EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000042521 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 145629 bases
Position: chrMCGX01015600.1:228623-374251
Accession: 108518574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000038070	PUF	PF00806.19	3.5e-71	1	8
ENSRBIP00000038070	PUF	PF00806.19	3.5e-71	2	8
ENSRBIP00000038070	PUF	PF00806.19	3.5e-71	3	8
ENSRBIP00000038070	PUF	PF00806.19	3.5e-71	4	8
ENSRBIP00000038070	PUF	PF00806.19	3.5e-71	5	8
ENSRBIP00000038070	PUF	PF00806.19	3.5e-71	6	8
ENSRBIP00000038070	PUF	PF00806.19	3.5e-71	7	8
ENSRBIP00000038070	PUF	PF00806.19	3.5e-71	8	8
ENSRBIP00000038056	PUF	PF00806.19	3e-70	1	8
ENSRBIP00000038056	PUF	PF00806.19	3e-70	2	8
ENSRBIP00000038056	PUF	PF00806.19	3e-70	3	8
ENSRBIP00000038056	PUF	PF00806.19	3e-70	4	8
ENSRBIP00000038056	PUF	PF00806.19	3e-70	5	8
ENSRBIP00000038056	PUF	PF00806.19	3e-70	6	8
ENSRBIP00000038056	PUF	PF00806.19	3e-70	7	8
ENSRBIP00000038056	PUF	PF00806.19	3e-70	8	8
ENSRBIP00000038049	PUF	PF00806.19	3.4e-70	1	8
ENSRBIP00000038049	PUF	PF00806.19	3.4e-70	2	8
ENSRBIP00000038049	PUF	PF00806.19	3.4e-70	3	8
ENSRBIP00000038049	PUF	PF00806.19	3.4e-70	4	8
ENSRBIP00000038049	PUF	PF00806.19	3.4e-70	5	8
ENSRBIP00000038049	PUF	PF00806.19	3.4e-70	6	8
ENSRBIP00000038049	PUF	PF00806.19	3.4e-70	7	8
ENSRBIP00000038049	PUF	PF00806.19	3.4e-70	8	8
ENSRBIP00000038045	PUF	PF00806.19	6.4e-70	1	8
ENSRBIP00000038045	PUF	PF00806.19	6.4e-70	2	8
ENSRBIP00000038045	PUF	PF00806.19	6.4e-70	3	8
ENSRBIP00000038045	PUF	PF00806.19	6.4e-70	4	8
ENSRBIP00000038045	PUF	PF00806.19	6.4e-70	5	8
ENSRBIP00000038045	PUF	PF00806.19	6.4e-70	6	8
ENSRBIP00000038045	PUF	PF00806.19	6.4e-70	7	8
ENSRBIP00000038045	PUF	PF00806.19	6.4e-70	8	8
ENSRBIP00000038063	PUF	PF00806.19	8.4e-70	1	8
ENSRBIP00000038063	PUF	PF00806.19	8.4e-70	2	8
ENSRBIP00000038063	PUF	PF00806.19	8.4e-70	3	8
ENSRBIP00000038063	PUF	PF00806.19	8.4e-70	4	8
ENSRBIP00000038063	PUF	PF00806.19	8.4e-70	5	8
ENSRBIP00000038063	PUF	PF00806.19	8.4e-70	6	8
ENSRBIP00000038063	PUF	PF00806.19	8.4e-70	7	8
ENSRBIP00000038063	PUF	PF00806.19	8.4e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000062060	PUM1-201	7124	XM_017857035	ENSRBIP00000038045	1188 (aa)	XP_017712524	A0A2K6MQI4
ENSRBIT00000062071	PUM1-203	5216	XM_017857045	ENSRBIP00000038056	1092 (aa)	XP_017712534	A0A2K6MQM9
ENSRBIT00000062064	PUM1-202	6887	XM_017857043	ENSRBIP00000038049	1109 (aa)	XP_017712532	A0A2K6MQH1
ENSRBIT00000062089	PUM1-206	375	-	ENSRBIP00000038073	124 (aa)	-	A0A2K6MQM8
ENSRBIT00000062086	PUM1-205	2835	-	ENSRBIP00000038070	944 (aa)	-	A0A2K6MQL0
ENSRBIT00000062078	PUM1-204	3672	-	ENSRBIP00000038063	1223 (aa)	-	A0A2K6MQL9
ENSRBIT00000062091	PUM1-207	297	-	ENSRBIP00000038075	98 (aa)	-	A0A2K6MQL4

Gene Model

Click here to download ENSRBIG00000042521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000042521's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000042521	PUM1	86	87.354	ENSRBIG00000044880	PUM2	100	88.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000042521	PUM1	100	100.000	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSRBIG00000042521	PUM1	90	91.566	ENSAPOG00000021632	pum1	100	91.084	Acanthochromis_polyacanthus
