EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000041669 (Gene tree)
Gene ID: -
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 19541 bases
Position: chrMCGX01017294.1:210166-229706
Accession: 108520230
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000036175	tRNA-synt_1g	PF09334.11	4.2e-10	1	1
ENSRBIP00000036185	Anticodon_1	PF08264.13	1.5e-32	1	1
ENSRBIP00000036175	Anticodon_1	PF08264.13	1.6e-32	1	1
ENSRBIP00000036193	Anticodon_1	PF08264.13	3.4e-28	1	1
ENSRBIP00000036175	tRNA-synt_1	PF00133.22	3e-200	1	1
ENSRBIP00000036185	tRNA-synt_1	PF00133.22	1.1e-176	1	1
ENSRBIP00000036193	tRNA-synt_1	PF00133.22	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000060179	VARS-201	4314	XM_017859492	ENSRBIP00000036175	1264 (aa)	XP_017714981	A0A2K6MK61
ENSRBIT00000060189	VARS-202	3711	-	ENSRBIP00000036185	1236 (aa)	-	A0A2K6MK72
ENSRBIT00000060196	VARS-203	1191	-	ENSRBIP00000036193	396 (aa)	-	A0A2K6MK71

Gene Model

Click here to download ENSRBIG00000041669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000041669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000041669	VARS	100	41.119	ENSRBIG00000032725	VARS2	91	51.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000041669	VARS	100	98.972	ENSG00000204394	VARS	100	98.972	Homo_sapiens
ENSRBIG00000041669	VARS	98	64.796	ENSAPOG00000020921	vars	99	64.475	Acanthochromis_polyacanthus
ENSRBIG00000041669	VARS	98	64.796	ENSAPOG00000020691	vars	99	64.475	Acanthochromis_polyacanthus
ENSRBIG00000041669	VARS	100	95.257	ENSAMEG00000006417	VARS	100	95.257	Ailuropoda_melanoleuca
ENSRBIG00000041669	VARS	100	65.725	ENSACIG00000013752	vars	100	65.412	Amphilophus_citrinellus
ENSRBIG00000041669	VARS	100	64.701	ENSAOCG00000002447	vars	100	64.280	Amphiprion_ocellaris
ENSRBIG00000041669	VARS	100	64.701	ENSAPEG00000010638	vars	99	64.875	Amphiprion_percula
ENSRBIG00000041669	VARS	100	64.724	ENSATEG00000020219	vars	100	64.331	Anabas_testudineus
ENSRBIG00000041669	VARS	89	61.096	ENSACAG00000017289	-	100	62.778	Anolis_carolinensis
ENSRBIG00000041669	VARS	90	70.512	ENSACAG00000029133	-	99	70.945	Anolis_carolinensis
ENSRBIG00000041669	VARS	100	97.547	ENSANAG00000015453	VARS	100	97.547	Aotus_nancymaae
ENSRBIG00000041669	VARS	100	65.039	ENSACLG00000025699	vars	97	64.729	Astatotilapia_calliptera
ENSRBIG00000041669	VARS	94	66.138	ENSAMXG00000017716	vars	95	66.138	Astyanax_mexicanus
ENSRBIG00000041669	VARS	100	94.937	ENSBTAG00000005631	VARS	100	94.937	Bos_taurus
ENSRBIG00000041669	VARS	100	97.627	ENSCJAG00000002604	VARS	100	97.627	Callithrix_jacchus
ENSRBIG00000041669	VARS	100	94.620	ENSCAFG00000000636	VARS	100	94.620	Canis_familiaris
