EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000042818 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: ZCCHC25|ZFM1|ZNF162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 13693 bases
Position: chrMCGX01000834.1:848583-862275
Accession: 108542940
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000038756	KH_1	PF00013.29	2e-07	1	1
ENSRBIP00000038740	KH_1	PF00013.29	3.1e-07	1	1
ENSRBIP00000038749	KH_1	PF00013.29	3.9e-07	1	1
ENSRBIP00000038757	KH_1	PF00013.29	4.2e-07	1	1
ENSRBIP00000038726	KH_1	PF00013.29	4.2e-07	1	1
ENSRBIP00000038722	KH_1	PF00013.29	4.3e-07	1	1
ENSRBIP00000038756	zf-CCHC	PF00098.23	0.00019	1	1
ENSRBIP00000038740	zf-CCHC	PF00098.23	0.0002	1	1
ENSRBIP00000038749	zf-CCHC	PF00098.23	0.00024	1	1
ENSRBIP00000038726	zf-CCHC	PF00098.23	0.00026	1	1
ENSRBIP00000038722	zf-CCHC	PF00098.23	0.00027	1	1
ENSRBIP00000038757	zf-CCHC	PF00098.23	0.00027	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000062768	SF1-204	1746	-	ENSRBIP00000038749	581 (aa)	-	A0A2K6MSI6
ENSRBIT00000062785	SF1-207	333	-	ENSRBIP00000038766	110 (aa)	-	A0A2K6MSM9
ENSRBIT00000062745	SF1-202	1845	-	ENSRBIP00000038726	614 (aa)	-	A0A2K6MSJ0
ENSRBIT00000062775	SF1-205	1254	-	ENSRBIP00000038756	417 (aa)	-	A0A2K6MSM2
ENSRBIT00000062741	SF1-201	1866	XM_017893225	ENSRBIP00000038722	621 (aa)	XP_017748714	A0A2K6MSJ9
ENSRBIT00000062776	SF1-206	1869	-	ENSRBIP00000038757	622 (aa)	-	A0A2K6MSN1
ENSRBIT00000062759	SF1-203	1602	-	ENSRBIP00000038740	533 (aa)	-	A0A2K6MSH7

Gene Model

Click here to download ENSRBIG00000042818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000042818's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000042818	SF1	91	80.670	ENSAPOG00000012341	sf1	56	80.307	Acanthochromis_polyacanthus
ENSRBIG00000042818	SF1	90	99.465	ENSAMEG00000017828	SF1	78	100.000	Ailuropoda_melanoleuca
ENSRBIG00000042818	SF1	89	82.713	ENSACIG00000016514	sf1	62	78.043	Amphilophus_citrinellus
ENSRBIG00000042818	SF1	91	80.155	ENSAOCG00000010934	sf1	61	75.878	Amphiprion_ocellaris
ENSRBIG00000042818	SF1	91	80.155	ENSAPEG00000009498	sf1	61	75.878	Amphiprion_percula
ENSRBIG00000042818	SF1	89	81.579	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSRBIG00000042818	SF1	100	95.775	ENSANAG00000026664	-	100	95.775	Aotus_nancymaae
ENSRBIG00000042818	SF1	96	83.252	ENSANAG00000022607	-	99	82.810	Aotus_nancymaae
ENSRBIG00000042818	SF1	88	84.282	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSRBIG00000042818	SF1	88	85.829	ENSAMXG00000003630	sf1	50	79.462	Astyanax_mexicanus
ENSRBIG00000042818	SF1	100	95.931	ENSBTAG00000001035	SF1	100	95.931	Bos_taurus
ENSRBIG00000042818	SF1	100	95.931	ENSCJAG00000002780	SF1	100	95.931	Callithrix_jacchus
