EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000042892 (Gene tree)
Gene ID: -
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 55812 bases
Position: chrMCGX01001694.1:1168257-1224068
Accession: 108527550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000038819	DND1_DSRM	PF14709.7	1.3e-24	1	1
ENSRBIP00000038817	DND1_DSRM	PF14709.7	1.9e-17	1	1
ENSRBIP00000038819	RRM_1	PF00076.22	1.5e-28	1	3
ENSRBIP00000038819	RRM_1	PF00076.22	1.5e-28	2	3
ENSRBIP00000038819	RRM_1	PF00076.22	1.5e-28	3	3
ENSRBIP00000038817	RRM_1	PF00076.22	3.7e-28	1	3
ENSRBIP00000038817	RRM_1	PF00076.22	3.7e-28	2	3
ENSRBIP00000038817	RRM_1	PF00076.22	3.7e-28	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000062836	A1CF-201	1689	XM_017868877	ENSRBIP00000038817	562 (aa)	XP_017724366	A0A2K6MSU0
ENSRBIT00000062838	A1CF-202	1582	-	ENSRBIP00000038819	499 (aa)	-	A0A2K6MSQ5

Gene Model

Click here to download ENSRBIG00000042892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000042892's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000042892	A1CF	53	39.024	ENSRBIG00000028640	HNRNPR	53	41.762
ENSRBIG00000042892	A1CF	66	71.806	ENSRBIG00000032583	RBM46	85	64.667
ENSRBIG00000042892	A1CF	71	57.808	ENSRBIG00000039601	RBM47	87	62.248

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000042892	A1CF	100	96.620	ENSG00000148584	A1CF	100	91.457	Homo_sapiens
ENSRBIG00000042892	A1CF	100	72.047	ENSAPOG00000008259	a1cf	100	68.159	Acanthochromis_polyacanthus
ENSRBIG00000042892	A1CF	100	92.717	ENSAMEG00000000523	A1CF	100	89.394	Ailuropoda_melanoleuca
ENSRBIG00000042892	A1CF	100	74.423	ENSACIG00000008632	a1cf	100	71.220	Amphilophus_citrinellus
ENSRBIG00000042892	A1CF	100	72.868	ENSAOCG00000023744	a1cf	96	76.812	Amphiprion_ocellaris
ENSRBIG00000042892	A1CF	100	71.756	ENSAPEG00000009537	a1cf	100	70.704	Amphiprion_percula
ENSRBIG00000042892	A1CF	100	74.664	ENSATEG00000013720	a1cf	100	71.753	Anabas_testudineus
ENSRBIG00000042892	A1CF	100	86.444	ENSAPLG00000002964	A1CF	100	83.193	Anas_platyrhynchos
ENSRBIG00000042892	A1CF	100	83.234	ENSACAG00000015269	A1CF	100	77.311	Anolis_carolinensis
ENSRBIG00000042892	A1CF	100	97.012	ENSANAG00000019974	A1CF	100	90.101	Aotus_nancymaae
ENSRBIG00000042892	A1CF	100	72.481	ENSACLG00000017428	a1cf	100	70.049	Astatotilapia_calliptera
ENSRBIG00000042892	A1CF	100	76.967	ENSAMXG00000018180	a1cf	100	73.232	Astyanax_mexicanus
ENSRBIG00000042892	A1CF	100	93.241	ENSBTAG00000021195	A1CF	100	87.437	Bos_taurus
ENSRBIG00000042892	A1CF	100	95.882	ENSCJAG00000005045	A1CF	100	92.114	Callithrix_jacchus
ENSRBIG00000042892	A1CF	100	91.929	ENSCAFG00000015581	A1CF	100	89.226	Canis_familiaris
