EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000042965 (Gene tree)
Gene ID: -
Gene Symbol: RBM12
Alias: HRIHFB2091|KIAA0765|SWAN
Full Name: copine 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 38365 bases
Position: chrMCGX01005543.1:795451-833815
Accession: 108538489
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000038978	RRM_1	PF00076.22	2e-30	1	3
ENSRBIP00000038978	RRM_1	PF00076.22	2e-30	2	3
ENSRBIP00000038978	RRM_1	PF00076.22	2e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000062995	RBM12-203	1782	-	ENSRBIP00000038974	593 (aa)	-	A0A2K6MT85
ENSRBIT00000062992	RBM12-202	2195	XM_017886595	ENSRBIP00000038971	542 (aa)	XP_017742084	A0A2K6MT82
ENSRBIT00000062999	RBM12-205	6651	XM_017886592	ENSRBIP00000038978	954 (aa)	XP_017742081	A0A2K6MT79
ENSRBIT00000062998	RBM12-204	1659	-	ENSRBIP00000038977	552 (aa)	-	A0A2K6MT93
ENSRBIT00000062989	RBM12-201	2007	XM_017886596	ENSRBIP00000038968	577 (aa)	XP_017742085	A0A2K6MT67

Gene Model

Click here to download ENSRBIG00000042965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000042965's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000042965	RBM12	54	72.414	ENSRBIG00000035046	RBM12B	57	72.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000042965	RBM12	98	99.571	ENSG00000244462	RBM12	100	99.571	Homo_sapiens
ENSRBIG00000042965	RBM12	98	96.030	ENSAMEG00000019189	RBM12	100	96.030	Ailuropoda_melanoleuca
ENSRBIG00000042965	RBM12	99	78.398	ENSACAG00000006330	RBM12	99	78.398	Anolis_carolinensis
ENSRBIG00000042965	RBM12	100	98.742	ENSANAG00000032596	RBM12	100	98.742	Aotus_nancymaae
ENSRBIG00000042965	RBM12	98	92.372	ENSBTAG00000044015	RBM12	100	91.641	Bos_taurus
ENSRBIG00000042965	RBM12	100	95.073	ENSCAFG00000008256	RBM12	100	94.340	Canis_familiaris
ENSRBIG00000042965	RBM12	98	94.635	ENSCAFG00020005650	RBM12	100	94.206	Canis_lupus_dingo
ENSRBIG00000042965	RBM12	98	94.528	ENSCHIG00000024592	RBM12	100	93.777	Capra_hircus
ENSRBIG00000042965	RBM12	100	94.654	ENSTSYG00000030563	RBM12	100	94.864	Carlito_syrichta
ENSRBIG00000042965	RBM12	82	84.260	ENSCAPG00000006176	RBM12	80	93.866	Cavia_aperea
ENSRBIG00000042965	RBM12	98	85.471	ENSCPOG00000035170	RBM12	100	93.866	Cavia_porcellus
ENSRBIG00000042965	RBM12	94	95.067	ENSCCAG00000036056	-	98	95.067	Cebus_capucinus
ENSRBIG00000042965	RBM12	90	89.418	ENSCCAG00000035899	-	100	76.502	Cebus_capucinus
ENSRBIG00000042965	RBM12	100	99.686	ENSCATG00000030934	RBM12	100	99.686	Cercocebus_atys
ENSRBIG00000042965	RBM12	98	93.455	ENSCLAG00000017230	RBM12	100	93.455	Chinchilla_lanigera
