EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000041414 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 3017 bases
Position: chrMCGX01004013.1:4527470-4530486
Accession: 108533396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000035568	RRM_1	PF00076.22	1.5e-32	1	2
ENSRBIP00000035568	RRM_1	PF00076.22	1.5e-32	2	2
ENSRBIP00000035569	RRM_1	PF00076.22	3.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000059566	SRSF6-201	1017	XM_017878049	ENSRBIP00000035568	338 (aa)	XP_017733538	A0A2K6MIG3
ENSRBIT00000059567	SRSF6-202	393	-	ENSRBIP00000035569	130 (aa)	-	A0A2K6MIF9

Gene Model

Click here to download ENSRBIG00000041414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000041414's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000041414	SRSF6	55	36.709	ENSRBIG00000042033	-	82	37.500
ENSRBIG00000041414	SRSF6	74	30.928	ENSRBIG00000043267	RBM14	52	34.667
ENSRBIG00000041414	SRSF6	52	71.642	ENSRBIG00000013003	SRSF5	86	62.712
ENSRBIG00000041414	SRSF6	51	47.887	ENSRBIG00000034445	-	77	50.000
ENSRBIG00000041414	SRSF6	58	46.835	ENSRBIG00000036836	SRSF3	64	46.835
ENSRBIG00000041414	SRSF6	58	34.667	ENSRBIG00000019394	RBM4B	52	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000041414	SRSF6	100	97.674	ENSG00000124193	SRSF6	100	97.674	Homo_sapiens
ENSRBIG00000041414	SRSF6	60	93.590	ENSAPOG00000016635	-	84	78.676	Acanthochromis_polyacanthus
ENSRBIG00000041414	SRSF6	94	84.000	ENSAMEG00000003710	SRSF6	93	84.830	Ailuropoda_melanoleuca
ENSRBIG00000041414	SRSF6	86	66.780	ENSACIG00000023658	-	56	88.827	Amphilophus_citrinellus
ENSRBIG00000041414	SRSF6	62	88.750	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSRBIG00000041414	SRSF6	62	87.500	ENSAOCG00000004309	-	57	84.444	Amphiprion_ocellaris
ENSRBIG00000041414	SRSF6	92	71.429	ENSAOCG00000019438	-	98	70.588	Amphiprion_ocellaris
ENSRBIG00000041414	SRSF6	98	61.151	ENSAPEG00000013086	-	53	87.097	Amphiprion_percula
ENSRBIG00000041414	SRSF6	62	86.250	ENSAPEG00000020746	-	66	79.787	Amphiprion_percula
ENSRBIG00000041414	SRSF6	65	84.524	ENSATEG00000007255	-	71	78.378	Anabas_testudineus
ENSRBIG00000041414	SRSF6	60	94.872	ENSACAG00000002061	SRSF6	92	82.500	Anolis_carolinensis
ENSRBIG00000041414	SRSF6	100	96.802	ENSANAG00000024080	SRSF6	100	96.802	Aotus_nancymaae
ENSRBIG00000041414	SRSF6	56	89.041	ENSACLG00000024373	-	89	83.529	Astatotilapia_calliptera
ENSRBIG00000041414	SRSF6	57	93.243	ENSAMXG00000003101	-	51	84.211	Astyanax_mexicanus
ENSRBIG00000041414	SRSF6	57	91.892	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSRBIG00000041414	SRSF6	100	95.942	ENSBTAG00000008527	SRSF6	100	95.942	Bos_taurus
ENSRBIG00000041414	SRSF6	100	96.296	ENSCJAG00000048403	SRSF6	99	97.761	Callithrix_jacchus
ENSRBIG00000041414	SRSF6	100	95.652	ENSCAFG00000009289	SRSF6	100	95.652	Canis_familiaris
ENSRBIG00000041414	SRSF6	100	95.652	ENSCAFG00020013559	SRSF6	100	95.652	Canis_lupus_dingo
ENSRBIG00000041414	SRSF6	100	95.362	ENSCHIG00000009148	-	100	95.362	Capra_hircus