ENSRBIG00000042521	PUM1	100	100.000	ENSAMEG00000017656	PUM1	99	97.952	Ailuropoda_melanoleuca
ENSRBIG00000042521	PUM1	100	81.312	ENSACIG00000021013	pum1	93	91.084	Amphilophus_citrinellus
ENSRBIG00000042521	PUM1	90	91.566	ENSAOCG00000003944	pum1	94	91.566	Amphiprion_ocellaris
ENSRBIG00000042521	PUM1	90	91.566	ENSAPEG00000014550	pum1	94	91.566	Amphiprion_percula
ENSRBIG00000042521	PUM1	100	92.048	ENSATEG00000016004	pum1	100	91.084	Anabas_testudineus
ENSRBIG00000042521	PUM1	100	98.792	ENSAPLG00000009351	PUM1	100	97.645	Anas_platyrhynchos
ENSRBIG00000042521	PUM1	100	98.792	ENSACAG00000000682	PUM1	99	95.725	Anolis_carolinensis
ENSRBIG00000042521	PUM1	100	100.000	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSRBIG00000042521	PUM1	90	76.738	ENSACLG00000019354	pum1	100	79.001	Astatotilapia_calliptera
ENSRBIG00000042521	PUM1	100	93.237	ENSAMXG00000020607	pum1	92	93.237	Astyanax_mexicanus
ENSRBIG00000042521	PUM1	100	100.000	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSRBIG00000042521	PUM1	100	100.000	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSRBIG00000042521	PUM1	100	100.000	ENSCAFG00000011205	PUM1	100	97.140	Canis_familiaris
ENSRBIG00000042521	PUM1	90	99.758	ENSCAFG00020024616	PUM1	99	98.672	Canis_lupus_dingo
ENSRBIG00000042521	PUM1	100	100.000	ENSCHIG00000012952	PUM1	100	99.411	Capra_hircus
ENSRBIG00000042521	PUM1	100	100.000	ENSTSYG00000008868	PUM1	100	99.682	Carlito_syrichta
ENSRBIG00000042521	PUM1	100	99.517	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSRBIG00000042521	PUM1	100	100.000	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSRBIG00000042521	PUM1	100	99.517	ENSCLAG00000007662	PUM1	100	99.359	Chinchilla_lanigera
ENSRBIG00000042521	PUM1	100	100.000	ENSCSAG00000001028	PUM1	100	99.000	Chlorocebus_sabaeus
ENSRBIG00000042521	PUM1	99	96.547	ENSCHOG00000010245	PUM1	93	96.547	Choloepus_hoffmanni
ENSRBIG00000042521	PUM1	100	98.551	ENSCPBG00000009288	PUM1	100	98.068	Chrysemys_picta_bellii
ENSRBIG00000042521	PUM1	100	100.000	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSRBIG00000042521	PUM1	100	99.306	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSRBIG00000042521	PUM1	100	99.306	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSRBIG00000042521	PUM1	85	81.041	ENSCSEG00000015981	pum1	100	77.706	Cynoglossus_semilaevis
ENSRBIG00000042521	PUM1	100	80.817	ENSCVAG00000007043	pum1	100	75.785	Cyprinodon_variegatus
ENSRBIG00000042521	PUM1	100	93.478	ENSDARG00000099256	pum1	95	94.408	Danio_rerio
ENSRBIG00000042521	PUM1	100	100.000	ENSDNOG00000010939	PUM1	100	99.159	Dasypus_novemcinctus
ENSRBIG00000042521	PUM1	89	98.283	ENSDORG00000001875	Pum1	100	99.034	Dipodomys_ordii
ENSRBIG00000042521	PUM1	85	100.000	ENSETEG00000004355	PUM1	87	93.945	Echinops_telfairi