ENSRBIG00000041669	VARS	94	94.510	ENSCAFG00020020790	VARS	96	94.510	Canis_lupus_dingo
ENSRBIG00000041669	VARS	100	95.174	ENSCHIG00000011008	VARS	100	95.174	Capra_hircus
ENSRBIG00000041669	VARS	100	96.044	ENSTSYG00000001567	VARS	100	96.044	Carlito_syrichta
ENSRBIG00000041669	VARS	100	88.943	ENSCAPG00000013736	VARS	99	90.657	Cavia_aperea
ENSRBIG00000041669	VARS	100	91.772	ENSCPOG00000000870	VARS	100	91.772	Cavia_porcellus
ENSRBIG00000041669	VARS	100	97.785	ENSCCAG00000035656	VARS	100	97.785	Cebus_capucinus
ENSRBIG00000041669	VARS	100	99.495	ENSCATG00000022394	VARS	100	99.495	Cercocebus_atys
ENSRBIG00000041669	VARS	95	83.092	ENSCLAG00000009470	VARS	92	89.851	Chinchilla_lanigera
ENSRBIG00000041669	VARS	100	99.763	ENSCSAG00000008784	VARS	100	99.763	Chlorocebus_sabaeus
ENSRBIG00000041669	VARS	100	60.688	ENSCPBG00000007943	VARS	96	74.435	Chrysemys_picta_bellii
ENSRBIG00000041669	VARS	100	99.446	ENSCANG00000033570	VARS	100	99.446	Colobus_angolensis_palliatus
ENSRBIG00000041669	VARS	100	93.117	ENSCGRG00001005686	Vars	100	93.117	Cricetulus_griseus_chok1gshd
ENSRBIG00000041669	VARS	100	90.663	ENSCGRG00000013352	Vars	78	88.023	Cricetulus_griseus_crigri
ENSRBIG00000041669	VARS	100	64.427	ENSCSEG00000019652	vars	100	64.506	Cynoglossus_semilaevis
ENSRBIG00000041669	VARS	100	65.190	ENSCVAG00000022398	vars	100	65.039	Cyprinodon_variegatus
ENSRBIG00000041669	VARS	100	65.116	ENSDARG00000044575	vars	100	65.268	Danio_rerio
ENSRBIG00000041669	VARS	72	87.584	ENSDNOG00000038678	-	100	92.150	Dasypus_novemcinctus
ENSRBIG00000041669	VARS	100	91.155	ENSDORG00000016433	Vars	95	93.227	Dipodomys_ordii
ENSRBIG00000041669	VARS	67	92.035	ENSETEG00000003824	VARS	76	86.618	Echinops_telfairi
ENSRBIG00000041669	VARS	100	52.311	ENSEBUG00000004637	vars	100	62.225	Eptatretus_burgeri
ENSRBIG00000041669	VARS	75	64.706	ENSEBUG00000007086	vars	84	69.808	Eptatretus_burgeri
ENSRBIG00000041669	VARS	100	95.807	ENSEASG00005015673	VARS	100	95.807	Equus_asinus_asinus
ENSRBIG00000041669	VARS	100	94.783	ENSECAG00000014620	VARS	100	95.257	Equus_caballus
ENSRBIG00000041669	VARS	83	93.080	ENSEEUG00000004116	VARS	83	93.080	Erinaceus_europaeus
ENSRBIG00000041669	VARS	100	64.379	ENSELUG00000006550	vars	97	64.181	Esox_lucius
ENSRBIG00000041669	VARS	100	94.858	ENSFCAG00000004510	VARS	100	94.858	Felis_catus
ENSRBIG00000041669	VARS	82	91.959	ENSFDAG00000011401	VARS	100	91.959	Fukomys_damarensis
ENSRBIG00000041669	VARS	100	65.268	ENSFHEG00000010672	vars	100	65.116	Fundulus_heteroclitus
ENSRBIG00000041669	VARS	100	59.322	ENSGMOG00000014908	vars	97	66.223	Gadus_morhua
ENSRBIG00000041669	VARS	100	65.525	ENSGAFG00000021630	vars	100	65.501	Gambusia_affinis
ENSRBIG00000041669	VARS	92	66.416	ENSGACG00000009601	vars	98	66.250	Gasterosteus_aculeatus
