EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSRBIG00000041615 (Gene tree)
Gene ID
-
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Rhinopithecus_bieti
Status
putative
Strand
Plus strand
Length
52549 bases
Position
chrMCGX01000985.1:1521328-1573876
Accession
108515992
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRBIP00000036075CPSF73-100_CPF11718.85.3e-4311
ENSRBIP00000036071CPSF73-100_CPF11718.85.7e-4311
ENSRBIP00000036066CPSF73-100_CPF11718.85.9e-4311
ENSRBIP00000036075Beta-CaspPF10996.86.5e-3411
ENSRBIP00000036071Beta-CaspPF10996.87e-3411
ENSRBIP00000036066Beta-CaspPF10996.87.2e-3411
ENSRBIP00000036075Lactamase_BPF00753.273.9e-1511
ENSRBIP00000036071Lactamase_BPF00753.278.3e-1511
ENSRBIP00000036066Lactamase_BPF00753.278.5e-1511
ENSRBIP00000036075RMMBLPF07521.121.7e-2111
ENSRBIP00000036071RMMBLPF07521.121.9e-2111
ENSRBIP00000036066RMMBLPF07521.121.9e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRBIT00000060074CPSF3-2021971-ENSRBIP00000036071656 (aa)-A0A2K6MJW7
ENSRBIT00000060068CPSF3-2011998-ENSRBIP00000036066665 (aa)-A0A2K6MJV7
ENSRBIT00000060078CPSF3-2031902XM_017853226ENSRBIP00000036075633 (aa)XP_017708715A0A2K6MJW4
Gene Model
Click here to download ENSRBIG00000041615's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000041615's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSRBIG00000041615CPSF36839.606ENSRBIG00000039487INTS117439.693
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRBIG00000041615CPSF39995.209ENSG00000119203CPSF310099.265Homo_sapiens
ENSRBIG00000041615CPSF39981.240ENSAPOG00000022087cpsf39880.412Acanthochromis_polyacanthus
ENSRBIG00000041615CPSF36898.140ENSAPOG00000012241CPSF38297.696Acanthochromis_polyacanthus
ENSRBIG00000041615CPSF39994.900ENSAMEG00000008493CPSF310093.567Ailuropoda_melanoleuca
ENSRBIG00000041615CPSF39783.016ENSACIG00000023663CPSF39983.016Amphilophus_citrinellus
ENSRBIG00000041615CPSF39678.981ENSACIG00000009846cpsf39978.981Amphilophus_citrinellus
ENSRBIG00000041615CPSF39981.240ENSAOCG00000022056cpsf39485.374Amphiprion_ocellaris
ENSRBIG00000041615CPSF39983.901ENSAOCG00000010077CPSF39882.941Amphiprion_ocellaris
ENSRBIG00000041615CPSF39983.901ENSAPEG00000021167CPSF39882.941Amphiprion_percula
ENSRBIG00000041615CPSF39981.240ENSAPEG00000019526cpsf39880.412Amphiprion_percula
ENSRBIG00000041615CPSF39981.240ENSATEG00000003959cpsf39979.618Anabas_testudineus
ENSRBIG00000041615CPSF39980.472ENSATEG00000014525CPSF39879.671Anabas_testudineus
ENSRBIG00000041615CPSF39991.190ENSAPLG00000006941CPSF39889.435Anas_platyrhynchos
ENSRBIG00000041615CPSF39788.661ENSACAG00000001759CPSF39988.661Anolis_carolinensis
ENSRBIG00000041615CPSF39988.872ENSANAG00000031254CPSF310087.281Aotus_nancymaae
ENSRBIG00000041615CPSF39782.857ENSACLG00000018846CPSF39982.857Astatotilapia_calliptera
ENSRBIG00000041615CPSF39981.240ENSACLG00000014484cpsf39980.150Astatotilapia_calliptera
ENSRBIG00000041615CPSF39984.211ENSAMXG00000004786cpsf39883.235Astyanax_mexicanus
ENSRBIG00000041615CPSF39995.054ENSBTAG00000019735CPSF310093.713Bos_taurus
ENSRBIG00000041615CPSF39156.556WBGene00013460cpsf-38956.604Caenorhabditis_elegans