ENSRBIG00000042965	RBM12	100	99.790	ENSCANG00000030552	RBM12	100	99.790	Colobus_angolensis_palliatus
ENSRBIG00000042965	RBM12	98	80.900	ENSCGRG00001021144	Rbm12	100	86.030	Cricetulus_griseus_chok1gshd
ENSRBIG00000042965	RBM12	98	80.900	ENSCGRG00000012719	Rbm12	100	86.030	Cricetulus_griseus_crigri
ENSRBIG00000042965	RBM12	98	93.803	ENSDORG00000028509	-	100	93.162	Dipodomys_ordii
ENSRBIG00000042965	RBM12	73	86.591	ENSDORG00000000606	-	100	81.470	Dipodomys_ordii
ENSRBIG00000042965	RBM12	52	85.870	ENSEBUG00000016806	rbm12	89	65.649	Eptatretus_burgeri
ENSRBIG00000042965	RBM12	98	94.957	ENSECAG00000021997	RBM12	100	94.099	Equus_caballus
ENSRBIG00000042965	RBM12	98	93.991	ENSFDAG00000014663	RBM12	100	93.562	Fukomys_damarensis
ENSRBIG00000042965	RBM12	98	79.314	ENSGALG00000030253	RBM12	100	79.743	Gallus_gallus
ENSRBIG00000042965	RBM12	100	99.581	ENSGGOG00000028500	RBM12	100	99.581	Gorilla_gorilla
ENSRBIG00000042965	RBM12	98	94.313	ENSHGLG00000013208	RBM12	100	93.884	Heterocephalus_glaber_female
ENSRBIG00000042965	RBM12	88	97.492	ENSHGLG00100019158	RBM12	90	97.492	Heterocephalus_glaber_male
ENSRBIG00000042965	RBM12	98	90.231	ENSSTOG00000019739	RBM12	100	90.021	Ictidomys_tridecemlineatus
ENSRBIG00000042965	RBM12	98	93.777	ENSLAFG00000010341	RBM12	100	93.348	Loxodonta_africana
ENSRBIG00000042965	RBM12	100	99.686	ENSMFAG00000032583	RBM12	100	99.686	Macaca_fascicularis
ENSRBIG00000042965	RBM12	98	99.785	ENSMMUG00000020960	CPNE1	100	99.785	Macaca_mulatta
ENSRBIG00000042965	RBM12	100	99.790	ENSMNEG00000045365	RBM12	100	99.790	Macaca_nemestrina
ENSRBIG00000042965	RBM12	100	99.790	ENSMLEG00000032492	RBM12	100	99.790	Mandrillus_leucophaeus
ENSRBIG00000042965	RBM12	99	78.211	ENSMGAG00000001502	RBM12	100	79.587	Meleagris_gallopavo
ENSRBIG00000042965	RBM12	98	86.633	ENSMAUG00000012800	Rbm12	100	87.236	Mesocricetus_auratus
ENSRBIG00000042965	RBM12	100	93.501	ENSMICG00000032761	-	100	93.816	Microcebus_murinus
ENSRBIG00000042965	RBM12	98	85.300	ENSMICG00000029540	-	72	84.460	Microcebus_murinus
ENSRBIG00000042965	RBM12	98	80.020	ENSMOCG00000012950	Rbm12	100	92.351	Microtus_ochrogaster
ENSRBIG00000042965	RBM12	100	85.115	ENSMODG00000001591	RBM12	100	84.906	Monodelphis_domestica
ENSRBIG00000042965	RBM12	98	77.483	MGP_CAROLIEiJ_G0024551	Rbm12	98	92.867	Mus_caroli
ENSRBIG00000042965	RBM12	98	85.055	ENSMUSG00000089824	Rbm12	100	92.439	Mus_musculus
ENSRBIG00000042965	RBM12	98	78.075	MGP_PahariEiJ_G0025996	Rbm12	100	92.867	Mus_pahari
ENSRBIG00000042965	RBM12	71	93.971	MGP_SPRETEiJ_G0025473	Rbm12	99	92.582	Mus_spretus
ENSRBIG00000042965	RBM12	98	94.528	ENSMPUG00000017789	-	100	93.777	Mustela_putorius_furo
