EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000043393 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat domain 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 22602 bases
Position: chrMCGX01005405.1:1490992-1513593
Accession: 108538142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000039883	PPR	PF01535.20	5.7e-16	1	2
ENSRBIP00000039883	PPR	PF01535.20	5.7e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000063912	-	7322	XM_017886013	ENSRBIP00000039883	699 (aa)	XP_017741502	A0A2K6MVU9

Gene Model

Click here to download ENSRBIG00000043393's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000043393's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000043393	-	100	93.295	ENSG00000248919	ATP5MF-PTCD1	93	93.295	Homo_sapiens
ENSRBIG00000043393	-	100	93.295	ENSG00000106246	PTCD1	100	93.295	Homo_sapiens
ENSRBIG00000043393	-	81	45.979	ENSAPOG00000010679	ptcd1	87	45.804	Acanthochromis_polyacanthus
ENSRBIG00000043393	-	99	76.803	ENSAMEG00000006224	-	93	76.521	Ailuropoda_melanoleuca
ENSRBIG00000043393	-	85	49.340	ENSACIG00000017861	ptcd1	86	48.680	Amphilophus_citrinellus
ENSRBIG00000043393	-	88	45.425	ENSAOCG00000022617	ptcd1	91	45.425	Amphiprion_ocellaris
ENSRBIG00000043393	-	96	45.147	ENSAOCG00000020741	-	93	45.147	Amphiprion_ocellaris
ENSRBIG00000043393	-	96	45.228	ENSAPEG00000022632	ptcd1	93	45.228	Amphiprion_percula
ENSRBIG00000043393	-	86	49.180	ENSATEG00000007016	ptcd1	83	49.344	Anabas_testudineus
ENSRBIG00000043393	-	87	58.966	ENSAPLG00000006862	-	98	58.085	Anas_platyrhynchos
ENSRBIG00000043393	-	99	55.777	ENSACAG00000012871	-	92	55.777	Anolis_carolinensis
ENSRBIG00000043393	-	98	89.083	ENSANAG00000035790	-	100	88.501	Aotus_nancymaae
ENSRBIG00000043393	-	83	49.410	ENSACLG00000002824	ptcd1	80	48.567	Astatotilapia_calliptera
ENSRBIG00000043393	-	87	47.500	ENSAMXG00000037292	ptcd1	89	47.344	Astyanax_mexicanus
ENSRBIG00000043393	-	100	77.557	ENSBTAG00000020440	-	87	77.273	Bos_taurus
ENSRBIG00000043393	-	100	89.205	ENSCJAG00000015815	-	100	88.494	Callithrix_jacchus
ENSRBIG00000043393	-	100	75.637	ENSCAFG00000015055	-	93	75.354	Canis_familiaris
ENSRBIG00000043393	-	100	75.637	ENSCAFG00020014480	-	93	75.354	Canis_lupus_dingo
ENSRBIG00000043393	-	100	76.671	ENSCHIG00000027000	-	99	76.387	Capra_hircus
ENSRBIG00000043393	-	100	79.887	ENSTSYG00000029495	-	100	79.603	Carlito_syrichta
ENSRBIG00000043393	-	93	74.693	ENSCAPG00000014660	-	99	74.387	Cavia_aperea
ENSRBIG00000043393	-	99	74.249	ENSCPOG00000001780	-	99	73.963	Cavia_porcellus
ENSRBIG00000043393	-	100	87.234	ENSCCAG00000034025	-	100	86.809	Cebus_capucinus
ENSRBIG00000043393	-	100	95.863	ENSCATG00000040859	-	100	95.863	Cercocebus_atys
ENSRBIG00000043393	-	98	76.724	ENSCLAG00000006354	-	100	75.847	Chinchilla_lanigera
ENSRBIG00000043393	-	91	95.944	ENSCSAG00000017794	-	95	95.944	Chlorocebus_sabaeus