ENSRBIG00000042818	SF1	100	95.925	ENSCAFG00000014239	SF1	100	95.925	Canis_familiaris
ENSRBIG00000042818	SF1	100	95.931	ENSCAFG00020014381	SF1	100	95.931	Canis_lupus_dingo
ENSRBIG00000042818	SF1	100	95.931	ENSCHIG00000025867	SF1	100	95.931	Capra_hircus
ENSRBIG00000042818	SF1	82	98.925	ENSTSYG00000033618	SF1	98	98.925	Carlito_syrichta
ENSRBIG00000042818	SF1	89	99.191	ENSCAPG00000010762	SF1	100	90.179	Cavia_aperea
ENSRBIG00000042818	SF1	98	95.375	ENSCPOG00000012290	SF1	100	95.375	Cavia_porcellus
ENSRBIG00000042818	SF1	99	82.410	ENSCCAG00000023781	-	90	87.879	Cebus_capucinus
ENSRBIG00000042818	SF1	100	95.925	ENSCCAG00000037881	SF1	96	100.000	Cebus_capucinus
ENSRBIG00000042818	SF1	100	97.883	ENSCATG00000011564	SF1	100	97.883	Cercocebus_atys
ENSRBIG00000042818	SF1	92	99.738	ENSCSAG00000007258	SF1	90	99.796	Chlorocebus_sabaeus
ENSRBIG00000042818	SF1	84	92.571	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSRBIG00000042818	SF1	88	92.683	ENSCPBG00000023763	SF1	59	89.301	Chrysemys_picta_bellii
ENSRBIG00000042818	SF1	74	67.093	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSRBIG00000042818	SF1	86	59.137	ENSCSAVG00000009055	-	72	63.787	Ciona_savignyi
ENSRBIG00000042818	SF1	100	95.931	ENSCANG00000042201	SF1	100	95.931	Colobus_angolensis_palliatus
ENSRBIG00000042818	SF1	100	95.462	ENSCGRG00001003677	Sf1	100	95.462	Cricetulus_griseus_chok1gshd
ENSRBIG00000042818	SF1	89	98.922	ENSCGRG00000001708	Sf1	100	90.000	Cricetulus_griseus_crigri
ENSRBIG00000042818	SF1	89	80.366	ENSCSEG00000014375	sf1	57	76.513	Cynoglossus_semilaevis
ENSRBIG00000042818	SF1	89	84.324	ENSCVAG00000001670	sf1	63	79.703	Cyprinodon_variegatus
ENSRBIG00000042818	SF1	92	82.474	ENSDARG00000008188	sf1	72	78.788	Danio_rerio
ENSRBIG00000042818	SF1	92	98.953	ENSDNOG00000001282	SF1	90	99.185	Dasypus_novemcinctus
ENSRBIG00000042818	SF1	100	95.931	ENSDORG00000016334	Sf1	100	95.931	Dipodomys_ordii
ENSRBIG00000042818	SF1	91	88.034	ENSETEG00000012830	SF1	82	88.034	Echinops_telfairi
ENSRBIG00000042818	SF1	92	99.215	ENSEASG00005018272	SF1	90	99.389	Equus_asinus_asinus
ENSRBIG00000042818	SF1	92	99.476	ENSECAG00000024544	SF1	90	99.593	Equus_caballus
ENSRBIG00000042818	SF1	79	98.780	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSRBIG00000042818	SF1	88	81.432	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSRBIG00000042818	SF1	100	95.925	ENSFCAG00000012231	SF1	100	95.925	Felis_catus
ENSRBIG00000042818	SF1	89	99.730	ENSFDAG00000009833	SF1	100	90.714	Fukomys_damarensis
ENSRBIG00000042818	SF1	91	80.155	ENSFHEG00000022656	sf1	61	76.102	Fundulus_heteroclitus
ENSRBIG00000042818	SF1	79	87.941	ENSGMOG00000007469	sf1	62	87.941	Gadus_morhua
ENSRBIG00000042818	SF1	91	83.896	ENSGAFG00000019284	sf1	78	80.238	Gambusia_affinis