ENSRBIG00000041414	SRSF6	100	95.942	ENSCHIG00000015890	-	100	95.942	Capra_hircus
ENSRBIG00000041414	SRSF6	100	83.824	ENSTSYG00000026476	SRSF6	100	83.824	Carlito_syrichta
ENSRBIG00000041414	SRSF6	100	96.296	ENSCPOG00000011761	SRSF6	100	96.296	Cavia_porcellus
ENSRBIG00000041414	SRSF6	100	97.093	ENSCCAG00000026018	-	100	97.093	Cebus_capucinus
ENSRBIG00000041414	SRSF6	94	66.967	ENSCCAG00000018540	-	62	82.447	Cebus_capucinus
ENSRBIG00000041414	SRSF6	100	97.668	ENSCATG00000030794	SRSF6	100	97.668	Cercocebus_atys
ENSRBIG00000041414	SRSF6	100	96.296	ENSCLAG00000010247	SRSF6	100	96.296	Chinchilla_lanigera
ENSRBIG00000041414	SRSF6	100	97.668	ENSCSAG00000014022	SRSF6	100	97.668	Chlorocebus_sabaeus
ENSRBIG00000041414	SRSF6	87	100.000	ENSCHOG00000000561	SRSF6	86	100.000	Choloepus_hoffmanni
ENSRBIG00000041414	SRSF6	62	97.500	ENSCPBG00000018200	SRSF6	93	82.353	Chrysemys_picta_bellii
ENSRBIG00000041414	SRSF6	100	97.376	ENSCANG00000037774	-	100	97.376	Colobus_angolensis_palliatus
ENSRBIG00000041414	SRSF6	100	85.799	ENSCANG00000042529	-	100	85.799	Colobus_angolensis_palliatus
ENSRBIG00000041414	SRSF6	100	94.815	ENSCGRG00001022339	Srsf6	100	94.815	Cricetulus_griseus_chok1gshd
ENSRBIG00000041414	SRSF6	63	95.794	ENSCGRG00000006618	Srsf6	100	95.794	Cricetulus_griseus_crigri
ENSRBIG00000041414	SRSF6	60	93.590	ENSCSEG00000019778	SRSF6	90	87.705	Cynoglossus_semilaevis
ENSRBIG00000041414	SRSF6	60	92.308	ENSCVAG00000001863	SRSF6	95	87.805	Cyprinodon_variegatus
ENSRBIG00000041414	SRSF6	57	90.541	ENSDARG00000016783	srsf6b	84	91.250	Danio_rerio
ENSRBIG00000041414	SRSF6	94	91.667	ENSDNOG00000008410	SRSF6	93	93.168	Dasypus_novemcinctus
ENSRBIG00000041414	SRSF6	100	96.296	ENSDORG00000028378	Srsf6	100	96.296	Dipodomys_ordii
ENSRBIG00000041414	SRSF6	93	92.476	ENSETEG00000006221	SRSF6	93	90.654	Echinops_telfairi
ENSRBIG00000041414	SRSF6	100	95.072	ENSEASG00005023429	SRSF6	100	95.072	Equus_asinus_asinus
ENSRBIG00000041414	SRSF6	100	95.072	ENSECAG00000023932	SRSF6	100	95.072	Equus_caballus
ENSRBIG00000041414	SRSF6	57	94.359	ENSEEUG00000002324	SRSF6	89	94.872	Erinaceus_europaeus
ENSRBIG00000041414	SRSF6	62	88.750	ENSELUG00000013506	SRSF6	71	88.750	Esox_lucius
ENSRBIG00000041414	SRSF6	67	84.091	ENSELUG00000024182	SRSF6	90	80.488	Esox_lucius
ENSRBIG00000041414	SRSF6	100	95.652	ENSFCAG00000032814	SRSF6	100	95.652	Felis_catus
ENSRBIG00000041414	SRSF6	94	82.759	ENSFDAG00000012191	SRSF6	93	81.388	Fukomys_damarensis
ENSRBIG00000041414	SRSF6	61	78.481	ENSGMOG00000006105	srsf6a	62	71.839	Gadus_morhua
ENSRBIG00000041414	SRSF6	58	90.789	ENSGMOG00000014458	srsf6a	52	77.604	Gadus_morhua
ENSRBIG00000041414	SRSF6	100	94.074	ENSGALG00000000990	SRSF6	100	94.074	Gallus_gallus
ENSRBIG00000041414	SRSF6	60	92.308	ENSGAFG00000019088	-	72	78.400	Gambusia_affinis
ENSRBIG00000041414	SRSF6	62	90.000	ENSGACG00000006084	srsf6a	53	82.796	Gasterosteus_aculeatus
ENSRBIG00000041414	SRSF6	62	97.500	ENSGAGG00000003238	SRSF6	93	82.353	Gopherus_agassizii