ENSRBIG00000041615CPSF39994.900ENSCJAG00000006276CPSF310093.567Callithrix_jacchus
ENSRBIG00000041615CPSF39994.900ENSCAFG00000003375CPSF39593.567Canis_familiaris
ENSRBIG00000041615CPSF38994.845ENSCAFG00020026799CPSF310093.376Canis_lupus_dingo
ENSRBIG00000041615CPSF39995.054ENSCHIG00000013973CPSF310093.713Capra_hircus
ENSRBIG00000041615CPSF39995.209ENSTSYG00000002967CPSF310093.860Carlito_syrichta
ENSRBIG00000041615CPSF39993.199ENSCAPG00000013851CPSF310091.754Cavia_aperea
ENSRBIG00000041615CPSF39993.199ENSCPOG00000011299CPSF310091.959Cavia_porcellus
ENSRBIG00000041615CPSF39995.054ENSCCAG00000036730CPSF310093.713Cebus_capucinus
ENSRBIG00000041615CPSF39992.438ENSCATG00000014770CPSF39992.943Cercocebus_atys
ENSRBIG00000041615CPSF39992.736ENSCLAG00000002727CPSF310091.520Chinchilla_lanigera
ENSRBIG00000041615CPSF310086.111ENSCSAG00000007125CPSF310086.111Chlorocebus_sabaeus
ENSRBIG00000041615CPSF37787.000ENSCHOG00000000180CPSF37387.000Choloepus_hoffmanni
ENSRBIG00000041615CPSF39991.022ENSCPBG00000014074CPSF39989.589Chrysemys_picta_bellii
ENSRBIG00000041615CPSF39965.438ENSCING00000007214-9864.672Ciona_intestinalis
ENSRBIG00000041615CPSF310080.730ENSCANG00000034435CPSF310080.730Colobus_angolensis_palliatus
ENSRBIG00000041615CPSF39994.281ENSCGRG00001013134Cpsf310092.982Cricetulus_griseus_chok1gshd
ENSRBIG00000041615CPSF39994.281ENSCGRG00000018319Cpsf310092.982Cricetulus_griseus_crigri
ENSRBIG00000041615CPSF39982.769ENSCSEG00000002021CPSF39982.897Cynoglossus_semilaevis
ENSRBIG00000041615CPSF39984.211ENSCVAG00000015067CPSF39883.235Cyprinodon_variegatus
ENSRBIG00000041615CPSF39984.985ENSDARG00000027649cpsf39883.971Danio_rerio
ENSRBIG00000041615CPSF39993.210ENSDNOG00000008940CPSF39591.825Dasypus_novemcinctus
ENSRBIG00000041615CPSF39494.300ENSDORG00000014263Cpsf310092.934Dipodomys_ordii
ENSRBIG00000041615CPSF39964.651FBgn0261065Cpsf739864.065Drosophila_melanogaster
ENSRBIG00000041615CPSF39483.524ENSETEG00000003893CPSF310081.260Echinops_telfairi
ENSRBIG00000041615CPSF39975.188ENSEBUG00000009018cpsf39874.642Eptatretus_burgeri
ENSRBIG00000041615CPSF39994.900ENSEASG00005003970CPSF310093.567Equus_asinus_asinus
ENSRBIG00000041615CPSF39994.900ENSECAG00000019911CPSF310093.567Equus_caballus
ENSRBIG00000041615CPSF310078.216ENSEEUG00000015422CPSF310078.216Erinaceus_europaeus
ENSRBIG00000041615CPSF39984.186ENSELUG00000013775cpsf39883.088Esox_lucius
ENSRBIG00000041615CPSF39995.054ENSFCAG00000007852CPSF310095.054Felis_catus
ENSRBIG00000041615CPSF39990.881ENSFALG00000006572CPSF310090.881Ficedula_albicollis
ENSRBIG00000041615CPSF39992.558ENSFDAG00000006317CPSF39991.349Fukomys_damarensis
ENSRBIG00000041615CPSF36163.659ENSFHEG00000012186CPSF39963.659Fundulus_heteroclitus
ENSRBIG00000041615CPSF39980.930ENSFHEG00000014774cpsf39880.118Fundulus_heteroclitus
ENSRBIG00000041615CPSF39982.198ENSGMOG00000003157cpsf39881.324Gadus_morhua
ENSRBIG00000041615CPSF39990.417ENSGALG00000016424CPSF39990.394Gallus_gallus
ENSRBIG00000041615CPSF39778.459ENSGAFG00000019449cpsf39978.459Gambusia_affinis
ENSRBIG00000041615CPSF39984.031ENSGAFG00000008016CPSF39883.063Gambusia_affinis
