EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000043392 (Gene tree)
Gene ID: -
Gene Symbol: SF3B4
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 9616 bases
Position: chrMCGX01004011.1:2611689-2621304
Accession: 108533284
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000039891	RRM_1	PF00076.22	4.6e-39	1	2
ENSRBIP00000039891	RRM_1	PF00076.22	4.6e-39	2	2
ENSRBIP00000039895	RRM_1	PF00076.22	4.6e-39	1	2
ENSRBIP00000039895	RRM_1	PF00076.22	4.6e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000063920	SF3B4-201	1977	XM_017877851	ENSRBIP00000039891	424 (aa)	XP_017733340	A0A2K6MVU3
ENSRBIT00000063924	SF3B4-202	1278	-	ENSRBIP00000039895	425 (aa)	-	A0A2K6MVU1

Gene Model

Click here to download ENSRBIG00000043392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000043392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000043392	SF3B4	70	40.476	ENSRBIG00000029759	-	60	40.476
ENSRBIG00000043392	SF3B4	60	39.597	ENSRBIG00000028738	-	68	38.251

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000043392	SF3B4	100	100.000	ENSG00000143368	SF3B4	100	100.000	Homo_sapiens
ENSRBIG00000043392	SF3B4	57	96.667	ENSAPOG00000017647	sf3b4	77	82.445	Acanthochromis_polyacanthus
ENSRBIG00000043392	SF3B4	100	99.764	ENSAMEG00000010073	SF3B4	100	99.764	Ailuropoda_melanoleuca
ENSRBIG00000043392	SF3B4	57	96.667	ENSAOCG00000019801	sf3b4	77	82.445	Amphiprion_ocellaris
ENSRBIG00000043392	SF3B4	57	96.667	ENSAPEG00000010365	sf3b4	77	82.445	Amphiprion_percula
ENSRBIG00000043392	SF3B4	57	96.250	ENSATEG00000012844	sf3b4	76	81.562	Anabas_testudineus
ENSRBIG00000043392	SF3B4	62	96.198	ENSACAG00000010019	SF3B4	90	89.817	Anolis_carolinensis
ENSRBIG00000043392	SF3B4	100	100.000	ENSANAG00000031025	SF3B4	100	100.000	Aotus_nancymaae
ENSRBIG00000043392	SF3B4	57	95.833	ENSACLG00000014260	sf3b4	76	81.505	Astatotilapia_calliptera
ENSRBIG00000043392	SF3B4	57	96.250	ENSAMXG00000008282	sf3b4	60	96.250	Astyanax_mexicanus
ENSRBIG00000043392	SF3B4	100	99.764	ENSBTAG00000012495	SF3B4	100	99.764	Bos_taurus
ENSRBIG00000043392	SF3B4	91	96.354	ENSBTAG00000012793	-	93	96.354	Bos_taurus
ENSRBIG00000043392	SF3B4	90	82.474	ENSCJAG00000042351	SF3B4	87	82.474	Callithrix_jacchus
ENSRBIG00000043392	SF3B4	100	99.292	ENSCAFG00000011617	SF3B4	100	99.292	Canis_familiaris
ENSRBIG00000043392	SF3B4	100	99.292	ENSCAFG00020019775	SF3B4	100	99.292	Canis_lupus_dingo
ENSRBIG00000043392	SF3B4	100	99.764	ENSCHIG00000025663	-	100	99.764	Capra_hircus
ENSRBIG00000043392	SF3B4	100	100.000	ENSTSYG00000009295	SF3B4	100	100.000	Carlito_syrichta
ENSRBIG00000043392	SF3B4	100	99.528	ENSCPOG00000008267	SF3B4	100	99.528	Cavia_porcellus