ENSRBIG00000042892	A1CF	100	91.929	ENSCAFG00020026421	A1CF	98	93.939	Canis_lupus_dingo
ENSRBIG00000042892	A1CF	100	91.389	ENSCHIG00000020411	A1CF	100	88.442	Capra_hircus
ENSRBIG00000042892	A1CF	100	96.200	ENSTSYG00000001755	A1CF	100	88.948	Carlito_syrichta
ENSRBIG00000042892	A1CF	100	94.215	ENSCAPG00000017386	A1CF	100	88.926	Cavia_aperea
ENSRBIG00000042892	A1CF	100	93.725	ENSCPOG00000009807	A1CF	100	89.597	Cavia_porcellus
ENSRBIG00000042892	A1CF	100	95.874	ENSCCAG00000018168	A1CF	100	92.101	Cebus_capucinus
ENSRBIG00000042892	A1CF	100	98.400	ENSCATG00000043715	A1CF	100	91.582	Cercocebus_atys
ENSRBIG00000042892	A1CF	100	93.164	ENSCLAG00000010424	A1CF	100	89.465	Chinchilla_lanigera
ENSRBIG00000042892	A1CF	100	96.850	ENSCSAG00000007032	A1CF	100	92.929	Chlorocebus_sabaeus
ENSRBIG00000042892	A1CF	100	92.475	ENSCHOG00000009089	A1CF	98	82.939	Choloepus_hoffmanni
ENSRBIG00000042892	A1CF	100	86.248	ENSCPBG00000026464	A1CF	100	82.857	Chrysemys_picta_bellii
ENSRBIG00000042892	A1CF	100	96.850	ENSCANG00000038032	A1CF	100	92.929	Colobus_angolensis_palliatus
ENSRBIG00000042892	A1CF	100	90.607	ENSCGRG00001017413	A1cf	100	87.605	Cricetulus_griseus_chok1gshd
ENSRBIG00000042892	A1CF	100	89.628	ENSCGRG00000017332	A1cf	100	87.437	Cricetulus_griseus_crigri
ENSRBIG00000042892	A1CF	100	72.780	ENSCSEG00000002361	a1cf	100	70.909	Cynoglossus_semilaevis
ENSRBIG00000042892	A1CF	100	73.321	ENSCVAG00000010520	a1cf	100	70.779	Cyprinodon_variegatus
ENSRBIG00000042892	A1CF	100	77.866	ENSDARG00000002968	a1cf	100	74.000	Danio_rerio
ENSRBIG00000042892	A1CF	100	91.977	ENSDNOG00000002829	A1CF	100	88.442	Dasypus_novemcinctus
ENSRBIG00000042892	A1CF	82	95.122	ENSETEG00000012527	A1CF	81	85.507	Echinops_telfairi
ENSRBIG00000042892	A1CF	100	92.982	ENSEASG00005012924	A1CF	100	89.816	Equus_asinus_asinus
ENSRBIG00000042892	A1CF	100	92.398	ENSECAG00000010424	A1CF	100	89.316	Equus_caballus
ENSRBIG00000042892	A1CF	90	80.310	ENSEEUG00000000013	A1CF	98	78.448	Erinaceus_europaeus
ENSRBIG00000042892	A1CF	100	76.070	ENSELUG00000003159	a1cf	100	74.624	Esox_lucius
ENSRBIG00000042892	A1CF	100	93.000	ENSFCAG00000011179	A1CF	100	87.037	Felis_catus
ENSRBIG00000042892	A1CF	100	85.629	ENSFALG00000013183	A1CF	100	80.000	Ficedula_albicollis
ENSRBIG00000042892	A1CF	100	93.837	ENSFDAG00000019371	A1CF	100	87.437	Fukomys_damarensis
ENSRBIG00000042892	A1CF	100	73.704	ENSFHEG00000019652	a1cf	100	70.050	Fundulus_heteroclitus
ENSRBIG00000042892	A1CF	100	69.482	ENSGMOG00000018943	a1cf	100	68.739	Gadus_morhua
ENSRBIG00000042892	A1CF	100	85.658	ENSGALG00000003765	A1CF	97	82.092	Gallus_gallus
ENSRBIG00000042892	A1CF	100	67.767	ENSGAFG00000014868	a1cf	100	66.831	Gambusia_affinis
ENSRBIG00000042892	A1CF	100	72.467	ENSGACG00000010241	a1cf	100	71.000	Gasterosteus_aculeatus