ENSRBIG00000041615CPSF37187.366ENSGAGG00000025583CPSF39387.366Gopherus_agassizii
ENSRBIG00000041615CPSF39895.433ENSGGOG00000001757CPSF310095.433Gorilla_gorilla
ENSRBIG00000041615CPSF36176.049ENSHBUG00000014332CPSF39976.049Haplochromis_burtoni
ENSRBIG00000041615CPSF39981.240ENSHBUG00000001188cpsf39980.176Haplochromis_burtoni
ENSRBIG00000041615CPSF39992.117ENSHGLG00000000666CPSF39990.936Heterocephalus_glaber_female
ENSRBIG00000041615CPSF39992.117ENSHGLG00100007765CPSF39990.936Heterocephalus_glaber_male
ENSRBIG00000041615CPSF39980.805ENSHCOG00000007251cpsf39979.912Hippocampus_comes
ENSRBIG00000041615CPSF39982.508ENSHCOG00000015957CPSF39781.471Hippocampus_comes
ENSRBIG00000041615CPSF39983.127ENSIPUG00000023488cpsf39882.206Ictalurus_punctatus
ENSRBIG00000041615CPSF39994.281ENSSTOG00000004476CPSF310092.982Ictidomys_tridecemlineatus
ENSRBIG00000041615CPSF39993.199ENSJJAG00000023415Cpsf310091.813Jaculus_jaculus
ENSRBIG00000041615CPSF39983.591ENSKMAG00000007317CPSF39882.647Kryptolebias_marmoratus
ENSRBIG00000041615CPSF39981.085ENSKMAG00000002806cpsf39880.265Kryptolebias_marmoratus
ENSRBIG00000041615CPSF35674.263ENSLBEG00000015018-9974.263Labrus_bergylta
ENSRBIG00000041615CPSF39484.853ENSLBEG00000013492CPSF39883.796Labrus_bergylta
ENSRBIG00000041615CPSF39974.884ENSLBEG00000020569cpsf39474.374Labrus_bergylta
ENSRBIG00000041615CPSF39979.535ENSLACG00000008308CPSF39878.792Latimeria_chalumnae
ENSRBIG00000041615CPSF39984.923ENSLOCG00000016823cpsf39883.918Lepisosteus_oculatus
ENSRBIG00000041615CPSF39994.436ENSLAFG00000009467CPSF310091.765Loxodonta_africana
ENSRBIG00000041615CPSF39995.356ENSMFAG00000001339CPSF310095.062Macaca_fascicularis
ENSRBIG00000041615CPSF39995.356ENSMMUG00000018038CPSF310095.209Macaca_mulatta
ENSRBIG00000041615CPSF310083.187ENSMNEG00000039447CPSF310083.187Macaca_nemestrina
ENSRBIG00000041615CPSF39995.363ENSMLEG00000026825CPSF310094.006Mandrillus_leucophaeus
ENSRBIG00000041615CPSF39781.804ENSMAMG00000008835CPSF39981.804Mastacembelus_armatus
ENSRBIG00000041615CPSF39981.481ENSMAMG00000003076cpsf39880.645Mastacembelus_armatus
ENSRBIG00000041615CPSF39984.520ENSMZEG00005006258CPSF39982.857Maylandia_zebra
ENSRBIG00000041615CPSF39981.240ENSMZEG00005014358cpsf39980.176Maylandia_zebra
ENSRBIG00000041615CPSF39990.572ENSMGAG00000013995CPSF310089.205Meleagris_gallopavo
ENSRBIG00000041615CPSF35789.628ENSMAUG00000000166Cpsf310089.628Mesocricetus_auratus
ENSRBIG00000041615CPSF39989.026ENSMICG00000002363CPSF310088.906Microcebus_murinus
ENSRBIG00000041615CPSF39989.335ENSMOCG00000020067Cpsf310088.304Microtus_ochrogaster
ENSRBIG00000041615CPSF39979.070ENSMMOG00000018212CPSF39879.193Mola_mola
ENSRBIG00000041615CPSF37377.857ENSMMOG00000011923CPSF37977.857Mola_mola
ENSRBIG00000041615CPSF39991.284ENSMODG00000014703CPSF310090.159Monodelphis_domestica
ENSRBIG00000041615CPSF39780.000ENSMALG00000011474CPSF39980.000Monopterus_albus
ENSRBIG00000041615CPSF39981.944ENSMALG00000016416cpsf39980.848Monopterus_albus
ENSRBIG00000041615CPSF39993.972MGP_CAROLIEiJ_G0017640Cpsf310092.690Mus_caroli
ENSRBIG00000041615CPSF39993.972ENSMUSG00000054309Cpsf393100.000Mus_musculus
ENSRBIG00000041615CPSF39993.818MGP_PahariEiJ_G0029397Cpsf310092.544Mus_pahari