ENSRBIG00000043392	SF3B4	95	85.821	ENSCCAG00000019823	-	77	86.810	Cebus_capucinus
ENSRBIG00000043392	SF3B4	100	87.202	ENSCCAG00000021751	-	69	93.210	Cebus_capucinus
ENSRBIG00000043392	SF3B4	100	100.000	ENSCATG00000033114	SF3B4	100	100.000	Cercocebus_atys
ENSRBIG00000043392	SF3B4	100	99.528	ENSCLAG00000015851	SF3B4	100	99.528	Chinchilla_lanigera
ENSRBIG00000043392	SF3B4	100	100.000	ENSCSAG00000018129	SF3B4	100	100.000	Chlorocebus_sabaeus
ENSRBIG00000043392	SF3B4	99	85.849	ENSCPBG00000008041	SF3B4	91	90.625	Chrysemys_picta_bellii
ENSRBIG00000043392	SF3B4	50	90.654	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSRBIG00000043392	SF3B4	100	100.000	ENSCANG00000035579	SF3B4	100	100.000	Colobus_angolensis_palliatus
ENSRBIG00000043392	SF3B4	100	99.528	ENSCGRG00001003590	Sf3b4	100	99.528	Cricetulus_griseus_chok1gshd
ENSRBIG00000043392	SF3B4	100	99.528	ENSCGRG00000016914	Sf3b4	100	99.528	Cricetulus_griseus_crigri
ENSRBIG00000043392	SF3B4	57	96.250	ENSDARG00000018574	sf3b4	77	80.878	Danio_rerio
ENSRBIG00000043392	SF3B4	97	80.872	ENSDNOG00000037231	-	76	81.789	Dasypus_novemcinctus
ENSRBIG00000043392	SF3B4	98	96.875	ENSDNOG00000048908	-	99	96.875	Dasypus_novemcinctus
ENSRBIG00000043392	SF3B4	100	99.764	ENSDORG00000016366	Sf3b4	100	99.764	Dipodomys_ordii
ENSRBIG00000043392	SF3B4	76	92.593	ENSETEG00000008963	SF3B4	76	92.593	Echinops_telfairi
ENSRBIG00000043392	SF3B4	100	99.764	ENSEASG00005001477	SF3B4	100	99.764	Equus_asinus_asinus
ENSRBIG00000043392	SF3B4	100	99.764	ENSECAG00000024737	SF3B4	100	99.764	Equus_caballus
ENSRBIG00000043392	SF3B4	100	99.764	ENSFCAG00000010106	SF3B4	100	99.764	Felis_catus
ENSRBIG00000043392	SF3B4	100	99.528	ENSFDAG00000009286	SF3B4	100	99.528	Fukomys_damarensis
ENSRBIG00000043392	SF3B4	54	96.957	ENSGMOG00000002519	sf3b4	67	97.368	Gadus_morhua
ENSRBIG00000043392	SF3B4	99	89.125	ENSGALG00000013352	SF3B4	90	89.556	Gallus_gallus
ENSRBIG00000043392	SF3B4	63	92.453	ENSGAFG00000010181	sf3b4	58	97.807	Gambusia_affinis
ENSRBIG00000043392	SF3B4	99	85.613	ENSGAGG00000025055	SF3B4	79	90.365	Gopherus_agassizii
ENSRBIG00000043392	SF3B4	100	100.000	ENSGGOG00000004761	SF3B4	100	100.000	Gorilla_gorilla
ENSRBIG00000043392	SF3B4	100	73.821	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSRBIG00000043392	SF3B4	57	95.833	ENSHBUG00000002028	sf3b4	76	81.505	Haplochromis_burtoni
ENSRBIG00000043392	SF3B4	100	99.528	ENSHGLG00000012360	SF3B4	100	99.528	Heterocephalus_glaber_female
ENSRBIG00000043392	SF3B4	100	98.349	ENSHGLG00100008533	SF3B4	100	98.349	Heterocephalus_glaber_male
ENSRBIG00000043392	SF3B4	50	99.531	ENSHCOG00000003014	sf3b4	57	96.491	Hippocampus_comes
ENSRBIG00000043392	SF3B4	57	96.667	ENSIPUG00000012242	Sf3b4	77	81.250	Ictalurus_punctatus