ENSRBIG00000041669	VARS	50	64.984	ENSGAGG00000006508	-	91	64.353	Gopherus_agassizii
ENSRBIG00000041669	VARS	100	56.061	ENSGAGG00000006067	-	96	77.576	Gopherus_agassizii
ENSRBIG00000041669	VARS	100	99.051	ENSGGOG00000011364	VARS	100	99.051	Gorilla_gorilla
ENSRBIG00000041669	VARS	100	64.961	ENSHBUG00000017151	vars	97	64.651	Haplochromis_burtoni
ENSRBIG00000041669	VARS	100	90.823	ENSHGLG00000011646	VARS	100	90.506	Heterocephalus_glaber_female
ENSRBIG00000041669	VARS	100	82.176	ENSHGLG00100018062	VARS	100	83.223	Heterocephalus_glaber_male
ENSRBIG00000041669	VARS	99	64.496	ENSHCOG00000012198	vars	99	64.669	Hippocampus_comes
ENSRBIG00000041669	VARS	100	65.370	ENSIPUG00000005218	vars	100	65.370	Ictalurus_punctatus
ENSRBIG00000041669	VARS	100	94.545	ENSSTOG00000013112	VARS	100	94.545	Ictidomys_tridecemlineatus
ENSRBIG00000041669	VARS	100	91.456	ENSJJAG00000019749	-	100	91.456	Jaculus_jaculus
ENSRBIG00000041669	VARS	100	74.693	ENSJJAG00000015343	-	100	72.627	Jaculus_jaculus
ENSRBIG00000041669	VARS	100	65.087	ENSKMAG00000009455	vars	100	64.929	Kryptolebias_marmoratus
ENSRBIG00000041669	VARS	100	64.664	ENSLBEG00000010341	vars	100	64.506	Labrus_bergylta
ENSRBIG00000041669	VARS	94	62.366	ENSLACG00000015232	VARS	99	62.787	Latimeria_chalumnae
ENSRBIG00000041669	VARS	100	66.953	ENSLOCG00000004240	vars	100	67.188	Lepisosteus_oculatus
ENSRBIG00000041669	VARS	100	93.750	ENSLAFG00000023090	VARS	100	94.225	Loxodonta_africana
ENSRBIG00000041669	VARS	100	99.684	ENSMFAG00000001032	VARS	100	99.684	Macaca_fascicularis
ENSRBIG00000041669	VARS	100	99.684	ENSMMUG00000006828	VARS	100	99.684	Macaca_mulatta
ENSRBIG00000041669	VARS	100	99.684	ENSMNEG00000042072	VARS	100	99.684	Macaca_nemestrina
ENSRBIG00000041669	VARS	100	99.446	ENSMLEG00000039307	VARS	100	99.446	Mandrillus_leucophaeus
ENSRBIG00000041669	VARS	100	64.569	ENSMAMG00000003949	vars	100	64.977	Mastacembelus_armatus
ENSRBIG00000041669	VARS	100	65.039	ENSMZEG00005018327	vars	100	64.483	Maylandia_zebra
ENSRBIG00000041669	VARS	100	92.722	ENSMAUG00000006715	Vars	100	92.722	Mesocricetus_auratus
ENSRBIG00000041669	VARS	100	95.016	ENSMICG00000003548	VARS	100	95.771	Microcebus_murinus
ENSRBIG00000041669	VARS	100	91.155	ENSMOCG00000015404	Vars	100	90.506	Microtus_ochrogaster
ENSRBIG00000041669	VARS	100	64.286	ENSMMOG00000015801	vars	100	64.286	Mola_mola
ENSRBIG00000041669	VARS	84	59.078	ENSMODG00000001325	-	98	62.281	Monodelphis_domestica
ENSRBIG00000041669	VARS	100	86.788	ENSMODG00000015204	-	100	86.788	Monodelphis_domestica
ENSRBIG00000041669	VARS	99	64.775	ENSMALG00000022532	vars	99	64.308	Monopterus_albus
ENSRBIG00000041669	VARS	100	93.275	MGP_CAROLIEiJ_G0021491	Vars	100	93.671	Mus_caroli