ENSRBIG00000041414	SRSF6	100	97.674	ENSGGOG00000009808	SRSF6	100	97.674	Gorilla_gorilla
ENSRBIG00000041414	SRSF6	58	89.474	ENSHBUG00000006386	-	58	84.444	Haplochromis_burtoni
ENSRBIG00000041414	SRSF6	100	96.296	ENSHGLG00000007348	SRSF6	100	96.296	Heterocephalus_glaber_female
ENSRBIG00000041414	SRSF6	91	74.441	ENSHGLG00000007701	-	58	75.275	Heterocephalus_glaber_female
ENSRBIG00000041414	SRSF6	94	83.072	ENSHGLG00100005043	SRSF6	93	81.703	Heterocephalus_glaber_male
ENSRBIG00000041414	SRSF6	60	89.744	ENSHCOG00000002740	srsf6a	57	86.592	Hippocampus_comes
ENSRBIG00000041414	SRSF6	60	92.308	ENSIPUG00000004776	-	72	74.236	Ictalurus_punctatus
ENSRBIG00000041414	SRSF6	100	96.501	ENSSTOG00000010866	SRSF6	100	96.501	Ictidomys_tridecemlineatus
ENSRBIG00000041414	SRSF6	57	95.812	ENSJJAG00000020690	Srsf6	90	95.812	Jaculus_jaculus
ENSRBIG00000041414	SRSF6	56	93.151	ENSKMAG00000011934	srsf6a	59	88.268	Kryptolebias_marmoratus
ENSRBIG00000041414	SRSF6	60	92.308	ENSLBEG00000007356	srsf6a	52	84.946	Labrus_bergylta
ENSRBIG00000041414	SRSF6	89	81.290	ENSLACG00000005466	SRSF6	54	86.957	Latimeria_chalumnae
ENSRBIG00000041414	SRSF6	70	94.979	ENSLAFG00000006682	SRSF6	88	95.154	Loxodonta_africana
ENSRBIG00000041414	SRSF6	100	97.668	ENSMFAG00000036925	SRSF6	100	97.668	Macaca_fascicularis
ENSRBIG00000041414	SRSF6	100	97.668	ENSMMUG00000006742	SRSF6	100	97.668	Macaca_mulatta
ENSRBIG00000041414	SRSF6	100	96.210	ENSMNEG00000038270	-	100	96.210	Macaca_nemestrina
ENSRBIG00000041414	SRSF6	100	97.085	ENSMNEG00000027392	-	100	97.085	Macaca_nemestrina
ENSRBIG00000041414	SRSF6	63	98.598	ENSMLEG00000031524	SRSF6	100	98.598	Mandrillus_leucophaeus
ENSRBIG00000041414	SRSF6	98	60.432	ENSMAMG00000017161	srsf6a	53	86.559	Mastacembelus_armatus
ENSRBIG00000041414	SRSF6	62	88.750	ENSMAMG00000023477	-	86	88.750	Mastacembelus_armatus
ENSRBIG00000041414	SRSF6	65	83.529	ENSMZEG00005020658	-	60	85.227	Maylandia_zebra
ENSRBIG00000041414	SRSF6	58	89.474	ENSMZEG00005008032	-	57	84.444	Maylandia_zebra
ENSRBIG00000041414	SRSF6	100	94.815	ENSMAUG00000019086	-	100	94.815	Mesocricetus_auratus
ENSRBIG00000041414	SRSF6	100	96.296	ENSMICG00000008537	SRSF6	100	96.296	Microcebus_murinus
ENSRBIG00000041414	SRSF6	63	95.794	ENSMOCG00000018738	Srsf6	100	95.794	Microtus_ochrogaster
ENSRBIG00000041414	SRSF6	60	92.308	ENSMMOG00000015241	-	75	92.500	Mola_mola
ENSRBIG00000041414	SRSF6	62	97.500	ENSMODG00000003107	SRSF6	94	85.358	Monodelphis_domestica
ENSRBIG00000041414	SRSF6	100	94.815	MGP_CAROLIEiJ_G0024606	Srsf6	100	94.815	Mus_caroli
ENSRBIG00000041414	SRSF6	100	94.815	ENSMUSG00000016921	Srsf6	100	94.815	Mus_musculus
ENSRBIG00000041414	SRSF6	100	94.815	MGP_PahariEiJ_G0026050	Srsf6	100	94.815	Mus_pahari
ENSRBIG00000041414	SRSF6	100	94.815	MGP_SPRETEiJ_G0025528	Srsf6	100	94.815	Mus_spretus
ENSRBIG00000041414	SRSF6	83	95.486	ENSMPUG00000017692	SRSF6	99	95.486	Mustela_putorius_furo
