EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000041294 (Gene tree)
Gene ID: -
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 14237 bases
Position: chrMCGX01006230.1:35686-49922
Accession: 108539560
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000035480	MBD	PF01429.19	3e-16	1	1
ENSRBIP00000035469	MBD	PF01429.19	3.5e-16	1	1
ENSRBIP00000035446	MBD	PF01429.19	4.1e-16	1	1
ENSRBIP00000035421	MBD	PF01429.19	4.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000059466	MBD1-203	1776	XM_017888328	ENSRBIP00000035469	591 (aa)	XP_017743817	A0A2K6MI53
ENSRBIT00000059417	MBD1-201	1704	XM_017888334	ENSRBIP00000035421	567 (aa)	XP_017743823	A0A2K6MI07
ENSRBIT00000059443	MBD1-202	4749	XM_017888333	ENSRBIP00000035446	556 (aa)	XP_017743822	A0A2K6MI23
ENSRBIT00000059477	MBD1-204	1584	XM_017888339	ENSRBIP00000035480	527 (aa)	XP_017743828	A0A2K6MI97

Gene Model

Click here to download ENSRBIG00000041294's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000041294's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000041294	MBD1	100	99.281	ENSG00000141644	MBD1	100	99.281	Homo_sapiens
ENSRBIG00000041294	MBD1	100	81.171	ENSAMEG00000000238	MBD1	96	80.538	Ailuropoda_melanoleuca
ENSRBIG00000041294	MBD1	62	41.990	ENSACAG00000006091	-	100	41.606	Anolis_carolinensis
ENSRBIG00000041294	MBD1	99	93.393	ENSANAG00000036253	MBD1	97	93.393	Aotus_nancymaae
ENSRBIG00000041294	MBD1	100	80.507	ENSBTAG00000003801	MBD1	100	80.666	Bos_taurus
ENSRBIG00000041294	MBD1	100	94.366	ENSCJAG00000004959	MBD1	100	94.366	Callithrix_jacchus
ENSRBIG00000041294	MBD1	100	80.032	ENSCAFG00000018928	MBD1	96	80.824	Canis_familiaris
ENSRBIG00000041294	MBD1	99	79.133	ENSCAFG00020024272	MBD1	97	79.936	Canis_lupus_dingo
ENSRBIG00000041294	MBD1	100	80.190	ENSCHIG00000021134	MBD1	100	80.349	Capra_hircus
ENSRBIG00000041294	MBD1	98	90.257	ENSTSYG00000000509	MBD1	97	89.292	Carlito_syrichta
ENSRBIG00000041294	MBD1	98	63.538	ENSCAPG00000015782	MBD1	96	62.590	Cavia_aperea
ENSRBIG00000041294	MBD1	100	73.623	ENSCPOG00000001671	MBD1	100	73.623	Cavia_porcellus
ENSRBIG00000041294	MBD1	100	86.224	ENSCCAG00000034600	MBD1	100	85.366	Cebus_capucinus
ENSRBIG00000041294	MBD1	100	99.101	ENSCATG00000029959	MBD1	100	99.101	Cercocebus_atys
ENSRBIG00000041294	MBD1	100	78.730	ENSCLAG00000007457	MBD1	89	78.730	Chinchilla_lanigera
ENSRBIG00000041294	MBD1	100	91.405	ENSCSAG00000018070	MBD1	100	89.048	Chlorocebus_sabaeus
ENSRBIG00000041294	MBD1	100	99.101	ENSCANG00000033425	MBD1	100	99.101	Colobus_angolensis_palliatus
ENSRBIG00000041294	MBD1	100	67.980	ENSCGRG00001014843	Mbd1	100	67.980	Cricetulus_griseus_chok1gshd
ENSRBIG00000041294	MBD1	98	61.278	ENSCGRG00000014135	Mbd1	96	61.017	Cricetulus_griseus_crigri
