCAG00000013731	-	100	60.900	Procavia_capensis
ENSRBIG00000041230	RPUSD3	99	86.571	ENSPCOG00000018314	RPUSD3	99	86.571	Propithecus_coquereli
ENSRBIG00000041230	RPUSD3	95	84.653	ENSPVAG00000011107	RPUSD3	99	79.943	Pteropus_vampyrus
ENSRBIG00000041230	RPUSD3	97	72.086	ENSRNOG00000009084	Rpusd3	99	72.086	Rattus_norvegicus
ENSRBIG00000041230	RPUSD3	100	100.000	ENSRROG00000043328	RPUSD3	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000041230	RPUSD3	100	88.604	ENSSBOG00000036106	RPUSD3	100	88.604	Saimiri_boliviensis_boliviensis
ENSRBIG00000041230	RPUSD3	95	58.416	ENSSHAG00000015536	RPUSD3	99	59.677	Sarcophilus_harrisii
ENSRBIG00000041230	RPUSD3	100	80.114	ENSSSCG00000011555	RPUSD3	99	80.571	Sus_scrofa
ENSRBIG00000041230	RPUSD3	73	46.452	ENSTGUG00000008744	RPUSD3	93	49.770	Taeniopygia_guttata
ENSRBIG00000041230	RPUSD3	95	82.673	ENSTBEG00000000176	RPUSD3	100	79.239	Tupaia_belangeri
ENSRBIG00000041230	RPUSD3	100	80.966	ENSTTRG00000007544	RPUSD3	99	81.429	Tursiops_truncatus
ENSRBIG00000041230	RPUSD3	96	81.463	ENSUAMG00000011354	RPUSD3	97	82.903	Ursus_americanus
ENSRBIG00000041230	RPUSD3	99	80.286	ENSUMAG00000018830	RPUSD3	99	80.286	Ursus_maritimus
ENSRBIG00000041230	RPUSD3	99	81.604	ENSVVUG00000023735	RPUSD3	98	82.196	Vulpes_vulpes
ENSRBIG00000041230	RPUSD3	81	49.711	ENSXETG00000023546	rpusd3	99	49.645	Xenopus_tropicalis