ENSRBIG00000043392	SF3B4	93	71.501	ENSSTOG00000029627	-	74	67.913	Ictidomys_tridecemlineatus
ENSRBIG00000043392	SF3B4	100	99.764	ENSSTOG00000000684	-	100	99.764	Ictidomys_tridecemlineatus
ENSRBIG00000043392	SF3B4	76	84.052	ENSJJAG00000022500	Sf3b4	95	84.052	Jaculus_jaculus
ENSRBIG00000043392	SF3B4	56	96.203	ENSKMAG00000008154	sf3b4	58	98.246	Kryptolebias_marmoratus
ENSRBIG00000043392	SF3B4	55	97.425	ENSLBEG00000026818	sf3b4	57	98.246	Labrus_bergylta
ENSRBIG00000043392	SF3B4	57	95.473	ENSLACG00000004436	SF3B4	87	85.312	Latimeria_chalumnae
ENSRBIG00000043392	SF3B4	57	95.885	ENSLOCG00000009048	sf3b4	75	85.266	Lepisosteus_oculatus
ENSRBIG00000043392	SF3B4	100	99.294	ENSLAFG00000008531	SF3B4	100	99.294	Loxodonta_africana
ENSRBIG00000043392	SF3B4	92	71.066	ENSMFAG00000039067	-	57	80.930	Macaca_fascicularis
ENSRBIG00000043392	SF3B4	100	100.000	ENSMFAG00000042395	SF3B4	100	100.000	Macaca_fascicularis
ENSRBIG00000043392	SF3B4	100	100.000	ENSMMUG00000007256	SF3B4	100	100.000	Macaca_mulatta
ENSRBIG00000043392	SF3B4	100	100.000	ENSMNEG00000031839	SF3B4	100	100.000	Macaca_nemestrina
ENSRBIG00000043392	SF3B4	92	70.558	ENSMNEG00000031526	-	57	80.465	Macaca_nemestrina
ENSRBIG00000043392	SF3B4	100	100.000	ENSMLEG00000038667	SF3B4	100	100.000	Mandrillus_leucophaeus
ENSRBIG00000043392	SF3B4	57	97.083	ENSMAMG00000014692	sf3b4	77	81.562	Mastacembelus_armatus
ENSRBIG00000043392	SF3B4	57	95.833	ENSMZEG00005026741	sf3b4	76	81.505	Maylandia_zebra
ENSRBIG00000043392	SF3B4	99	87.707	ENSMGAG00000000653	SF3B4	91	88.083	Meleagris_gallopavo
ENSRBIG00000043392	SF3B4	100	99.528	ENSMAUG00000015266	Sf3b4	100	99.528	Mesocricetus_auratus
ENSRBIG00000043392	SF3B4	100	99.764	ENSMICG00000044961	SF3B4	100	99.764	Microcebus_murinus
ENSRBIG00000043392	SF3B4	98	94.458	ENSMOCG00000014155	-	100	94.458	Microtus_ochrogaster
ENSRBIG00000043392	SF3B4	100	99.528	ENSMOCG00000013658	-	100	99.528	Microtus_ochrogaster
ENSRBIG00000043392	SF3B4	54	97.826	ENSMMOG00000018032	sf3b4	58	97.807	Mola_mola
ENSRBIG00000043392	SF3B4	100	99.057	ENSMODG00000018767	SF3B4	100	99.057	Monodelphis_domestica
ENSRBIG00000043392	SF3B4	54	97.797	ENSMALG00000006174	sf3b4	57	97.368	Monopterus_albus
ENSRBIG00000043392	SF3B4	100	99.292	MGP_CAROLIEiJ_G0025365	Sf3b4	100	99.292	Mus_caroli
ENSRBIG00000043392	SF3B4	100	99.528	ENSMUSG00000068856	Sf3b4	100	99.528	Mus_musculus
ENSRBIG00000043392	SF3B4	100	99.528	MGP_PahariEiJ_G0026809	Sf3b4	100	99.528	Mus_pahari
ENSRBIG00000043392	SF3B4	100	99.528	MGP_SPRETEiJ_G0026309	Sf3b4	100	99.528	Mus_spretus
ENSRBIG00000043392	SF3B4	100	99.764	ENSMPUG00000005563	SF3B4	100	99.764	Mustela_putorius_furo
ENSRBIG00000043392	SF3B4	100	99.528	ENSMLUG00000010789	SF3B4	100	99.528	Myotis_lucifugus