ENSRBIG00000042965	RBM12	100	94.235	ENSMLUG00000011217	RBM12	100	93.501	Myotis_lucifugus
ENSRBIG00000042965	RBM12	98	80.603	ENSNGAG00000015846	Rbm12	100	86.560	Nannospalax_galili
ENSRBIG00000042965	RBM12	100	99.266	ENSNLEG00000010268	RBM12	100	99.266	Nomascus_leucogenys
ENSRBIG00000042965	RBM12	98	84.764	ENSMEUG00000007621	RBM12	100	84.549	Notamacropus_eugenii
ENSRBIG00000042965	RBM12	98	92.038	ENSOPRG00000005687	RBM12	100	91.614	Ochotona_princeps
ENSRBIG00000042965	RBM12	84	89.157	ENSODEG00000013870	RBM12	100	86.137	Octodon_degus
ENSRBIG00000042965	RBM12	100	99.581	ENSPPAG00000040719	RBM12	100	99.581	Pan_paniscus
ENSRBIG00000042965	RBM12	100	99.581	ENSPTRG00000013446	RBM12	100	99.581	Pan_troglodytes
ENSRBIG00000042965	RBM12	100	99.581	ENSPTRG00000040708	-	100	99.581	Pan_troglodytes
ENSRBIG00000042965	RBM12	100	99.790	ENSPANG00000020003	CPNE1	100	99.790	Papio_anubis
ENSRBIG00000042965	RBM12	88	85.821	ENSPSIG00000007369	RBM12	92	93.103	Pelodiscus_sinensis
ENSRBIG00000042965	RBM12	98	79.860	ENSPEMG00000017769	Rbm12	100	85.119	Peromyscus_maniculatus_bairdii
ENSRBIG00000042965	RBM12	58	78.571	ENSPFOG00000023551	rbm12	93	78.873	Poecilia_formosa
ENSRBIG00000042965	RBM12	98	99.465	ENSPPYG00000010960	RBM12	100	99.465	Pongo_abelii
ENSRBIG00000042965	RBM12	98	92.382	ENSPCAG00000008653	RBM12	100	91.631	Procavia_capensis
ENSRBIG00000042965	RBM12	100	96.226	ENSPCOG00000023724	RBM12	100	96.226	Propithecus_coquereli
ENSRBIG00000042965	RBM12	81	94.416	ENSPVAG00000014937	RBM12	100	93.884	Pteropus_vampyrus
ENSRBIG00000042965	RBM12	73	92.582	ENSRNOG00000049913	LOC100910990	97	92.582	Rattus_norvegicus
ENSRBIG00000042965	RBM12	73	92.582	ENSRNOG00000019723	Rbm12	97	92.582	Rattus_norvegicus
ENSRBIG00000042965	RBM12	100	100.000	ENSRROG00000037485	RBM12	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000042965	RBM12	100	98.637	ENSSBOG00000027633	RBM12	100	98.637	Saimiri_boliviensis_boliviensis
ENSRBIG00000042965	RBM12	98	85.515	ENSSHAG00000018585	RBM12	100	85.300	Sarcophilus_harrisii
ENSRBIG00000042965	RBM12	98	94.771	ENSSSCG00000036156	RBM12	100	94.023	Sus_scrofa
ENSRBIG00000042965	RBM12	98	79.828	ENSTGUG00000003002	RBM12	100	79.292	Taeniopygia_guttata
ENSRBIG00000042965	RBM12	98	94.528	ENSTTRG00000017035	RBM12	100	93.777	Tursiops_truncatus
ENSRBIG00000042965	RBM12	98	94.866	ENSUAMG00000010430	RBM12	100	94.099	Ursus_americanus
ENSRBIG00000042965	RBM12	86	100.000	ENSVPAG00000003812	RBM12	87	100.000	Vicugna_pacos
ENSRBIG00000042965	RBM12	98	60.232	ENSXETG00000033541	RBM12	74	65.620	Xenopus_tropicalis