ENSRBIG00000042818	SF1	92	80.612	ENSGACG00000000826	sf1	66	80.102	Gasterosteus_aculeatus
ENSRBIG00000042818	SF1	88	92.412	ENSGAGG00000021691	SF1	64	89.934	Gopherus_agassizii
ENSRBIG00000042818	SF1	89	82.895	ENSHBUG00000011598	sf1	61	77.262	Haplochromis_burtoni
ENSRBIG00000042818	SF1	100	95.768	ENSHGLG00000009541	SF1	100	95.768	Heterocephalus_glaber_female
ENSRBIG00000042818	SF1	73	93.399	ENSHGLG00100008076	-	87	87.067	Heterocephalus_glaber_male
ENSRBIG00000042818	SF1	92	89.005	ENSHGLG00100008255	-	94	86.345	Heterocephalus_glaber_male
ENSRBIG00000042818	SF1	89	99.730	ENSHGLG00100013879	-	100	90.714	Heterocephalus_glaber_male
ENSRBIG00000042818	SF1	89	80.628	ENSHCOG00000011388	sf1	55	80.106	Hippocampus_comes
ENSRBIG00000042818	SF1	89	89.247	ENSSTOG00000024353	-	98	76.964	Ictidomys_tridecemlineatus
ENSRBIG00000042818	SF1	98	95.860	ENSSTOG00000009790	-	100	95.860	Ictidomys_tridecemlineatus
ENSRBIG00000042818	SF1	100	95.775	ENSJJAG00000011788	Sf1	100	95.775	Jaculus_jaculus
ENSRBIG00000042818	SF1	91	81.841	ENSKMAG00000005854	sf1	63	77.283	Kryptolebias_marmoratus
ENSRBIG00000042818	SF1	89	82.199	ENSLBEG00000019836	sf1	64	78.230	Labrus_bergylta
ENSRBIG00000042818	SF1	90	81.053	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSRBIG00000042818	SF1	88	85.294	ENSLOCG00000002130	sf1	57	84.946	Lepisosteus_oculatus
ENSRBIG00000042818	SF1	99	91.628	ENSLAFG00000007201	SF1	100	91.628	Loxodonta_africana
ENSRBIG00000042818	SF1	100	97.883	ENSMFAG00000033122	SF1	100	97.883	Macaca_fascicularis
ENSRBIG00000042818	SF1	100	95.925	ENSMMUG00000022606	SF1	99	99.509	Macaca_mulatta
ENSRBIG00000042818	SF1	100	97.883	ENSMNEG00000037901	SF1	100	97.883	Macaca_nemestrina
ENSRBIG00000042818	SF1	98	95.866	ENSMLEG00000040706	SF1	100	93.062	Mandrillus_leucophaeus
ENSRBIG00000042818	SF1	91	80.928	ENSMAMG00000001780	sf1	58	77.966	Mastacembelus_armatus
ENSRBIG00000042818	SF1	89	82.632	ENSMZEG00005009196	sf1	61	77.030	Maylandia_zebra
ENSRBIG00000042818	SF1	100	95.141	ENSMAUG00000014064	Sf1	100	95.141	Mesocricetus_auratus
ENSRBIG00000042818	SF1	100	95.775	ENSMICG00000001202	SF1	100	95.775	Microcebus_murinus
ENSRBIG00000042818	SF1	100	95.141	ENSMOCG00000022038	Sf1	100	95.141	Microtus_ochrogaster
ENSRBIG00000042818	SF1	88	81.720	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSRBIG00000042818	SF1	89	98.391	ENSMODG00000029407	SF1	99	92.593	Monodelphis_domestica
ENSRBIG00000042818	SF1	89	82.888	ENSMALG00000020521	sf1	68	76.359	Monopterus_albus