ENSRBIG00000043392	SF3B4	100	99.292	ENSNGAG00000016337	Sf3b4	100	99.292	Nannospalax_galili
ENSRBIG00000043392	SF3B4	57	96.250	ENSNBRG00000013865	sf3b4	76	81.818	Neolamprologus_brichardi
ENSRBIG00000043392	SF3B4	100	76.887	ENSNLEG00000000537	-	82	85.185	Nomascus_leucogenys
ENSRBIG00000043392	SF3B4	100	70.327	ENSNLEG00000009693	-	100	70.327	Nomascus_leucogenys
ENSRBIG00000043392	SF3B4	81	100.000	ENSMEUG00000003272	SF3B4	82	100.000	Notamacropus_eugenii
ENSRBIG00000043392	SF3B4	99	97.150	ENSOPRG00000010808	SF3B4	99	97.150	Ochotona_princeps
ENSRBIG00000043392	SF3B4	75	86.751	ENSODEG00000003597	-	79	86.751	Octodon_degus
ENSRBIG00000043392	SF3B4	88	72.922	ENSODEG00000008916	-	84	71.827	Octodon_degus
ENSRBIG00000043392	SF3B4	56	95.359	ENSONIG00000002730	sf3b4	57	97.807	Oreochromis_niloticus
ENSRBIG00000043392	SF3B4	99	58.042	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSRBIG00000043392	SF3B4	100	99.764	ENSOCUG00000004614	SF3B4	100	99.764	Oryctolagus_cuniculus
ENSRBIG00000043392	SF3B4	55	96.983	ENSORLG00000003062	sf3b4	59	97.807	Oryzias_latipes
ENSRBIG00000043392	SF3B4	100	99.764	ENSOGAG00000006265	SF3B4	100	99.764	Otolemur_garnettii
ENSRBIG00000043392	SF3B4	100	99.764	ENSOARG00000020718	-	100	99.764	Ovis_aries
ENSRBIG00000043392	SF3B4	86	78.571	ENSOARG00000007368	-	77	79.375	Ovis_aries
ENSRBIG00000043392	SF3B4	100	100.000	ENSPPAG00000040904	SF3B4	100	100.000	Pan_paniscus
ENSRBIG00000043392	SF3B4	100	81.840	ENSPPAG00000030024	-	78	82.716	Pan_paniscus
ENSRBIG00000043392	SF3B4	100	99.764	ENSPPRG00000007384	SF3B4	100	99.764	Panthera_pardus
ENSRBIG00000043392	SF3B4	100	99.292	ENSPTIG00000014530	SF3B4	100	99.292	Panthera_tigris_altaica
ENSRBIG00000043392	SF3B4	100	100.000	ENSPTRG00000001243	SF3B4	100	100.000	Pan_troglodytes
ENSRBIG00000043392	SF3B4	100	79.009	ENSPTRG00000049727	-	59	90.254	Pan_troglodytes
ENSRBIG00000043392	SF3B4	100	100.000	ENSPANG00000005126	SF3B4	100	100.000	Papio_anubis
ENSRBIG00000043392	SF3B4	55	97.425	ENSPKIG00000020669	sf3b4	60	98.246	Paramormyrops_kingsleyae
ENSRBIG00000043392	SF3B4	100	99.528	ENSPEMG00000017568	Sf3b4	100	99.528	Peromyscus_maniculatus_bairdii
ENSRBIG00000043392	SF3B4	61	88.716	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSRBIG00000043392	SF3B4	100	99.057	ENSPCIG00000008765	SF3B4	100	99.057	Phascolarctos_cinereus
ENSRBIG00000043392	SF3B4	56	95.359	ENSPFOG00000005754	sf3b4	78	80.564	Poecilia_formosa
ENSRBIG00000043392	SF3B4	56	95.359	ENSPLAG00000001401	sf3b4	85	80.124	Poecilia_latipinna
ENSRBIG00000043392	SF3B4	56	95.359	ENSPREG00000011076	sf3b4	57	97.807	Poecilia_reticulata
ENSRBIG00000043392	SF3B4	63	96.635	ENSPCAG00000000392	SF3B4	63	96.635	Procavia_capensis
