EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000042413 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 6950 bases
Position: chrMCGX01016019.1:1468325-1475274
Accession: 108518910
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000037706	RNA_pol_L_2	PF13656.6	4.5e-29	1	1
ENSRBIP00000037702	RNA_pol_L_2	PF13656.6	9.3e-29	1	1
ENSRBIP00000037711	RNA_pol_L_2	PF13656.6	1.1e-28	1	1
ENSRBIP00000037708	RNA_pol_L_2	PF13656.6	3.4e-18	1	1
ENSRBIP00000037706	RNA_pol_L	PF01193.24	5e-10	1	1
ENSRBIP00000037702	RNA_pol_L	PF01193.24	6.7e-10	1	1
ENSRBIP00000037711	RNA_pol_L	PF01193.24	1.1e-09	1	1
ENSRBIP00000037708	RNA_pol_L	PF01193.24	0.00031	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000061722	-	264	-	ENSRBIP00000037708	87 (aa)	-	A0A2K6MPI9
ENSRBIT00000061720	-	707	XM_017857619	ENSRBIP00000037706	117 (aa)	XP_017713108	A0A2K6MPN7
ENSRBIT00000061716	-	387	-	ENSRBIP00000037702	128 (aa)	-	A0A2K6MPP1
ENSRBIT00000061725	-	1129	XM_017857618	ENSRBIP00000037711	159 (aa)	XP_017713107	A0A2K6MPP2

Gene Model

Click here to download ENSRBIG00000042413's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000042413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000042413	-	85	33.981	ENSRBIG00000000336	-	77	33.981
ENSRBIG00000042413	-	85	33.981	ENSRBIG00000036378	-	77	33.981

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000042413	-	100	100.000	ENSANAG00000020385	-	100	100.000	Aotus_nancymaae
ENSRBIG00000042413	-	100	100.000	ENSBTAG00000005446	POLR2J	100	100.000	Bos_taurus
ENSRBIG00000042413	-	100	100.000	ENSCAFG00020013154	-	100	100.000	Canis_lupus_dingo
ENSRBIG00000042413	-	100	100.000	ENSCHIG00000009008	-	100	100.000	Capra_hircus
ENSRBIG00000042413	-	96	91.964	ENSCAPG00000013625	-	96	91.964	Cavia_aperea
ENSRBIG00000042413	-	100	100.000	ENSCCAG00000029378	-	100	100.000	Cebus_capucinus
ENSRBIG00000042413	-	68	100.000	ENSCHOG00000008325	-	100	78.378	Choloepus_hoffmanni
ENSRBIG00000042413	-	85	99.000	ENSCPBG00000027774	-	84	99.000	Chrysemys_picta_bellii
ENSRBIG00000042413	-	100	100.000	ENSECAG00000022750	-	100	100.000	Equus_caballus
ENSRBIG00000042413	-	94	76.829	ENSGGOG00000043186	-	100	67.296	Gorilla_gorilla
ENSRBIG00000042413	-	79	85.915	ENSGGOG00000003934	-	90	90.991	Gorilla_gorilla
ENSRBIG00000042413	-	89	92.958	ENSGGOG00000038950	-	82	92.958	Gorilla_gorilla
ENSRBIG00000042413	-	69	95.000	ENSLACG00000022567	-	60	92.063	Latimeria_chalumnae
ENSRBIG00000042413	-	100	100.000	ENSMFAG00000039168	-	100	100.000	Macaca_fascicularis
ENSRBIG00000042413	-	100	100.000	ENSMLEG00000033262	-	100	100.000	Mandrillus_leucophaeus
ENSRBIG00000042413	-	100	100.000	ENSMICG00000010323	-	100	100.000	Microcebus_murinus
ENSRBIG00000042413	-	97	76.190	ENSPTRG00000028611	-	98	80.303	Pan_troglodytes
ENSRBIG00000042413	-	100	100.000	ENSPTRG00000019132	-	100	100.000	Pan_troglodytes
ENSRBIG00000042413	-	89	77.465	ENSPTRG00000052689	-	95	77.465	Pan_troglodytes
ENSRBIG00000042413	-	100	78.616	ENSPTRG00000050290	-	100	78.616	Pan_troglodytes
ENSRBIG00000042413	-	100	100.000	ENSPANG00000015179	-	100	100.000	Papio_anubis
ENSRBIG00000042413	-	100	96.581	ENSPKIG00000013014	-	100	96.581	Paramormyrops_kingsleyae
ENSRBIG00000042413	-	92	99.074	ENSPCAG00000003269	-	88	79.245	Procavia_capensis
ENSRBIG00000042413	-	100	100.000	ENSRROG00000035578	-	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000042413	-	76	100.000	ENSTTRG00000014846	-	100	83.688	Tursiops_truncatus
ENSRBIG00000042413	-	91	73.832	ENSVPAG00000007077	-	89	62.500	Vicugna_pacos
ENSRBIG00000042413	-	100	100.000	ENSVVUG00000023727	-	100	100.000	Vulpes_vulpes