ENSRBIG00000042818	SF1	100	95.305	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSRBIG00000042818	SF1	100	95.305	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSRBIG00000042818	SF1	100	95.305	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSRBIG00000042818	SF1	100	95.305	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSRBIG00000042818	SF1	99	95.721	ENSMPUG00000012684	SF1	99	95.721	Mustela_putorius_furo
ENSRBIG00000042818	SF1	92	95.288	ENSMLUG00000029800	-	78	94.934	Myotis_lucifugus
ENSRBIG00000042818	SF1	99	95.721	ENSMLUG00000015217	-	99	95.721	Myotis_lucifugus
ENSRBIG00000042818	SF1	100	95.611	ENSNGAG00000005550	Sf1	100	95.611	Nannospalax_galili
ENSRBIG00000042818	SF1	88	84.282	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSRBIG00000042818	SF1	100	95.775	ENSNLEG00000005236	-	100	95.775	Nomascus_leucogenys
ENSRBIG00000042818	SF1	88	98.630	ENSMEUG00000013424	SF1	85	98.891	Notamacropus_eugenii
ENSRBIG00000042818	SF1	79	99.390	ENSOPRG00000005008	SF1	88	99.314	Ochotona_princeps
ENSRBIG00000042818	SF1	100	92.114	ENSODEG00000006102	-	100	91.456	Octodon_degus
ENSRBIG00000042818	SF1	89	82.895	ENSONIG00000015728	sf1	61	77.262	Oreochromis_niloticus
ENSRBIG00000042818	SF1	72	88.119	ENSOANG00000002909	SF1	97	87.817	Ornithorhynchus_anatinus
ENSRBIG00000042818	SF1	99	95.714	ENSOCUG00000026486	SF1	100	95.714	Oryctolagus_cuniculus
ENSRBIG00000042818	SF1	89	81.102	ENSORLG00000011853	sf1	58	76.998	Oryzias_latipes
ENSRBIG00000042818	SF1	91	79.744	ENSORLG00020011834	sf1	60	75.587	Oryzias_latipes_hni
ENSRBIG00000042818	SF1	89	80.577	ENSORLG00015012855	sf1	59	76.499	Oryzias_latipes_hsok
ENSRBIG00000042818	SF1	91	80.256	ENSOMEG00000005210	sf1	60	77.458	Oryzias_melastigma
ENSRBIG00000042818	SF1	100	95.768	ENSOGAG00000016196	SF1	100	95.768	Otolemur_garnettii
ENSRBIG00000042818	SF1	92	99.738	ENSOARG00000009166	SF1	84	99.790	Ovis_aries
ENSRBIG00000042818	SF1	99	95.146	ENSPPAG00000002799	-	100	95.759	Pan_paniscus
ENSRBIG00000042818	SF1	98	95.853	ENSPPRG00000013566	SF1	100	95.759	Panthera_pardus
ENSRBIG00000042818	SF1	91	98.942	ENSPTIG00000016141	SF1	99	90.433	Panthera_tigris_altaica
ENSRBIG00000042818	SF1	100	95.925	ENSPTRG00000003846	SF1	99	100.000	Pan_troglodytes
ENSRBIG00000042818	SF1	100	95.465	ENSPANG00000020754	SF1	100	94.737	Papio_anubis
ENSRBIG00000042818	SF1	74	80.189	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSRBIG00000042818	SF1	63	89.811	ENSPSIG00000003610	SF1	69	86.969	Pelodiscus_sinensis
ENSRBIG00000042818	SF1	100	95.298	ENSPEMG00000010463	Sf1	100	95.298	Peromyscus_maniculatus_bairdii
ENSRBIG00000042818	SF1	81	72.107	ENSPMAG00000008272	sf1	53	66.938	Petromyzon_marinus
ENSRBIG00000042818	SF1	100	94.514	ENSPCIG00000018173	SF1	100	94.514	Phascolarctos_cinereus
ENSRBIG00000042818	SF1	91	85.752	ENSPFOG00000013683	sf1	68	81.146	Poecilia_formosa