ENSRBIG00000041294	MBD1	100	75.594	ENSDNOG00000015998	MBD1	100	76.862	Dasypus_novemcinctus
ENSRBIG00000041294	MBD1	98	67.138	ENSDORG00000013917	Mbd1	97	75.000	Dipodomys_ordii
ENSRBIG00000041294	MBD1	100	85.305	ENSEASG00005003857	MBD1	100	87.097	Equus_asinus_asinus
ENSRBIG00000041294	MBD1	100	78.418	ENSECAG00000011497	MBD1	80	80.066	Equus_caballus
ENSRBIG00000041294	MBD1	100	87.276	ENSFCAG00000015730	MBD1	100	86.738	Felis_catus
ENSRBIG00000041294	MBD1	99	74.153	ENSFDAG00000011085	MBD1	95	79.717	Fukomys_damarensis
ENSRBIG00000041294	MBD1	54	52.308	ENSGAFG00000008975	mbd1b	50	33.085	Gambusia_affinis
ENSRBIG00000041294	MBD1	62	31.688	ENSGACG00000012106	-	58	33.983	Gasterosteus_aculeatus
ENSRBIG00000041294	MBD1	99	98.587	ENSGGOG00000016966	MBD1	99	98.587	Gorilla_gorilla
ENSRBIG00000041294	MBD1	100	79.048	ENSHGLG00000008740	MBD1	100	79.048	Heterocephalus_glaber_female
ENSRBIG00000041294	MBD1	100	72.125	ENSHGLG00100005198	MBD1	100	74.919	Heterocephalus_glaber_male
ENSRBIG00000041294	MBD1	61	30.769	ENSIPUG00000015243	-	50	50.602	Ictalurus_punctatus
ENSRBIG00000041294	MBD1	100	75.610	ENSSTOG00000007780	MBD1	100	75.935	Ictidomys_tridecemlineatus
ENSRBIG00000041294	MBD1	98	67.021	ENSJJAG00000022859	Mbd1	96	65.580	Jaculus_jaculus
ENSRBIG00000041294	MBD1	62	39.084	ENSLACG00000002414	-	58	37.838	Latimeria_chalumnae
ENSRBIG00000041294	MBD1	99	68.988	ENSLAFG00000031328	MBD1	97	68.988	Loxodonta_africana
ENSRBIG00000041294	MBD1	100	98.921	ENSMFAG00000026335	MBD1	100	98.921	Macaca_fascicularis
ENSRBIG00000041294	MBD1	99	98.763	ENSMMUG00000009050	MBD1	99	98.763	Macaca_mulatta
ENSRBIG00000041294	MBD1	100	98.921	ENSMNEG00000038822	MBD1	100	98.921	Macaca_nemestrina
ENSRBIG00000041294	MBD1	100	99.281	ENSMLEG00000043121	MBD1	100	99.281	Mandrillus_leucophaeus
ENSRBIG00000041294	MBD1	53	51.111	ENSMAMG00000023341	-	51	59.155	Mastacembelus_armatus
ENSRBIG00000041294	MBD1	98	89.011	ENSMICG00000006414	MBD1	100	88.889	Microcebus_murinus
ENSRBIG00000041294	MBD1	62	43.590	ENSMODG00000001286	-	58	43.846	Monodelphis_domestica
ENSRBIG00000041294	MBD1	99	60.890	ENSMUSG00000024561	Mbd1	97	61.306	Mus_musculus
ENSRBIG00000041294	MBD1	100	61.367	MGP_PahariEiJ_G0019128	Mbd1	100	61.208	Mus_pahari
ENSRBIG00000041294	MBD1	98	62.237	MGP_SPRETEiJ_G0023304	Mbd1	99	62.500	Mus_spretus
ENSRBIG00000041294	MBD1	100	80.380	ENSMPUG00000008843	MBD1	96	76.324	Mustela_putorius_furo
ENSRBIG00000041294	MBD1	100	78.730	ENSMLUG00000008286	MBD1	96	78.730	Myotis_lucifugus
ENSRBIG00000041294	MBD1	98	65.679	ENSNGAG00000011412	Mbd1	96	62.500	Nannospalax_galili
ENSRBIG00000041294	MBD1	98	80.651	ENSNLEG00000032711	-	88	80.651	Nomascus_leucogenys
ENSRBIG00000041294	MBD1	100	98.561	ENSNLEG00000011661	-	100	98.561	Nomascus_leucogenys
