EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000042297 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 1120 bases
Position: chrMCGX01064494.1:450-1569
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000037428	APOBEC_N	PF08210.11	4.6e-96	1	2
ENSRBIP00000037428	APOBEC_N	PF08210.11	4.6e-96	2	2
ENSRBIP00000037423	APOBEC_N	PF08210.11	1.2e-95	1	2
ENSRBIP00000037423	APOBEC_N	PF08210.11	1.2e-95	2	2
ENSRBIP00000037430	APOBEC_N	PF08210.11	3.3e-49	1	1
ENSRBIP00000037428	APOBEC_C	PF05240.14	1.5e-61	1	2
ENSRBIP00000037428	APOBEC_C	PF05240.14	1.5e-61	2	2
ENSRBIP00000037423	APOBEC_C	PF05240.14	1.6e-61	1	2
ENSRBIP00000037423	APOBEC_C	PF05240.14	1.6e-61	2	2
ENSRBIP00000037430	APOBEC_C	PF05240.14	6.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000061443	-	477	-	ENSRBIP00000037430	158 (aa)	-	A0A2K6MNR2
ENSRBIT00000061436	-	1062	-	ENSRBIP00000037423	353 (aa)	-	A0A2K6MNQ3
ENSRBIT00000061441	-	1050	-	ENSRBIP00000037428	349 (aa)	-	A0A2K6MNQ5

Gene Model

Click here to download ENSRBIG00000042297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000042297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000042297	-	100	54.090	ENSRBIG00000042829	-	99	54.090
ENSRBIG00000042297	-	55	41.250	ENSRBIG00000031161	APOBEC1	50	41.250
ENSRBIG00000042297	-	99	33.125	ENSRBIG00000044756	APOBEC2	81	33.520
ENSRBIG00000042297	-	92	38.037	ENSRBIG00000029088	APOBEC3H	96	38.037
ENSRBIG00000042297	-	100	93.631	ENSRBIG00000030323	-	100	88.122
ENSRBIG00000042297	-	99	40.127	ENSRBIG00000026659	AICDA	96	39.597
ENSRBIG00000042297	-	100	78.889	ENSRBIG00000030834	-	100	78.889
ENSRBIG00000042297	-	99	45.385	ENSRBIG00000035436	APOBEC3G	98	37.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000042297	-	100	77.778	ENSG00000243811	APOBEC3D	100	77.778	Homo_sapiens
ENSRBIG00000042297	-	99	77.707	ENSG00000244509	APOBEC3C	100	75.556	Homo_sapiens
ENSRBIG00000042297	-	100	87.898	ENSG00000128394	APOBEC3F	100	82.842	Homo_sapiens
ENSRBIG00000042297	-	99	68.889	ENSANAG00000030088	-	94	68.889	Aotus_nancymaae
ENSRBIG00000042297	-	84	66.667	ENSCJAG00000015317	-	100	66.667	Callithrix_jacchus
ENSRBIG00000042297	-	99	47.170	ENSCAFG00020002615	-	98	47.486	Canis_lupus_dingo
ENSRBIG00000042297	-	99	57.595	ENSTSYG00000034260	-	98	49.725	Carlito_syrichta
ENSRBIG00000042297	-	99	56.688	ENSTSYG00000028254	-	98	56.897	Carlito_syrichta
ENSRBIG00000042297	-	99	53.846	ENSTSYG00000030036	-	98	52.247	Carlito_syrichta
ENSRBIG00000042297	-	99	69.444	ENSCCAG00000030932	-	86	69.444	Cebus_capucinus
ENSRBIG00000042297	-	99	75.796	ENSCATG00000043226	APOBEC3C	100	73.333	Cercocebus_atys
ENSRBIG00000042297	-	99	93.631	ENSCATG00000033502	-	95	93.333	Cercocebus_atys
ENSRBIG00000042297	-	100	71.667	ENSCSAG00000006402	APOBEC3C	100	71.667	Chlorocebus_sabaeus
ENSRBIG00000042297	-	99	92.994	ENSCSAG00000006382	APOBEC3F	100	80.000	Chlorocebus_sabaeus
ENSRBIG00000042297	-	99	75.159	ENSCANG00000039177	APOBEC3C	100	73.333	Colobus_angolensis_palliatus
ENSRBIG00000042297	-	99	82.803	ENSCANG00000031957	-	99	78.049	Colobus_angolensis_palliatus
ENSRBIG00000042297	-	100	96.815	ENSCANG00000032904	-	100	88.472	Colobus_angolensis_palliatus
ENSRBIG00000042297	-	100	91.720	ENSCANG00000033269	-	99	92.778	Colobus_angolensis_palliatus
ENSRBIG00000042297	-	98	44.231	ENSDNOG00000044642	-	99	37.241	Dasypus_novemcinctus