ENSRBIG00000042892	A1CF	100	86.051	ENSGAGG00000016508	A1CF	97	82.384	Gopherus_agassizii
ENSRBIG00000042892	A1CF	100	95.303	ENSGGOG00000009670	A1CF	100	91.625	Gorilla_gorilla
ENSRBIG00000042892	A1CF	100	73.654	ENSHBUG00000021959	a1cf	100	70.894	Haplochromis_burtoni
ENSRBIG00000042892	A1CF	100	93.151	ENSHGLG00000008955	A1CF	100	89.447	Heterocephalus_glaber_female
ENSRBIG00000042892	A1CF	100	92.368	ENSHGLG00100000518	A1CF	100	88.777	Heterocephalus_glaber_male
ENSRBIG00000042892	A1CF	100	66.983	ENSHCOG00000017669	a1cf	100	67.967	Hippocampus_comes
ENSRBIG00000042892	A1CF	88	80.752	ENSIPUG00000010367	a1cf	96	76.952	Ictalurus_punctatus
ENSRBIG00000042892	A1CF	100	73.208	ENSKMAG00000006568	a1cf	100	72.123	Kryptolebias_marmoratus
ENSRBIG00000042892	A1CF	99	71.673	ENSLBEG00000020994	a1cf	98	71.757	Labrus_bergylta
ENSRBIG00000042892	A1CF	100	80.754	ENSLACG00000008061	A1CF	100	75.753	Latimeria_chalumnae
ENSRBIG00000042892	A1CF	100	79.922	ENSLOCG00000006302	a1cf	100	77.295	Lepisosteus_oculatus
ENSRBIG00000042892	A1CF	100	92.172	ENSLAFG00000015462	A1CF	100	88.107	Loxodonta_africana
ENSRBIG00000042892	A1CF	100	98.800	ENSMFAG00000035948	A1CF	100	91.919	Macaca_fascicularis
ENSRBIG00000042892	A1CF	100	98.800	ENSMMUG00000007077	A1CF	100	91.919	Macaca_mulatta
ENSRBIG00000042892	A1CF	100	98.400	ENSMNEG00000031454	A1CF	100	91.582	Macaca_nemestrina
ENSRBIG00000042892	A1CF	100	96.850	ENSMLEG00000037223	A1CF	100	92.929	Mandrillus_leucophaeus
ENSRBIG00000042892	A1CF	100	71.815	ENSMAMG00000010402	a1cf	100	70.195	Mastacembelus_armatus
ENSRBIG00000042892	A1CF	100	72.461	ENSMZEG00005013245	a1cf	100	71.619	Maylandia_zebra
ENSRBIG00000042892	A1CF	100	85.882	ENSMGAG00000001507	A1CF	100	82.718	Meleagris_gallopavo
ENSRBIG00000042892	A1CF	100	89.824	ENSMAUG00000007422	A1cf	100	87.270	Mesocricetus_auratus
ENSRBIG00000042892	A1CF	100	94.466	ENSMICG00000003377	A1CF	100	87.667	Microcebus_murinus
ENSRBIG00000042892	A1CF	100	89.824	ENSMOCG00000021536	A1cf	100	87.270	Microtus_ochrogaster
ENSRBIG00000042892	A1CF	100	70.543	ENSMMOG00000009422	a1cf	100	68.227	Mola_mola
ENSRBIG00000042892	A1CF	90	89.404	ENSMODG00000016478	A1CF	99	83.364	Monodelphis_domestica
ENSRBIG00000042892	A1CF	100	70.238	ENSMALG00000012992	a1cf	100	66.946	Monopterus_albus
ENSRBIG00000042892	A1CF	100	91.252	MGP_CAROLIEiJ_G0022873	A1cf	100	87.270	Mus_caroli
ENSRBIG00000042892	A1CF	100	91.252	ENSMUSG00000052595	A1cf	99	93.603	Mus_musculus
ENSRBIG00000042892	A1CF	100	91.252	MGP_PahariEiJ_G0014366	A1cf	100	86.767	Mus_pahari
ENSRBIG00000042892	A1CF	100	90.656	MGP_SPRETEiJ_G0023792	A1cf	100	86.767	Mus_spretus