ENSRBIG00000041414	SRSF6	93	76.744	ENSMLUG00000016618	SRSF6	93	76.453	Myotis_lucifugus
ENSRBIG00000041414	SRSF6	100	96.296	ENSNGAG00000017560	Srsf6	100	96.296	Nannospalax_galili
ENSRBIG00000041414	SRSF6	98	61.151	ENSNBRG00000001846	-	52	86.559	Neolamprologus_brichardi
ENSRBIG00000041414	SRSF6	58	89.474	ENSNBRG00000014709	-	58	84.444	Neolamprologus_brichardi
ENSRBIG00000041414	SRSF6	100	97.674	ENSNLEG00000006524	SRSF6	100	97.674	Nomascus_leucogenys
ENSRBIG00000041414	SRSF6	62	97.500	ENSMEUG00000014615	SRSF6	62	92.553	Notamacropus_eugenii
ENSRBIG00000041414	SRSF6	70	96.653	ENSOPRG00000002017	-	88	96.916	Ochotona_princeps
ENSRBIG00000041414	SRSF6	100	96.296	ENSODEG00000016510	-	100	96.296	Octodon_degus
ENSRBIG00000041414	SRSF6	62	87.500	ENSONIG00000020247	-	53	84.530	Oreochromis_niloticus
ENSRBIG00000041414	SRSF6	70	54.772	ENSOCUG00000023999	-	70	57.386	Oryctolagus_cuniculus
ENSRBIG00000041414	SRSF6	83	80.464	ENSOCUG00000009785	-	98	82.712	Oryctolagus_cuniculus
ENSRBIG00000041414	SRSF6	60	94.872	ENSORLG00020017506	srsf6a	90	73.510	Oryzias_latipes_hni
ENSRBIG00000041414	SRSF6	62	100.000	ENSOGAG00000014468	SRSF6	93	93.789	Otolemur_garnettii
ENSRBIG00000041414	SRSF6	93	93.458	ENSOARG00000003117	SRSF6	93	93.146	Ovis_aries
ENSRBIG00000041414	SRSF6	90	86.513	ENSPPAG00000043131	-	100	86.842	Pan_paniscus
ENSRBIG00000041414	SRSF6	100	97.384	ENSPPAG00000034327	-	100	97.384	Pan_paniscus
ENSRBIG00000041414	SRSF6	100	95.652	ENSPPRG00000008917	SRSF6	100	95.652	Panthera_pardus
ENSRBIG00000041414	SRSF6	63	96.296	ENSPTIG00000019153	SRSF6	100	96.296	Panthera_tigris_altaica
ENSRBIG00000041414	SRSF6	90	86.513	ENSPTRG00000046274	-	100	86.842	Pan_troglodytes
ENSRBIG00000041414	SRSF6	100	97.384	ENSPTRG00000044686	-	100	97.384	Pan_troglodytes
ENSRBIG00000041414	SRSF6	100	97.668	ENSPANG00000035224	SRSF6	100	97.668	Papio_anubis
ENSRBIG00000041414	SRSF6	92	66.978	ENSPKIG00000018463	-	79	92.500	Paramormyrops_kingsleyae
ENSRBIG00000041414	SRSF6	60	93.590	ENSPKIG00000015603	-	88	88.618	Paramormyrops_kingsleyae
ENSRBIG00000041414	SRSF6	55	80.556	ENSPKIG00000015703	-	95	63.889	Paramormyrops_kingsleyae
ENSRBIG00000041414	SRSF6	88	70.455	ENSPMGG00000014963	srsf6a	55	88.587	Periophthalmus_magnuspinnatus
ENSRBIG00000041414	SRSF6	85	83.621	ENSPEMG00000022405	-	96	83.621	Peromyscus_maniculatus_bairdii
ENSRBIG00000041414	SRSF6	100	94.815	ENSPCIG00000003820	SRSF6	100	94.815	Phascolarctos_cinereus
ENSRBIG00000041414	SRSF6	60	92.308	ENSPFOG00000006437	srsf6a	50	82.105	Poecilia_formosa
ENSRBIG00000041414	SRSF6	60	92.308	ENSPLAG00000009243	srsf6a	80	80.315	Poecilia_latipinna
ENSRBIG00000041414	SRSF6	60	92.308	ENSPMEG00000006042	SRSF6	54	85.405	Poecilia_mexicana
ENSRBIG00000041414	SRSF6	61	91.139	ENSPREG00000001040	srsf6a	87	82.308	Poecilia_reticulata
ENSRBIG00000041414	SRSF6	100	97.674	ENSPPYG00000011019	SRSF6	100	97.674	Pongo_abelii
ENSRBIG00000041414	SRSF6	62	98.750	ENSPCAG00000010954	SRSF6	95	88.750	Procavia_capensis