ENSRBIG00000042297	-	99	46.429	ENSEASG00005018641	-	96	45.500	Equus_asinus_asinus
ENSRBIG00000042297	-	99	50.318	ENSECAG00000006071	-	99	46.667	Equus_caballus
ENSRBIG00000042297	-	99	76.433	ENSGGOG00000036587	-	100	74.444	Gorilla_gorilla
ENSRBIG00000042297	-	100	87.261	ENSGGOG00000038678	APOBEC3F	100	83.110	Gorilla_gorilla
ENSRBIG00000042297	-	99	43.429	ENSHGLG00000017315	-	83	43.429	Heterocephalus_glaber_female
ENSRBIG00000042297	-	99	43.429	ENSHGLG00100003105	-	93	43.429	Heterocephalus_glaber_male
ENSRBIG00000042297	-	100	91.083	ENSMFAG00000004037	APOBEC3F	100	85.523	Macaca_fascicularis
ENSRBIG00000042297	-	99	76.433	ENSMFAG00000016792	APOBEC3C	100	73.889	Macaca_fascicularis
ENSRBIG00000042297	-	99	78.344	ENSMFAG00000002331	-	100	72.460	Macaca_fascicularis
ENSRBIG00000042297	-	100	91.720	ENSMMUG00000004017	APOBEC3F	95	91.111	Macaca_mulatta
ENSRBIG00000042297	-	99	77.070	ENSMMUG00000004018	APOBEC3C	95	74.444	Macaca_mulatta
ENSRBIG00000042297	-	100	91.111	ENSMNEG00000043316	APOBEC3D	100	79.832	Macaca_nemestrina
ENSRBIG00000042297	-	99	74.522	ENSMNEG00000045196	APOBEC3C	100	72.222	Macaca_nemestrina
ENSRBIG00000042297	-	99	75.796	ENSMLEG00000036992	APOBEC3C	100	73.333	Mandrillus_leucophaeus
ENSRBIG00000042297	-	100	94.268	ENSMLEG00000029642	APOBEC3F	100	87.936	Mandrillus_leucophaeus
ENSRBIG00000042297	-	99	55.769	ENSMICG00000042615	-	92	52.577	Microcebus_murinus
ENSRBIG00000042297	-	98	49.068	ENSMLUG00000023676	-	99	42.675	Myotis_lucifugus
ENSRBIG00000042297	-	99	67.516	ENSNLEG00000035811	-	100	63.990	Nomascus_leucogenys
ENSRBIG00000042297	-	99	74.522	ENSNLEG00000028392	APOBEC3C	100	72.222	Nomascus_leucogenys
ENSRBIG00000042297	-	99	53.503	ENSOGAG00000032498	-	100	41.344	Otolemur_garnettii
ENSRBIG00000042297	-	99	46.835	ENSOGAG00000033404	-	100	41.758	Otolemur_garnettii
ENSRBIG00000042297	-	99	45.513	ENSOGAG00000030300	-	99	40.921	Otolemur_garnettii
ENSRBIG00000042297	-	99	77.707	ENSPPAG00000014118	APOBEC3C	100	75.556	Pan_paniscus
ENSRBIG00000042297	-	100	76.111	ENSPPAG00000028218	-	100	76.111	Pan_paniscus
ENSRBIG00000042297	-	98	47.340	ENSPPRG00000003726	-	97	47.340	Panthera_pardus
ENSRBIG00000042297	-	100	88.333	ENSPTRG00000014385	APOBEC3C	100	88.333	Pan_troglodytes
ENSRBIG00000042297	-	100	75.556	ENSPTRG00000041588	APOBEC3D	100	75.556	Pan_troglodytes
ENSRBIG00000042297	-	100	94.872	ENSPANG00000010775	APOBEC3F	100	87.131	Papio_anubis
ENSRBIG00000042297	-	99	72.611	ENSPPYG00000011832	APOBEC3C	100	71.111	Pongo_abelii
ENSRBIG00000042297	-	82	58.140	ENSPCOG00000022067	-	98	58.140	Propithecus_coquereli
ENSRBIG00000042297	-	79	59.524	ENSPCOG00000018072	-	95	60.000	Propithecus_coquereli
ENSRBIG00000042297	-	83	50.407	ENSPVAG00000009461	-	72	50.407	Pteropus_vampyrus
ENSRBIG00000042297	-	100	99.150	ENSRROG00000029996	-	100	99.150	Rhinopithecus_roxellana
ENSRBIG00000042297	-	100	79.444	ENSRROG00000028557	-	100	79.444	Rhinopithecus_roxellana
ENSRBIG00000042297	-	100	91.720	ENSRROG00000029045	APOBEC3C	100	87.936	Rhinopithecus_roxellana
ENSRBIG00000042297	-	99	69.444	ENSSBOG00000032780	-	100	69.444	Saimiri_boliviensis_boliviensis
ENSRBIG00000042297	-	93	46.369	ENSUAMG00000004433	-	98	46.629	Ursus_americanus
ENSRBIG00000042297	-	99	47.771	ENSUMAG00000014441	-	89	45.026	Ursus_maritimus
ENSRBIG00000042297	-	84	51.493	ENSVVUG00000014628	-	97	51.493	Vulpes_vulpes