ENSRBIG00000041615CPSF39993.972MGP_SPRETEiJ_G0018481Cpsf310092.690Mus_spretus
ENSRBIG00000041615CPSF39994.127ENSMPUG00000013213CPSF310092.836Mustela_putorius_furo
ENSRBIG00000041615CPSF39993.827ENSMLUG00000010636CPSF310092.555Myotis_lucifugus
ENSRBIG00000041615CPSF39994.127ENSNGAG00000019836Cpsf310092.836Nannospalax_galili
ENSRBIG00000041615CPSF39782.857ENSNBRG00000010525CPSF39982.857Neolamprologus_brichardi
ENSRBIG00000041615CPSF39981.240ENSNBRG00000004770cpsf39980.176Neolamprologus_brichardi
ENSRBIG00000041615CPSF39995.209ENSNLEG00000013359CPSF310095.209Nomascus_leucogenys
ENSRBIG00000041615CPSF39075.676ENSMEUG00000013117-8875.676Notamacropus_eugenii
ENSRBIG00000041615CPSF310083.772ENSOPRG00000008902CPSF310083.772Ochotona_princeps
ENSRBIG00000041615CPSF39992.272ENSODEG00000003129CPSF310091.082Octodon_degus
ENSRBIG00000041615CPSF39981.550ENSONIG00000018812cpsf39980.470Oreochromis_niloticus
ENSRBIG00000041615CPSF38691.312ENSOANG00000008577CPSF310091.312Ornithorhynchus_anatinus
ENSRBIG00000041615CPSF39994.436ENSOCUG00000003728CPSF310093.129Oryctolagus_cuniculus
ENSRBIG00000041615CPSF39979.535ENSORLG00000018854cpsf39978.561Oryzias_latipes
ENSRBIG00000041615CPSF39979.535ENSORLG00020013331cpsf39978.561Oryzias_latipes_hni
ENSRBIG00000041615CPSF39979.535ENSORLG00015011017cpsf39978.561Oryzias_latipes_hsok
ENSRBIG00000041615CPSF39979.535ENSOMEG00000010647cpsf39478.561Oryzias_melastigma
ENSRBIG00000041615CPSF310083.772ENSOGAG00000001680CPSF310083.772Otolemur_garnettii
ENSRBIG00000041615CPSF39995.054ENSOARG00000015073CPSF310093.713Ovis_aries
ENSRBIG00000041615CPSF39995.363ENSPPAG00000042457CPSF310094.006Pan_paniscus
ENSRBIG00000041615CPSF39994.745ENSPPRG00000016790CPSF310094.745Panthera_pardus
ENSRBIG00000041615CPSF39994.745ENSPTIG00000003920CPSF310094.803Panthera_tigris_altaica
ENSRBIG00000041615CPSF39995.363ENSPTRG00000011638CPSF310094.006Pan_troglodytes
ENSRBIG00000041615CPSF39995.054ENSPANG00000016798CPSF310093.713Papio_anubis
ENSRBIG00000041615CPSF39985.891ENSPKIG00000023646cpsf39986.025Paramormyrops_kingsleyae
ENSRBIG00000041615CPSF39989.954ENSPSIG00000016144CPSF310087.848Pelodiscus_sinensis
ENSRBIG00000041615CPSF38781.326ENSPMGG00000006141-9981.326Periophthalmus_magnuspinnatus
ENSRBIG00000041615CPSF36173.827ENSPMGG00000015311CPSF39973.827Periophthalmus_magnuspinnatus
ENSRBIG00000041615CPSF39993.663ENSPEMG00000017668Cpsf310092.398Peromyscus_maniculatus_bairdii
ENSRBIG00000041615CPSF37685.629ENSPMAG00000004841cpsf39983.985Petromyzon_marinus
ENSRBIG00000041615CPSF39992.890ENSPCIG00000009823CPSF39990.774Phascolarctos_cinereus
ENSRBIG00000041615CPSF39983.566ENSPFOG00000010418-9882.769Poecilia_formosa
ENSRBIG00000041615CPSF39980.650ENSPFOG00000015922cpsf39979.619Poecilia_formosa
ENSRBIG00000041615CPSF36175.248ENSPLAG00000021300-9975.248Poecilia_latipinna
ENSRBIG00000041615CPSF39980.650ENSPLAG00000000882cpsf39979.619Poecilia_latipinna
ENSRBIG00000041615CPSF39980.650ENSPMEG00000018309cpsf39979.619Poecilia_mexicana
ENSRBIG00000041615CPSF39778.302ENSPREG00000014875cpsf39978.302Poecilia_reticulata