ENSRBIG00000041669	VARS	100	93.275	ENSMUSG00000007029	Vars	100	93.671	Mus_musculus
ENSRBIG00000041669	VARS	100	92.642	MGP_PahariEiJ_G0020486	Vars	100	93.038	Mus_pahari
ENSRBIG00000041669	VARS	100	93.354	MGP_SPRETEiJ_G0022396	Vars	100	93.750	Mus_spretus
ENSRBIG00000041669	VARS	100	95.095	ENSMPUG00000010821	VARS	100	95.095	Mustela_putorius_furo
ENSRBIG00000041669	VARS	78	93.725	ENSMLUG00000013126	VARS	100	93.725	Myotis_lucifugus
ENSRBIG00000041669	VARS	100	92.247	ENSNGAG00000012151	Vars	100	92.247	Nannospalax_galili
ENSRBIG00000041669	VARS	100	64.729	ENSNBRG00000020520	vars	100	64.419	Neolamprologus_brichardi
ENSRBIG00000041669	VARS	100	98.180	ENSNLEG00000006351	VARS	100	98.180	Nomascus_leucogenys
ENSRBIG00000041669	VARS	100	83.149	ENSMEUG00000011378	VARS	100	83.149	Notamacropus_eugenii
ENSRBIG00000041669	VARS	100	93.987	ENSOPRG00000003607	VARS	100	93.987	Ochotona_princeps
ENSRBIG00000041669	VARS	100	91.456	ENSODEG00000017681	VARS	100	91.456	Octodon_degus
ENSRBIG00000041669	VARS	100	65.442	ENSONIG00000013064	vars	99	67.910	Oreochromis_niloticus
ENSRBIG00000041669	VARS	77	78.741	ENSOANG00000005400	VARS	98	78.266	Ornithorhynchus_anatinus
ENSRBIG00000041669	VARS	100	92.192	ENSOCUG00000022463	VARS	100	92.192	Oryctolagus_cuniculus
ENSRBIG00000041669	VARS	100	64.373	ENSORLG00000013063	vars	100	64.521	Oryzias_latipes
ENSRBIG00000041669	VARS	100	65.073	ENSORLG00020003504	vars	100	65.050	Oryzias_latipes_hni
ENSRBIG00000041669	VARS	100	64.969	ENSORLG00015009001	vars	100	64.946	Oryzias_latipes_hsok
ENSRBIG00000041669	VARS	100	64.815	ENSOMEG00000015016	vars	100	64.792	Oryzias_melastigma
ENSRBIG00000041669	VARS	100	95.174	ENSOGAG00000007515	VARS	100	95.174	Otolemur_garnettii
ENSRBIG00000041669	VARS	100	99.209	ENSPPAG00000034012	VARS	100	99.209	Pan_paniscus
ENSRBIG00000041669	VARS	100	95.016	ENSPPRG00000014855	VARS	100	95.016	Panthera_pardus
ENSRBIG00000041669	VARS	85	94.981	ENSPTIG00000010462	VARS	95	94.963	Panthera_tigris_altaica
ENSRBIG00000041669	VARS	100	99.130	ENSPTRG00000017985	VARS	100	99.130	Pan_troglodytes
ENSRBIG00000041669	VARS	100	97.871	ENSPANG00000014565	VARS	100	97.871	Papio_anubis
ENSRBIG00000041669	VARS	100	64.015	ENSPKIG00000016304	vars	100	64.170	Paramormyrops_kingsleyae
ENSRBIG00000041669	VARS	100	65.485	ENSPMGG00000023909	vars	100	65.563	Periophthalmus_magnuspinnatus
ENSRBIG00000041669	VARS	100	93.829	ENSPEMG00000006639	Vars	100	93.829	Peromyscus_maniculatus_bairdii
ENSRBIG00000041669	VARS	100	86.313	ENSPCIG00000018553	VARS	100	86.313	Phascolarctos_cinereus
ENSRBIG00000041669	VARS	100	65.759	ENSPFOG00000015690	vars	100	65.734	Poecilia_formosa