ENSRBIG00000041294	MBD1	100	66.942	ENSOPRG00000007647	MBD1	100	66.942	Ochotona_princeps
ENSRBIG00000041294	MBD1	93	80.093	ENSODEG00000018451	MBD1	97	80.093	Octodon_degus
ENSRBIG00000041294	MBD1	84	41.860	ENSOANG00000014593	-	100	42.029	Ornithorhynchus_anatinus
ENSRBIG00000041294	MBD1	100	77.338	ENSOCUG00000006554	MBD1	100	74.571	Oryctolagus_cuniculus
ENSRBIG00000041294	MBD1	100	80.781	ENSOGAG00000003784	MBD1	96	80.781	Otolemur_garnettii
ENSRBIG00000041294	MBD1	100	79.905	ENSOARG00000004218	MBD1	95	80.063	Ovis_aries
ENSRBIG00000041294	MBD1	98	99.079	ENSPPAG00000038886	MBD1	100	91.074	Pan_paniscus
ENSRBIG00000041294	MBD1	100	87.455	ENSPPRG00000021387	MBD1	100	86.918	Panthera_pardus
ENSRBIG00000041294	MBD1	98	86.972	ENSPTIG00000021231	MBD1	100	85.231	Panthera_tigris_altaica
ENSRBIG00000041294	MBD1	99	98.763	ENSPTRG00000010021	MBD1	99	98.763	Pan_troglodytes
ENSRBIG00000041294	MBD1	99	99.117	ENSPANG00000010867	MBD1	99	99.117	Papio_anubis
ENSRBIG00000041294	MBD1	98	57.565	ENSPEMG00000022630	Mbd1	97	53.808	Peromyscus_maniculatus_bairdii
ENSRBIG00000041294	MBD1	96	43.802	ENSPCIG00000027937	-	79	43.046	Phascolarctos_cinereus
ENSRBIG00000041294	MBD1	54	53.846	ENSPFOG00000007511	mbd1b	50	33.085	Poecilia_formosa
ENSRBIG00000041294	MBD1	54	53.846	ENSPLAG00000021258	mbd1b	50	33.085	Poecilia_latipinna
ENSRBIG00000041294	MBD1	54	53.846	ENSPMEG00000024145	mbd1b	50	32.587	Poecilia_mexicana
ENSRBIG00000041294	MBD1	54	53.846	ENSPREG00000021805	mbd1b	50	33.085	Poecilia_reticulata
ENSRBIG00000041294	MBD1	100	91.074	ENSPPYG00000009158	MBD1	91	88.730	Pongo_abelii
ENSRBIG00000041294	MBD1	99	68.430	ENSPCAG00000001648	MBD1	93	77.152	Procavia_capensis
ENSRBIG00000041294	MBD1	98	90.018	ENSPCOG00000012450	MBD1	100	91.111	Propithecus_coquereli
ENSRBIG00000041294	MBD1	98	53.721	ENSRNOG00000024104	Mbd1	96	60.596	Rattus_norvegicus
ENSRBIG00000041294	MBD1	100	100.000	ENSRROG00000032517	MBD1	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000041294	MBD1	98	95.396	ENSSBOG00000027169	MBD1	100	86.934	Saimiri_boliviensis_boliviensis
ENSRBIG00000041294	MBD1	76	42.236	ENSSHAG00000003661	-	100	43.791	Sarcophilus_harrisii
ENSRBIG00000041294	MBD1	66	31.555	ENSSPAG00000021447	mbd1b	51	32.412	Stegastes_partitus
ENSRBIG00000041294	MBD1	99	83.029	ENSSSCG00000004516	MBD1	97	82.267	Sus_scrofa
ENSRBIG00000041294	MBD1	50	50.538	ENSTRUG00000013422	mbd1b	50	31.026	Takifugu_rubripes
ENSRBIG00000041294	MBD1	74	83.333	ENSTBEG00000012651	-	68	83.333	Tupaia_belangeri
ENSRBIG00000041294	MBD1	100	76.606	ENSTTRG00000015523	MBD1	100	75.947	Tursiops_truncatus
ENSRBIG00000041294	MBD1	100	75.083	ENSUAMG00000004752	MBD1	100	75.908	Ursus_americanus
ENSRBIG00000041294	MBD1	100	79.736	ENSUMAG00000002947	MBD1	100	79.077	Ursus_maritimus