ENSRBIG00000042892	A1CF	98	88.554	ENSMPUG00000016971	A1CF	100	85.017	Mustela_putorius_furo
ENSRBIG00000042892	A1CF	100	90.607	ENSMLUG00000016071	A1CF	100	87.605	Myotis_lucifugus
ENSRBIG00000042892	A1CF	100	91.781	ENSNGAG00000015136	A1cf	100	88.442	Nannospalax_galili
ENSRBIG00000042892	A1CF	100	74.038	ENSNBRG00000001712	a1cf	100	71.220	Neolamprologus_brichardi
ENSRBIG00000042892	A1CF	100	96.282	ENSNLEG00000012028	A1CF	100	92.462	Nomascus_leucogenys
ENSRBIG00000042892	A1CF	100	90.220	ENSMEUG00000015909	A1CF	100	83.808	Notamacropus_eugenii
ENSRBIG00000042892	A1CF	87	79.592	ENSOPRG00000010667	A1CF	97	78.195	Ochotona_princeps
ENSRBIG00000042892	A1CF	100	73.269	ENSONIG00000019105	a1cf	100	70.894	Oreochromis_niloticus
ENSRBIG00000042892	A1CF	74	88.267	ENSOANG00000007360	A1CF	97	83.080	Ornithorhynchus_anatinus
ENSRBIG00000042892	A1CF	100	92.659	ENSOCUG00000011587	A1CF	100	87.124	Oryctolagus_cuniculus
ENSRBIG00000042892	A1CF	100	70.377	ENSORLG00000013342	a1cf	100	68.882	Oryzias_latipes
ENSRBIG00000042892	A1CF	100	72.053	ENSORLG00020000586	a1cf	100	70.684	Oryzias_latipes_hni
ENSRBIG00000042892	A1CF	100	72.243	ENSORLG00015018569	a1cf	100	70.847	Oryzias_latipes_hsok
ENSRBIG00000042892	A1CF	100	73.745	ENSOMEG00000013531	a1cf	100	69.494	Oryzias_melastigma
ENSRBIG00000042892	A1CF	100	92.717	ENSOGAG00000012884	A1CF	100	89.394	Otolemur_garnettii
ENSRBIG00000042892	A1CF	100	91.194	ENSOARG00000013695	A1CF	100	88.275	Ovis_aries
ENSRBIG00000042892	A1CF	100	95.303	ENSPPAG00000028115	A1CF	100	90.927	Pan_paniscus
ENSRBIG00000042892	A1CF	100	91.929	ENSPPRG00000012180	A1CF	100	88.721	Panthera_pardus
ENSRBIG00000042892	A1CF	100	91.929	ENSPTIG00000021223	A1CF	100	88.721	Panthera_tigris_altaica
ENSRBIG00000042892	A1CF	100	96.620	ENSPTRG00000002508	A1CF	100	91.457	Pan_troglodytes
ENSRBIG00000042892	A1CF	100	98.800	ENSPANG00000021988	A1CF	100	91.919	Papio_anubis
ENSRBIG00000042892	A1CF	100	78.599	ENSPKIG00000025176	a1cf	100	75.167	Paramormyrops_kingsleyae
ENSRBIG00000042892	A1CF	100	87.425	ENSPSIG00000010318	A1CF	100	81.513	Pelodiscus_sinensis
ENSRBIG00000042892	A1CF	86	69.284	ENSPMGG00000013359	a1cf	99	62.371	Periophthalmus_magnuspinnatus
ENSRBIG00000042892	A1CF	100	91.781	ENSPEMG00000015021	A1cf	100	88.442	Peromyscus_maniculatus_bairdii
ENSRBIG00000042892	A1CF	100	89.621	ENSPCIG00000002175	A1CF	100	83.697	Phascolarctos_cinereus
ENSRBIG00000042892	A1CF	100	72.401	ENSPFOG00000006683	a1cf	100	71.753	Poecilia_formosa
ENSRBIG00000042892	A1CF	100	72.212	ENSPFOG00000007437	-	100	71.591	Poecilia_formosa
ENSRBIG00000042892	A1CF	100	73.321	ENSPLAG00000001210	-	100	70.455	Poecilia_latipinna
ENSRBIG00000042892	A1CF	100	73.321	ENSPLAG00000000026	a1cf	100	70.455	Poecilia_latipinna