ENSRBIG00000043392	SF3B4	100	99.764	ENSPCOG00000015399	SF3B4	100	99.764	Propithecus_coquereli
ENSRBIG00000043392	SF3B4	100	99.764	ENSPVAG00000014171	SF3B4	100	99.764	Pteropus_vampyrus
ENSRBIG00000043392	SF3B4	57	95.833	ENSPNYG00000012700	sf3b4	76	81.505	Pundamilia_nyererei
ENSRBIG00000043392	SF3B4	57	96.667	ENSPNAG00000000686	sf3b4	79	80.938	Pygocentrus_nattereri
ENSRBIG00000043392	SF3B4	100	99.528	ENSRNOG00000021181	Sf3b4	100	99.528	Rattus_norvegicus
ENSRBIG00000043392	SF3B4	92	71.722	ENSRROG00000028213	-	91	67.914	Rhinopithecus_roxellana
ENSRBIG00000043392	SF3B4	100	100.000	ENSRROG00000029366	SF3B4	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000043392	SF3B4	100	99.764	ENSSBOG00000012310	-	100	99.764	Saimiri_boliviensis_boliviensis
ENSRBIG00000043392	SF3B4	100	72.877	ENSSBOG00000025174	-	73	79.567	Saimiri_boliviensis_boliviensis
ENSRBIG00000043392	SF3B4	100	96.462	ENSSHAG00000004043	SF3B4	100	98.688	Sarcophilus_harrisii
ENSRBIG00000043392	SF3B4	56	96.624	ENSSFOG00015008864	sf3b4	56	98.246	Scleropages_formosus
ENSRBIG00000043392	SF3B4	57	96.667	ENSSMAG00000006837	sf3b4	77	82.132	Scophthalmus_maximus
ENSRBIG00000043392	SF3B4	57	97.083	ENSSDUG00000012064	sf3b4	76	82.188	Seriola_dumerili
ENSRBIG00000043392	SF3B4	57	97.083	ENSSLDG00000014226	sf3b4	60	97.083	Seriola_lalandi_dorsalis
ENSRBIG00000043392	SF3B4	72	95.102	ENSSPUG00000001028	SF3B4	57	98.684	Sphenodon_punctatus
ENSRBIG00000043392	SF3B4	57	97.500	ENSSPAG00000019219	sf3b4	76	82.500	Stegastes_partitus
ENSRBIG00000043392	SF3B4	100	99.528	ENSSSCG00000006665	-	100	99.528	Sus_scrofa
ENSRBIG00000043392	SF3B4	85	64.365	ENSSSCG00000039440	-	79	65.741	Sus_scrofa
ENSRBIG00000043392	SF3B4	56	97.034	ENSTGUG00000004470	SF3B4	90	98.246	Taeniopygia_guttata
ENSRBIG00000043392	SF3B4	54	96.916	ENSTRUG00000004516	sf3b4	57	96.491	Takifugu_rubripes
ENSRBIG00000043392	SF3B4	54	96.957	ENSTNIG00000009156	sf3b4	58	97.368	Tetraodon_nigroviridis
ENSRBIG00000043392	SF3B4	100	99.764	ENSTTRG00000005217	SF3B4	100	99.764	Tursiops_truncatus
ENSRBIG00000043392	SF3B4	100	99.764	ENSUAMG00000022468	SF3B4	100	99.764	Ursus_americanus
ENSRBIG00000043392	SF3B4	100	98.821	ENSUMAG00000003802	SF3B4	100	98.821	Ursus_maritimus
ENSRBIG00000043392	SF3B4	97	99.757	ENSVPAG00000008152	SF3B4	100	99.757	Vicugna_pacos
ENSRBIG00000043392	SF3B4	99	92.584	ENSVVUG00000007732	-	100	92.584	Vulpes_vulpes
ENSRBIG00000043392	SF3B4	65	96.014	ENSVVUG00000022697	-	58	96.014	Vulpes_vulpes
ENSRBIG00000043392	SF3B4	54	97.391	ENSXCOG00000019895	sf3b4	58	97.807	Xiphophorus_couchianus
ENSRBIG00000043392	SF3B4	54	97.391	ENSXMAG00000003772	sf3b4	58	97.807	Xiphophorus_maculatus