EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000042829 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3B-like
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 34346 bases
Position: chrMCGX01020304.1:99115-133460
Accession: 108521469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000038646	APOBEC_N	PF08210.11	9.8e-97	1	2
ENSRBIP00000038646	APOBEC_N	PF08210.11	9.8e-97	2	2
ENSRBIP00000038651	APOBEC_N	PF08210.11	6.8e-47	1	1
ENSRBIP00000038655	APOBEC_N	PF08210.11	8.5e-47	1	1
ENSRBIP00000038646	APOBEC_C	PF05240.14	6.1e-59	1	2
ENSRBIP00000038646	APOBEC_C	PF05240.14	6.1e-59	2	2
ENSRBIP00000038651	APOBEC_C	PF05240.14	1.6e-30	1	1
ENSRBIP00000038655	APOBEC_C	PF05240.14	1.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000062670	-	1304	-	ENSRBIP00000038651	187 (aa)	-	A0A2K6MSA9
ENSRBIT00000062665	-	1881	XM_017861320	ENSRBIP00000038646	382 (aa)	XP_017716809	A0A2K6MSA4
ENSRBIT00000062674	-	1452	XM_017861263	ENSRBIP00000038655	199 (aa)	XP_017716752	A0A2K6MS99

Gene Model

Click here to download ENSRBIG00000042829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000042829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000042829	-	97	44.920	ENSRBIG00000026659	AICDA	97	42.667
ENSRBIG00000042829	-	97	30.288	ENSRBIG00000044756	APOBEC2	88	31.429
ENSRBIG00000042829	-	100	67.895	ENSRBIG00000035436	APOBEC3G	92	68.041
ENSRBIG00000042829	-	99	57.853	ENSRBIG00000030834	-	100	57.853
ENSRBIG00000042829	-	99	54.090	ENSRBIG00000042297	-	100	54.090
ENSRBIG00000042829	-	98	58.221	ENSRBIG00000030323	-	100	58.221
ENSRBIG00000042829	-	97	36.082	ENSRBIG00000029088	APOBEC3H	89	36.082

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000042829	-	100	84.555	ENSG00000179750	APOBEC3B	100	84.555	Homo_sapiens
ENSRBIG00000042829	-	100	85.027	ENSG00000128383	APOBEC3A	100	82.915	Homo_sapiens
ENSRBIG00000042829	-	98	56.757	ENSCJAG00000012500	-	100	56.757	Callithrix_jacchus
ENSRBIG00000042829	-	100	59.474	ENSTSYG00000035593	-	99	60.104	Carlito_syrichta
ENSRBIG00000042829	-	100	65.263	ENSCCAG00000027450	-	96	65.464	Cebus_capucinus
ENSRBIG00000042829	-	99	91.534	ENSCATG00000013527	-	100	87.624	Cercocebus_atys
ENSRBIG00000042829	-	77	83.673	ENSCSAG00000018401	-	70	83.673	Chlorocebus_sabaeus
ENSRBIG00000042829	-	99	91.005	ENSCSAG00000006445	-	77	91.005	Chlorocebus_sabaeus
ENSRBIG00000042829	-	100	95.187	ENSCANG00000030513	-	100	94.359	Colobus_angolensis_palliatus
ENSRBIG00000042829	-	100	82.199	ENSGGOG00000006721	APOBEC3B	100	82.199	Gorilla_gorilla
ENSRBIG00000042829	-	99	86.911	ENSMFAG00000008980	APOBEC3A	98	86.911	Macaca_fascicularis
ENSRBIG00000042829	-	100	85.789	ENSMMUG00000042504	APOBEC3A	100	85.149	Macaca_mulatta
ENSRBIG00000042829	-	99	89.947	ENSMMUG00000004015	-	98	90.104	Macaca_mulatta
ENSRBIG00000042829	-	99	88.182	ENSMNEG00000043211	-	95	88.182	Macaca_nemestrina
ENSRBIG00000042829	-	100	91.623	ENSMLEG00000004809	-	100	91.623	Mandrillus_leucophaeus
ENSRBIG00000042829	-	100	83.957	ENSNLEG00000015215	-	100	81.910	Nomascus_leucogenys
ENSRBIG00000042829	-	100	86.911	ENSPPAG00000009288	APOBEC3B	100	86.911	Pan_paniscus
ENSRBIG00000042829	-	100	83.422	ENSPTRG00000014384	APOBEC3B	100	81.407	Pan_troglodytes
ENSRBIG00000042829	-	99	90.341	ENSPANG00000006941	APOBEC3B	100	84.653	Papio_anubis
ENSRBIG00000042829	-	100	85.079	ENSPPYG00000011831	-	100	85.079	Pongo_abelii
ENSRBIG00000042829	-	76	60.135	ENSPCOG00000017606	-	95	60.135	Propithecus_coquereli
ENSRBIG00000042829	-	100	100.000	ENSRROG00000028773	APOBEC3G	100	100.000	Rhinopithecus_roxellana