ENSRBIG00000042521	PUM1	100	100.000	ENSEASG00005010813	PUM1	100	99.242	Equus_asinus_asinus
ENSRBIG00000042521	PUM1	100	99.306	ENSECAG00000021369	PUM1	100	99.075	Equus_caballus
ENSRBIG00000042521	PUM1	80	100.000	ENSEEUG00000003871	PUM1	77	100.000	Erinaceus_europaeus
ENSRBIG00000042521	PUM1	100	83.354	ENSELUG00000002409	pum1	95	93.720	Esox_lucius
ENSRBIG00000042521	PUM1	100	100.000	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSRBIG00000042521	PUM1	100	98.792	ENSFALG00000001214	PUM1	99	94.224	Ficedula_albicollis
ENSRBIG00000042521	PUM1	100	99.513	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSRBIG00000042521	PUM1	91	91.566	ENSGMOG00000010491	pum1	94	91.084	Gadus_morhua
ENSRBIG00000042521	PUM1	100	98.792	ENSGALG00000042598	PUM1	100	97.896	Gallus_gallus
ENSRBIG00000042521	PUM1	100	80.941	ENSGAFG00000015617	pum1	100	90.361	Gambusia_affinis
ENSRBIG00000042521	PUM1	100	81.034	ENSGACG00000005717	pum1	94	91.325	Gasterosteus_aculeatus
ENSRBIG00000042521	PUM1	100	98.551	ENSGAGG00000001290	PUM1	99	98.583	Gopherus_agassizii
ENSRBIG00000042521	PUM1	100	100.000	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSRBIG00000042521	PUM1	100	81.064	ENSHBUG00000018718	pum1	100	76.364	Haplochromis_burtoni
ENSRBIG00000042521	PUM1	100	99.270	ENSHGLG00000013819	Pum1	100	99.084	Heterocephalus_glaber_female
ENSRBIG00000042521	PUM1	100	99.270	ENSHGLG00100008621	Pum1	100	99.084	Heterocephalus_glaber_male
ENSRBIG00000042521	PUM1	90	75.185	ENSHCOG00000005149	pum1	100	75.301	Hippocampus_comes
ENSRBIG00000042521	PUM1	100	92.512	ENSIPUG00000020421	pum1	93	92.512	Ictalurus_punctatus
ENSRBIG00000042521	PUM1	100	100.000	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSRBIG00000042521	PUM1	100	100.000	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSRBIG00000042521	PUM1	100	91.325	ENSKMAG00000003481	pum1	94	90.843	Kryptolebias_marmoratus
ENSRBIG00000042521	PUM1	100	92.048	ENSLBEG00000002527	pum1	94	91.566	Labrus_bergylta
ENSRBIG00000042521	PUM1	100	88.724	ENSLACG00000017188	PUM1	99	86.711	Latimeria_chalumnae
ENSRBIG00000042521	PUM1	100	96.860	ENSLOCG00000005210	pum1	95	96.860	Lepisosteus_oculatus
ENSRBIG00000042521	PUM1	100	99.034	ENSLAFG00000003178	PUM1	100	98.907	Loxodonta_africana
ENSRBIG00000042521	PUM1	100	100.000	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSRBIG00000042521	PUM1	100	100.000	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSRBIG00000042521	PUM1	100	100.000	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSRBIG00000042521	PUM1	100	100.000	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSRBIG00000042521	PUM1	100	91.807	ENSMAMG00000011606	pum1	94	91.325	Mastacembelus_armatus
ENSRBIG00000042521	PUM1	100	81.064	ENSMZEG00005005834	pum1	100	76.364	Maylandia_zebra
ENSRBIG00000042521	PUM1	100	98.792	ENSMGAG00000000724	PUM1	100	97.621	Meleagris_gallopavo
ENSRBIG00000042521	PUM1	100	99.517	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSRBIG00000042521	PUM1	100	99.758	ENSMICG00000007713	-	100	99.634	Microcebus_murinus