ENSRBIG00000041615CPSF39978.140ENSPREG00000004482CPSF39877.467Poecilia_reticulata
ENSRBIG00000041615CPSF39990.572ENSPPYG00000012666CPSF310089.474Pongo_abelii
ENSRBIG00000041615CPSF39465.090ENSPCAG00000015042CPSF310063.902Procavia_capensis
ENSRBIG00000041615CPSF38690.612ENSPCOG00000023016CPSF39887.943Propithecus_coquereli
ENSRBIG00000041615CPSF39994.884ENSPVAG00000005324CPSF39993.548Pteropus_vampyrus
ENSRBIG00000041615CPSF39981.240ENSPNYG00000004405cpsf39980.176Pundamilia_nyererei
ENSRBIG00000041615CPSF38387.477ENSPNYG00000021047CPSF39187.477Pundamilia_nyererei
ENSRBIG00000041615CPSF39983.591ENSPNAG00000023060cpsf39981.876Pygocentrus_nattereri
ENSRBIG00000041615CPSF39993.953ENSRNOG00000052418Cpsf39992.669Rattus_norvegicus
ENSRBIG00000041615CPSF39995.363ENSRROG00000033792CPSF310094.006Rhinopithecus_roxellana
ENSRBIG00000041615CPSF36852.667YLR277CYSH16051.907Saccharomyces_cerevisiae
ENSRBIG00000041615CPSF39995.820ENSSBOG00000027263CPSF310092.555Saimiri_boliviensis_boliviensis
ENSRBIG00000041615CPSF39993.045ENSSHAG00000007024CPSF310091.813Sarcophilus_harrisii
ENSRBIG00000041615CPSF39986.047ENSSFOG00015002108cpsf39985.940Scleropages_formosus
ENSRBIG00000041615CPSF39483.550ENSSMAG00000020534CPSF39582.280Scophthalmus_maximus
ENSRBIG00000041615CPSF39982.016ENSSDUG00000002828cpsf39680.910Seriola_dumerili
ENSRBIG00000041615CPSF39984.056ENSSDUG00000018498CPSF39982.540Seriola_dumerili
ENSRBIG00000041615CPSF39984.056ENSSLDG00000005234CPSF39982.540Seriola_lalandi_dorsalis
ENSRBIG00000041615CPSF39982.016ENSSLDG00000008469cpsf39680.910Seriola_lalandi_dorsalis
ENSRBIG00000041615CPSF310075.439ENSSARG00000005186CPSF310075.439Sorex_araneus
ENSRBIG00000041615CPSF39987.711ENSSPUG00000015525CPSF39885.947Sphenodon_punctatus
ENSRBIG00000041615CPSF39981.019ENSSPAG00000018579cpsf39880.352Stegastes_partitus
ENSRBIG00000041615CPSF39983.513ENSSPAG00000002906CPSF39981.991Stegastes_partitus
ENSRBIG00000041615CPSF39994.737ENSSSCG00000020799CPSF39993.450Sus_scrofa
ENSRBIG00000041615CPSF39990.726ENSTGUG00000013016CPSF39989.574Taeniopygia_guttata
ENSRBIG00000041615CPSF36169.720ENSTRUG00000013905CPSF39969.720Takifugu_rubripes
ENSRBIG00000041615CPSF39980.930ENSTRUG00000007030cpsf39780.000Takifugu_rubripes
ENSRBIG00000041615CPSF38192.683ENSTBEG00000002707CPSF37990.411Tupaia_belangeri
ENSRBIG00000041615CPSF39098.919ENSTTRG00000000861CPSF38898.919Tursiops_truncatus
ENSRBIG00000041615CPSF39991.628ENSUAMG00000007535CPSF39890.469Ursus_americanus
ENSRBIG00000041615CPSF39994.900ENSUMAG00000003676CPSF310094.900Ursus_maritimus
ENSRBIG00000041615CPSF39490.879ENSVPAG00000008041CPSF310089.432Vicugna_pacos
ENSRBIG00000041615CPSF39994.900ENSVVUG00000002194CPSF310093.567Vulpes_vulpes
ENSRBIG00000041615CPSF39985.891ENSXETG00000008263cpsf39885.022Xenopus_tropicalis
ENSRBIG00000041615CPSF35673.315ENSXCOG00000000957-8773.315Xiphophorus_couchianus
ENSRBIG00000041615CPSF39981.115ENSXCOG00000019695cpsf39979.912Xiphophorus_couchianus
ENSRBIG00000041615CPSF39980.805ENSXMAG00000009784cpsf39980.775Xiphophorus_maculatus
ENSRBIG00000041615CPSF39983.876ENSXMAG00000027291CPSF39882.916Xiphophorus_maculatus

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