ENSRBIG00000042892	A1CF	100	64.706	ENSPMEG00000015529	-	100	65.139	Poecilia_mexicana
ENSRBIG00000042892	A1CF	100	65.703	ENSPMEG00000000921	a1cf	100	63.993	Poecilia_mexicana
ENSRBIG00000042892	A1CF	100	72.212	ENSPREG00000016298	a1cf	100	71.429	Poecilia_reticulata
ENSRBIG00000042892	A1CF	100	97.813	ENSPPYG00000002819	A1CF	100	90.452	Pongo_abelii
ENSRBIG00000042892	A1CF	92	74.138	ENSPCAG00000006463	A1CF	70	91.837	Procavia_capensis
ENSRBIG00000042892	A1CF	100	92.383	ENSPCOG00000024172	A1CF	100	89.465	Propithecus_coquereli
ENSRBIG00000042892	A1CF	100	72.727	ENSPNYG00000017944	a1cf	100	72.195	Pundamilia_nyererei
ENSRBIG00000042892	A1CF	100	79.492	ENSPNAG00000007704	a1cf	100	74.092	Pygocentrus_nattereri
ENSRBIG00000042892	A1CF	100	91.650	ENSRNOG00000033195	A1cf	100	86.265	Rattus_norvegicus
ENSRBIG00000042892	A1CF	100	98.800	ENSRROG00000041398	A1CF	100	93.266	Rhinopithecus_roxellana
ENSRBIG00000042892	A1CF	100	97.018	ENSSBOG00000021930	A1CF	100	97.018	Saimiri_boliviensis_boliviensis
ENSRBIG00000042892	A1CF	100	87.824	ENSSHAG00000005096	A1CF	100	83.866	Sarcophilus_harrisii
ENSRBIG00000042892	A1CF	100	78.278	ENSSFOG00015011774	a1cf	100	73.223	Scleropages_formosus
ENSRBIG00000042892	A1CF	100	72.401	ENSSMAG00000013271	a1cf	100	70.617	Scophthalmus_maximus
ENSRBIG00000042892	A1CF	100	73.359	ENSSDUG00000013930	a1cf	100	71.901	Seriola_dumerili
ENSRBIG00000042892	A1CF	100	67.641	ENSSLDG00000004290	a1cf	100	66.167	Seriola_lalandi_dorsalis
ENSRBIG00000042892	A1CF	100	82.505	ENSSARG00000005940	A1CF	96	77.113	Sorex_araneus
ENSRBIG00000042892	A1CF	100	86.078	ENSSPUG00000006797	A1CF	95	81.162	Sphenodon_punctatus
ENSRBIG00000042892	A1CF	100	91.977	ENSSSCG00000010431	A1CF	100	88.945	Sus_scrofa
ENSRBIG00000042892	A1CF	100	84.047	ENSTGUG00000005090	A1CF	100	81.167	Taeniopygia_guttata
ENSRBIG00000042892	A1CF	100	71.591	ENSTRUG00000001982	a1cf	100	69.106	Takifugu_rubripes
ENSRBIG00000042892	A1CF	100	72.264	ENSTNIG00000003580	a1cf	100	69.692	Tetraodon_nigroviridis
ENSRBIG00000042892	A1CF	100	88.072	ENSTTRG00000013190	A1CF	95	80.484	Tursiops_truncatus
ENSRBIG00000042892	A1CF	100	94.200	ENSUAMG00000020065	A1CF	100	88.047	Ursus_americanus
ENSRBIG00000042892	A1CF	100	92.126	ENSUMAG00000011162	A1CF	100	88.889	Ursus_maritimus
ENSRBIG00000042892	A1CF	100	89.744	ENSVPAG00000006130	A1CF	85	89.744	Vicugna_pacos
ENSRBIG00000042892	A1CF	100	93.600	ENSVVUG00000002504	A1CF	100	87.710	Vulpes_vulpes
ENSRBIG00000042892	A1CF	100	75.244	ENSXETG00000006611	a1cf	100	72.788	Xenopus_tropicalis
ENSRBIG00000042892	A1CF	100	75.048	ENSXCOG00000003302	a1cf	100	71.732	Xiphophorus_couchianus
ENSRBIG00000042892	A1CF	100	73.905	ENSXMAG00000016703	a1cf	100	72.876	Xiphophorus_maculatus