ENSRBIG00000042818	SF1	88	83.862	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSRBIG00000042818	SF1	88	83.862	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSRBIG00000042818	SF1	90	82.292	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSRBIG00000042818	SF1	100	95.768	ENSPPYG00000003098	-	100	95.768	Pongo_abelii
ENSRBIG00000042818	SF1	89	98.925	ENSPCAG00000013631	SF1	72	99.168	Procavia_capensis
ENSRBIG00000042818	SF1	100	95.775	ENSPCOG00000027546	SF1	100	95.775	Propithecus_coquereli
ENSRBIG00000042818	SF1	89	98.925	ENSPVAG00000016938	SF1	80	94.249	Pteropus_vampyrus
ENSRBIG00000042818	SF1	89	82.632	ENSPNYG00000004673	sf1	59	78.199	Pundamilia_nyererei
ENSRBIG00000042818	SF1	89	85.185	ENSPNAG00000013072	sf1	59	80.535	Pygocentrus_nattereri
ENSRBIG00000042818	SF1	100	95.305	ENSRNOG00000021085	Sf1	100	95.305	Rattus_norvegicus
ENSRBIG00000042818	SF1	100	94.019	ENSRROG00000045655	SF1	100	93.525	Rhinopithecus_roxellana
ENSRBIG00000042818	SF1	86	39.098	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSRBIG00000042818	SF1	97	80.556	ENSSBOG00000022267	-	99	81.731	Saimiri_boliviensis_boliviensis
ENSRBIG00000042818	SF1	91	93.005	ENSSHAG00000006841	SF1	75	93.171	Sarcophilus_harrisii
ENSRBIG00000042818	SF1	89	82.058	ENSSFOG00015021978	sf1	53	82.796	Scleropages_formosus
ENSRBIG00000042818	SF1	89	79.896	ENSSMAG00000007549	sf1	63	76.291	Scophthalmus_maximus
ENSRBIG00000042818	SF1	91	80.206	ENSSDUG00000003903	sf1	63	76.402	Seriola_dumerili
ENSRBIG00000042818	SF1	91	80.206	ENSSLDG00000013075	sf1	61	76.402	Seriola_lalandi_dorsalis
ENSRBIG00000042818	SF1	89	94.340	ENSSARG00000008180	SF1	93	92.083	Sorex_araneus
ENSRBIG00000042818	SF1	85	92.416	ENSSPUG00000012907	SF1	77	85.065	Sphenodon_punctatus
ENSRBIG00000042818	SF1	91	80.928	ENSSPAG00000019060	sf1	61	75.878	Stegastes_partitus
ENSRBIG00000042818	SF1	100	95.775	ENSSSCG00000013021	SF1	100	95.775	Sus_scrofa
ENSRBIG00000042818	SF1	92	72.379	ENSTNIG00000004820	sf1	80	70.023	Tetraodon_nigroviridis
ENSRBIG00000042818	SF1	88	100.000	ENSTBEG00000013133	SF1	79	100.000	Tupaia_belangeri
ENSRBIG00000042818	SF1	88	93.750	ENSTTRG00000008857	SF1	99	88.257	Tursiops_truncatus
ENSRBIG00000042818	SF1	82	92.176	ENSUAMG00000011977	SF1	100	92.176	Ursus_americanus
ENSRBIG00000042818	SF1	96	98.879	ENSUMAG00000007268	SF1	99	93.421	Ursus_maritimus
ENSRBIG00000042818	SF1	65	100.000	ENSVPAG00000011912	SF1	66	100.000	Vicugna_pacos
ENSRBIG00000042818	SF1	92	99.738	ENSVVUG00000028585	SF1	90	99.796	Vulpes_vulpes
ENSRBIG00000042818	SF1	88	86.327	ENSXETG00000008434	sf1	58	93.353	Xenopus_tropicalis
ENSRBIG00000042818	SF1	88	84.932	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSRBIG00000042818	SF1	89	83.113	ENSXMAG00000007822	sf1	61	79.710	Xiphophorus_maculatus