ENSRBIG00000042521	PUM1	99	97.887	ENSMICG00000012213	-	100	96.757	Microcebus_murinus
ENSRBIG00000042521	PUM1	100	99.275	ENSMOCG00000015463	Pum1	100	98.907	Microtus_ochrogaster
ENSRBIG00000042521	PUM1	90	88.276	ENSMMOG00000019817	pum1	100	90.843	Mola_mola
ENSRBIG00000042521	PUM1	100	98.068	ENSMODG00000017067	PUM1	100	97.899	Monodelphis_domestica
ENSRBIG00000042521	PUM1	90	88.506	ENSMALG00000016399	pum1	100	91.084	Monopterus_albus
ENSRBIG00000042521	PUM1	100	99.275	MGP_CAROLIEiJ_G0026549	Pum1	100	98.737	Mus_caroli
ENSRBIG00000042521	PUM1	100	99.517	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSRBIG00000042521	PUM1	100	99.517	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSRBIG00000042521	PUM1	100	99.517	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSRBIG00000042521	PUM1	100	100.000	ENSMPUG00000015454	PUM1	100	99.327	Mustela_putorius_furo
ENSRBIG00000042521	PUM1	100	100.000	ENSMLUG00000006490	PUM1	100	99.159	Myotis_lucifugus
ENSRBIG00000042521	PUM1	100	99.517	ENSNGAG00000002378	Pum1	100	99.364	Nannospalax_galili
ENSRBIG00000042521	PUM1	100	78.452	ENSNBRG00000010689	pum1	100	83.457	Neolamprologus_brichardi
ENSRBIG00000042521	PUM1	100	99.306	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSRBIG00000042521	PUM1	80	100.000	ENSMEUG00000000976	-	78	97.297	Notamacropus_eugenii
ENSRBIG00000042521	PUM1	84	100.000	ENSOPRG00000001776	PUM1	73	100.000	Ochotona_princeps
ENSRBIG00000042521	PUM1	100	99.517	ENSODEG00000003465	PUM1	100	99.242	Octodon_degus
ENSRBIG00000042521	PUM1	100	91.807	ENSONIG00000002290	pum1	94	91.325	Oreochromis_niloticus
ENSRBIG00000042521	PUM1	80	83.077	ENSOANG00000004902	-	100	77.766	Ornithorhynchus_anatinus
ENSRBIG00000042521	PUM1	100	100.000	ENSOCUG00000008641	PUM1	99	98.823	Oryctolagus_cuniculus
ENSRBIG00000042521	PUM1	100	81.931	ENSORLG00000011482	pum1	94	91.084	Oryzias_latipes
ENSRBIG00000042521	PUM1	100	93.494	ENSORLG00020019461	pum1	94	91.084	Oryzias_latipes_hni
ENSRBIG00000042521	PUM1	100	82.054	ENSORLG00015011375	pum1	94	91.084	Oryzias_latipes_hsok
ENSRBIG00000042521	PUM1	90	92.771	ENSOMEG00000009312	pum1	100	76.770	Oryzias_melastigma
ENSRBIG00000042521	PUM1	100	99.306	ENSOGAG00000011063	PUM1	100	96.893	Otolemur_garnettii
ENSRBIG00000042521	PUM1	100	100.000	ENSOARG00000001899	PUM1	100	99.758	Ovis_aries
ENSRBIG00000042521	PUM1	100	100.000	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSRBIG00000042521	PUM1	100	100.000	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSRBIG00000042521	PUM1	100	100.000	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSRBIG00000042521	PUM1	100	100.000	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSRBIG00000042521	PUM1	100	100.000	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSRBIG00000042521	PUM1	94	93.932	ENSPKIG00000010578	pum1	100	78.383	Paramormyrops_kingsleyae
ENSRBIG00000042521	PUM1	100	98.551	ENSPSIG00000014118	PUM1	100	97.980	Pelodiscus_sinensis