ENSRBIG00000041414	SRSF6	100	96.296	ENSPCOG00000026364	SRSF6	100	96.296	Propithecus_coquereli
ENSRBIG00000041414	SRSF6	94	91.615	ENSPVAG00000015232	SRSF6	93	92.812	Pteropus_vampyrus
ENSRBIG00000041414	SRSF6	58	89.474	ENSPNYG00000004944	-	58	84.444	Pundamilia_nyererei
ENSRBIG00000041414	SRSF6	98	60.432	ENSPNYG00000011272	-	51	86.559	Pundamilia_nyererei
ENSRBIG00000041414	SRSF6	62	95.000	ENSPNAG00000023179	-	94	90.164	Pygocentrus_nattereri
ENSRBIG00000041414	SRSF6	94	93.478	ENSRNOG00000006380	Srsf6	94	94.688	Rattus_norvegicus
ENSRBIG00000041414	SRSF6	100	98.251	ENSRROG00000029989	SRSF6	100	98.251	Rhinopithecus_roxellana
ENSRBIG00000041414	SRSF6	100	96.802	ENSSBOG00000033708	-	100	96.802	Saimiri_boliviensis_boliviensis
ENSRBIG00000041414	SRSF6	93	70.219	ENSSBOG00000034078	-	54	70.588	Saimiri_boliviensis_boliviensis
ENSRBIG00000041414	SRSF6	62	97.500	ENSSHAG00000012805	SRSF6	94	85.358	Sarcophilus_harrisii
ENSRBIG00000041414	SRSF6	57	93.243	ENSSFOG00015015169	SRSF6	60	90.710	Scleropages_formosus
ENSRBIG00000041414	SRSF6	58	94.737	ENSSFOG00015019681	-	53	82.383	Scleropages_formosus
ENSRBIG00000041414	SRSF6	58	88.158	ENSSMAG00000017447	-	55	79.121	Scophthalmus_maximus
ENSRBIG00000041414	SRSF6	62	92.500	ENSSMAG00000014861	-	66	86.517	Scophthalmus_maximus
ENSRBIG00000041414	SRSF6	72	79.787	ENSSDUG00000011036	-	100	79.787	Seriola_dumerili
ENSRBIG00000041414	SRSF6	98	60.432	ENSSDUG00000016097	srsf6a	53	86.559	Seriola_dumerili
ENSRBIG00000041414	SRSF6	72	79.787	ENSSLDG00000014858	-	100	79.787	Seriola_lalandi_dorsalis
ENSRBIG00000041414	SRSF6	98	60.432	ENSSLDG00000022841	srsf6a	54	86.559	Seriola_lalandi_dorsalis
ENSRBIG00000041414	SRSF6	70	94.958	ENSSARG00000001602	SRSF6	88	94.273	Sorex_araneus
ENSRBIG00000041414	SRSF6	100	94.074	ENSSPUG00000004967	SRSF6	100	94.074	Sphenodon_punctatus
ENSRBIG00000041414	SRSF6	69	81.111	ENSSPAG00000021913	-	92	81.111	Stegastes_partitus
ENSRBIG00000041414	SRSF6	98	60.432	ENSSPAG00000002362	srsf6a	67	84.127	Stegastes_partitus
ENSRBIG00000041414	SRSF6	100	95.072	ENSSSCG00000007362	SRSF6	100	95.072	Sus_scrofa
ENSRBIG00000041414	SRSF6	93	81.115	ENSTGUG00000003455	SRSF6	93	82.769	Taeniopygia_guttata
ENSRBIG00000041414	SRSF6	63	90.244	ENSTRUG00000021397	-	89	90.244	Takifugu_rubripes
ENSRBIG00000041414	SRSF6	87	70.100	ENSTNIG00000001692	srsf6a	57	84.409	Tetraodon_nigroviridis
ENSRBIG00000041414	SRSF6	84	89.310	ENSTBEG00000013448	SRSF6	92	90.941	Tupaia_belangeri
ENSRBIG00000041414	SRSF6	76	96.525	ENSTTRG00000015410	SRSF6	100	96.525	Tursiops_truncatus
ENSRBIG00000041414	SRSF6	100	95.652	ENSUAMG00000003559	SRSF6	100	95.652	Ursus_americanus
ENSRBIG00000041414	SRSF6	63	96.296	ENSUMAG00000001154	SRSF6	100	96.296	Ursus_maritimus
ENSRBIG00000041414	SRSF6	76	100.000	ENSVPAG00000003016	SRSF6	74	100.000	Vicugna_pacos
ENSRBIG00000041414	SRSF6	100	74.815	ENSVVUG00000019276	-	100	74.815	Vulpes_vulpes
ENSRBIG00000041414	SRSF6	60	92.308	ENSXMAG00000021849	srsf6a	55	88.462	Xiphophorus_maculatus