ENSRBIG00000043393	-	97	54.658	ENSCPBG00000020866	-	97	54.384	Chrysemys_picta_bellii
ENSRBIG00000043393	-	83	31.313	ENSCING00000007717	-	90	32.110	Ciona_intestinalis
ENSRBIG00000043393	-	100	98.283	ENSCANG00000023441	-	100	98.283	Colobus_angolensis_palliatus
ENSRBIG00000043393	-	99	73.745	ENSCGRG00001023686	Ptcd1	99	73.745	Cricetulus_griseus_chok1gshd
ENSRBIG00000043393	-	99	73.181	ENSCGRG00000015031	Ptcd1	99	73.181	Cricetulus_griseus_crigri
ENSRBIG00000043393	-	86	47.627	ENSCSEG00000002378	ptcd1	86	46.593	Cynoglossus_semilaevis
ENSRBIG00000043393	-	85	47.508	ENSCVAG00000003621	ptcd1	88	46.458	Cyprinodon_variegatus
ENSRBIG00000043393	-	84	47.811	ENSCVAG00000015826	ptcd1	81	47.138	Cyprinodon_variegatus
ENSRBIG00000043393	-	87	49.211	ENSDARG00000076176	ptcd1	89	49.211	Danio_rerio
ENSRBIG00000043393	-	99	73.580	ENSDNOG00000009957	-	99	73.580	Dasypus_novemcinctus
ENSRBIG00000043393	-	98	74.315	ENSDORG00000000740	Ptcd1	99	74.170	Dipodomys_ordii
ENSRBIG00000043393	-	90	41.314	ENSEBUG00000014515	ptcd1	99	42.007	Eptatretus_burgeri
ENSRBIG00000043393	-	100	78.622	ENSEASG00005002480	-	100	78.059	Equus_asinus_asinus
ENSRBIG00000043393	-	100	79.044	ENSECAG00000016617	-	100	78.481	Equus_caballus
ENSRBIG00000043393	-	84	47.923	ENSELUG00000016517	ptcd1	82	47.923	Esox_lucius
ENSRBIG00000043393	-	100	75.955	ENSFCAG00000015069	-	100	75.530	Felis_catus
ENSRBIG00000043393	-	93	57.549	ENSFALG00000013803	-	92	58.209	Ficedula_albicollis
ENSRBIG00000043393	-	100	75.818	ENSFDAG00000006393	-	100	75.818	Fukomys_damarensis
ENSRBIG00000043393	-	74	47.137	ENSFHEG00000012491	ptcd1	87	47.137	Fundulus_heteroclitus
ENSRBIG00000043393	-	87	47.117	ENSGMOG00000007639	ptcd1	96	47.117	Gadus_morhua
ENSRBIG00000043393	-	86	59.148	ENSGALG00000004711	-	92	57.333	Gallus_gallus
ENSRBIG00000043393	-	86	47.039	ENSGAFG00000013175	ptcd1	89	45.696	Gambusia_affinis
ENSRBIG00000043393	-	90	48.823	ENSGACG00000016607	ptcd1	94	48.509	Gasterosteus_aculeatus
ENSRBIG00000043393	-	92	54.532	ENSGAGG00000021832	-	99	54.532	Gopherus_agassizii
ENSRBIG00000043393	-	99	93.429	ENSGGOG00000015123	-	99	93.429	Gorilla_gorilla
ENSRBIG00000043393	-	83	49.241	ENSHBUG00000018275	ptcd1	80	48.398	Haplochromis_burtoni
ENSRBIG00000043393	-	100	76.278	ENSHGLG00000017621	-	100	76.278	Heterocephalus_glaber_female
ENSRBIG00000043393	-	100	76.278	ENSHGLG00100007218	-	100	76.278	Heterocephalus_glaber_male
ENSRBIG00000043393	-	83	48.370	ENSHCOG00000010784	ptcd1	82	48.542	Hippocampus_comes
ENSRBIG00000043393	-	100	74.121	ENSSTOG00000001682	-	100	73.840	Ictidomys_tridecemlineatus
ENSRBIG00000043393	-	100	73.542	ENSJJAG00000000319	Ptcd1	100	73.400	Jaculus_jaculus
ENSRBIG00000043393	-	85	47.098	ENSKMAG00000008708	ptcd1	82	47.098	Kryptolebias_marmoratus
ENSRBIG00000043393	-	87	48.214	ENSLBEG00000008061	ptcd1	83	47.903	Labrus_bergylta