ENSRBIG00000042521	PUM1	100	76.819	ENSPMGG00000005836	pum1	100	81.907	Periophthalmus_magnuspinnatus
ENSRBIG00000042521	PUM1	100	99.517	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSRBIG00000042521	PUM1	100	98.068	ENSPCIG00000014151	PUM1	100	98.134	Phascolarctos_cinereus
ENSRBIG00000042521	PUM1	94	91.325	ENSPFOG00000007289	pum1	93	90.843	Poecilia_formosa
ENSRBIG00000042521	PUM1	100	91.325	ENSPLAG00000007256	pum1	94	90.843	Poecilia_latipinna
ENSRBIG00000042521	PUM1	89	91.325	ENSPMEG00000019543	pum1	92	90.843	Poecilia_mexicana
ENSRBIG00000042521	PUM1	100	80.941	ENSPREG00000005195	pum1	100	80.970	Poecilia_reticulata
ENSRBIG00000042521	PUM1	100	100.000	ENSPPYG00000001621	PUM1	100	98.020	Pongo_abelii
ENSRBIG00000042521	PUM1	84	99.383	ENSPCAG00000001979	PUM1	76	99.383	Procavia_capensis
ENSRBIG00000042521	PUM1	100	99.758	ENSPCOG00000004398	PUM1	100	99.634	Propithecus_coquereli
ENSRBIG00000042521	PUM1	100	100.000	ENSPVAG00000005207	PUM1	100	95.503	Pteropus_vampyrus
ENSRBIG00000042521	PUM1	100	81.064	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSRBIG00000042521	PUM1	100	93.478	ENSPNAG00000026728	pum1	95	93.478	Pygocentrus_nattereri
ENSRBIG00000042521	PUM1	100	99.306	ENSRNOG00000011709	Pum1	100	98.822	Rattus_norvegicus
ENSRBIG00000042521	PUM1	100	100.000	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000042521	PUM1	100	100.000	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSRBIG00000042521	PUM1	100	98.068	ENSSHAG00000010918	PUM1	100	97.815	Sarcophilus_harrisii
ENSRBIG00000042521	PUM1	100	92.048	ENSSMAG00000010918	pum1	100	91.084	Scophthalmus_maximus
ENSRBIG00000042521	PUM1	100	92.048	ENSSDUG00000009021	pum1	94	91.566	Seriola_dumerili
ENSRBIG00000042521	PUM1	95	92.048	ENSSLDG00000009667	pum1	93	91.566	Seriola_lalandi_dorsalis
ENSRBIG00000042521	PUM1	99	100.000	ENSSARG00000003055	PUM1	93	98.206	Sorex_araneus
ENSRBIG00000042521	PUM1	100	98.792	ENSSPUG00000006267	PUM1	100	97.306	Sphenodon_punctatus
ENSRBIG00000042521	PUM1	90	91.566	ENSSPAG00000016636	pum1	94	91.566	Stegastes_partitus
ENSRBIG00000042521	PUM1	100	100.000	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSRBIG00000042521	PUM1	100	92.048	ENSTRUG00000013121	pum1	94	91.566	Takifugu_rubripes
ENSRBIG00000042521	PUM1	100	91.827	ENSTNIG00000016983	pum1	93	91.346	Tetraodon_nigroviridis
ENSRBIG00000042521	PUM1	84	100.000	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSRBIG00000042521	PUM1	92	99.453	ENSTTRG00000007436	PUM1	90	99.453	Tursiops_truncatus
ENSRBIG00000042521	PUM1	99	99.077	ENSUAMG00000018262	-	100	99.077	Ursus_americanus
ENSRBIG00000042521	PUM1	100	99.459	ENSUMAG00000009211	PUM1	100	99.758	Ursus_maritimus
ENSRBIG00000042521	PUM1	100	99.306	ENSVPAG00000005902	PUM1	92	99.664	Vicugna_pacos
ENSRBIG00000042521	PUM1	100	100.000	ENSVVUG00000014631	PUM1	100	99.758	Vulpes_vulpes
ENSRBIG00000042521	PUM1	100	89.372	ENSXETG00000012904	pum1	99	87.688	Xenopus_tropicalis
ENSRBIG00000042521	PUM1	100	91.325	ENSXMAG00000002945	pum1	94	90.843	Xiphophorus_maculatus