EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000043351 (Gene tree)
Gene ID: -
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 10940 bases
Position: chrMCGX01015946.1:377459-388398
Accession: 108518819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000039787	PRP38	PF03371.15	2.4e-57	1	1
ENSRBIP00000039790	PRP38	PF03371.15	1.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000063816	PRPF38B-202	660	-	ENSRBIP00000039788	219 (aa)	-	A0A2K6MVK2
ENSRBIT00000063815	PRPF38B-201	5168	XM_017857466	ENSRBIP00000039787	546 (aa)	XP_017712955	A0A2K6MVJ5
ENSRBIT00000063818	PRPF38B-203	573	-	ENSRBIP00000039790	190 (aa)	-	A0A2K6MVJ0

Gene Model

Click here to download ENSRBIG00000043351's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000043351's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000043351	PRPF38B	100	98.352	ENSCJAG00000002510	-	100	98.352	Callithrix_jacchus
ENSRBIG00000043351	PRPF38B	80	95.632	ENSTSYG00000029817	PRPF38B	97	95.487	Carlito_syrichta
ENSRBIG00000043351	PRPF38B	100	100.000	ENSCCAG00000033941	-	100	100.000	Cebus_capucinus
ENSRBIG00000043351	PRPF38B	100	99.451	ENSCSAG00000001531	PRPF38B	100	99.451	Chlorocebus_sabaeus
ENSRBIG00000043351	PRPF38B	100	100.000	ENSCANG00000027711	PRPF38B	100	100.000	Colobus_angolensis_palliatus
ENSRBIG00000043351	PRPF38B	100	98.535	ENSLAFG00000017112	PRPF38B	100	98.535	Loxodonta_africana
ENSRBIG00000043351	PRPF38B	100	100.000	ENSMMUG00000010155	PRPF38B	100	100.000	Macaca_mulatta
ENSRBIG00000043351	PRPF38B	100	100.000	ENSMNEG00000032003	-	100	100.000	Macaca_nemestrina
ENSRBIG00000043351	PRPF38B	100	100.000	ENSMICG00000032109	PRPF38B	100	100.000	Microcebus_murinus
ENSRBIG00000043351	PRPF38B	80	96.322	ENSODEG00000007646	PRPF38B	100	96.322	Octodon_degus
ENSRBIG00000043351	PRPF38B	83	98.238	ENSOCUG00000027424	PRPF38B	100	98.238	Oryctolagus_cuniculus
ENSRBIG00000043351	PRPF38B	100	98.901	ENSPPYG00000001092	PRPF38B	100	98.901	Pongo_abelii
ENSRBIG00000043351	PRPF38B	100	100.000	ENSPCOG00000016051	PRPF38B	100	100.000	Propithecus_coquereli
ENSRBIG00000043351	PRPF38B	100	100.000	ENSRROG00000029232	PRPF38B	100	100.000	Rhinopithecus_roxellana