ENSRBIG00000041669	VARS	100	66.090	ENSPLAG00000009590	vars	100	66.090	Poecilia_latipinna
ENSRBIG00000041669	VARS	100	65.759	ENSPMEG00000004708	vars	100	65.734	Poecilia_mexicana
ENSRBIG00000041669	VARS	100	64.044	ENSPREG00000013264	vars	100	63.636	Poecilia_reticulata
ENSRBIG00000041669	VARS	100	97.310	ENSPPYG00000016460	VARS	100	97.310	Pongo_abelii
ENSRBIG00000041669	VARS	100	89.189	ENSPCAG00000013565	VARS	86	92.639	Procavia_capensis
ENSRBIG00000041669	VARS	100	95.257	ENSPCOG00000010942	VARS	100	95.731	Propithecus_coquereli
ENSRBIG00000041669	VARS	100	91.456	ENSPVAG00000012403	VARS	100	91.456	Pteropus_vampyrus
ENSRBIG00000041669	VARS	100	64.961	ENSPNYG00000022511	vars	100	64.651	Pundamilia_nyererei
ENSRBIG00000041669	VARS	100	64.701	ENSPNAG00000020962	vars	100	64.546	Pygocentrus_nattereri
ENSRBIG00000041669	VARS	100	93.434	ENSRNOG00000000867	Vars	100	93.434	Rattus_norvegicus
ENSRBIG00000041669	VARS	100	100.000	ENSRROG00000045490	VARS	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000041669	VARS	100	97.310	ENSSBOG00000035402	VARS	100	97.310	Saimiri_boliviensis_boliviensis
ENSRBIG00000041669	VARS	100	81.697	ENSSHAG00000006937	VARS	100	81.932	Sarcophilus_harrisii
ENSRBIG00000041669	VARS	100	64.788	ENSSFOG00015014272	vars	100	64.865	Scleropages_formosus
ENSRBIG00000041669	VARS	100	63.700	ENSSMAG00000009596	vars	99	63.439	Scophthalmus_maximus
ENSRBIG00000041669	VARS	100	64.628	ENSSDUG00000014177	vars	100	64.319	Seriola_dumerili
ENSRBIG00000041669	VARS	100	64.551	ENSSLDG00000025316	vars	100	64.241	Seriola_lalandi_dorsalis
ENSRBIG00000041669	VARS	100	65.008	ENSSPAG00000017068	vars	100	65.187	Stegastes_partitus
ENSRBIG00000041669	VARS	100	93.202	ENSSSCG00000038950	VARS	100	93.676	Sus_scrofa
ENSRBIG00000041669	VARS	84	52.819	ENSTRUG00000002238	-	99	53.116	Takifugu_rubripes
ENSRBIG00000041669	VARS	82	64.334	ENSTRUG00000012307	vars	98	64.279	Takifugu_rubripes
ENSRBIG00000041669	VARS	100	65.442	ENSTNIG00000008011	vars	100	65.439	Tetraodon_nigroviridis
ENSRBIG00000041669	VARS	54	95.506	ENSTBEG00000004728	-	60	95.506	Tupaia_belangeri
ENSRBIG00000041669	VARS	100	91.400	ENSTTRG00000014128	VARS	100	86.234	Tursiops_truncatus
ENSRBIG00000041669	VARS	100	91.431	ENSUAMG00000010424	VARS	100	91.431	Ursus_americanus
ENSRBIG00000041669	VARS	93	94.921	ENSUMAG00000013486	VARS	98	95.079	Ursus_maritimus
ENSRBIG00000041669	VARS	100	94.229	ENSVVUG00000021323	VARS	100	94.308	Vulpes_vulpes
ENSRBIG00000041669	VARS	96	63.056	ENSXETG00000024076	vars	98	62.864	Xenopus_tropicalis
ENSRBIG00000041669	VARS	100	65.669	ENSXCOG00000019172	vars	100	65.645	Xiphophorus_couchianus
ENSRBIG00000041669	VARS	100	65.447	ENSXMAG00000010927	vars	100	65.423	Xiphophorus_maculatus