ENSRBIG00000043393	-	87	58.909	ENSLACG00000011172	ptcd1	86	58.909	Latimeria_chalumnae
ENSRBIG00000043393	-	87	54.945	ENSLOCG00000004833	ptcd1	96	54.295	Lepisosteus_oculatus
ENSRBIG00000043393	-	99	70.213	ENSLAFG00000002588	-	99	70.780	Loxodonta_africana
ENSRBIG00000043393	-	100	95.435	ENSMFAG00000041324	-	100	95.435	Macaca_fascicularis
ENSRBIG00000043393	-	100	95.150	ENSMMUG00000030408	-	100	95.150	Macaca_mulatta
ENSRBIG00000043393	-	100	95.435	ENSMNEG00000043786	-	100	95.435	Macaca_nemestrina
ENSRBIG00000043393	-	100	73.039	ENSMLEG00000031179	-	100	75.036	Mandrillus_leucophaeus
ENSRBIG00000043393	-	84	50.000	ENSMAMG00000007623	ptcd1	80	49.666	Mastacembelus_armatus
ENSRBIG00000043393	-	83	49.410	ENSMZEG00005012722	ptcd1	80	48.567	Maylandia_zebra
ENSRBIG00000043393	-	98	56.320	ENSMGAG00000004211	-	92	56.461	Meleagris_gallopavo
ENSRBIG00000043393	-	99	78.187	ENSMICG00000017428	-	99	78.076	Microcebus_murinus
ENSRBIG00000043393	-	84	47.826	ENSMMOG00000020243	ptcd1	91	47.611	Mola_mola
ENSRBIG00000043393	-	98	58.356	ENSMODG00000001350	-	99	58.356	Monodelphis_domestica
ENSRBIG00000043393	-	85	49.082	ENSMALG00000018442	ptcd1	81	49.082	Monopterus_albus
ENSRBIG00000043393	-	99	74.674	MGP_CAROLIEiJ_G0028011	Ptcd1	99	74.674	Mus_caroli
ENSRBIG00000043393	-	99	74.096	ENSMUSG00000029624	Ptcd1	99	74.096	Mus_musculus
ENSRBIG00000043393	-	99	74.530	MGP_PahariEiJ_G0024580	Ptcd1	99	74.530	Mus_pahari
ENSRBIG00000043393	-	99	74.674	MGP_SPRETEiJ_G0029012	Ptcd1	99	74.674	Mus_spretus
ENSRBIG00000043393	-	100	74.648	ENSMPUG00000016518	-	100	74.507	Mustela_putorius_furo
ENSRBIG00000043393	-	99	79.090	ENSMLUG00000010994	-	94	78.592	Myotis_lucifugus
ENSRBIG00000043393	-	86	48.613	ENSNBRG00000010079	ptcd1	86	47.798	Neolamprologus_brichardi
ENSRBIG00000043393	-	100	94.364	ENSNLEG00000011060	-	100	94.364	Nomascus_leucogenys
ENSRBIG00000043393	-	97	62.482	ENSMEUG00000006930	-	99	62.482	Notamacropus_eugenii
ENSRBIG00000043393	-	89	75.644	ENSOPRG00000013647	-	89	75.644	Ochotona_princeps
ENSRBIG00000043393	-	83	48.398	ENSONIG00000003168	ptcd1	95	47.555	Oreochromis_niloticus
ENSRBIG00000043393	-	80	57.192	ENSOANG00000007728	-	80	54.173	Ornithorhynchus_anatinus
ENSRBIG00000043393	-	99	72.571	ENSOCUG00000010584	-	97	72.286	Oryctolagus_cuniculus
ENSRBIG00000043393	-	86	49.336	ENSORLG00000009275	ptcd1	86	49.169	Oryzias_latipes
ENSRBIG00000043393	-	86	47.947	ENSORLG00020000988	ptcd1	86	47.783	Oryzias_latipes_hni
ENSRBIG00000043393	-	86	48.671	ENSORLG00015010557	ptcd1	86	48.505	Oryzias_latipes_hsok
ENSRBIG00000043393	-	86	47.411	ENSOMEG00000020627	ptcd1	87	47.642	Oryzias_melastigma
ENSRBIG00000043393	-	99	74.821	ENSOGAG00000010877	-	100	74.392	Otolemur_garnettii
ENSRBIG00000043393	-	100	72.301	ENSOARG00000018676	-	100	72.017	Ovis_aries
ENSRBIG00000043393	-	100	92.867	ENSPPAG00000036024	-	100	93.010	Pan_paniscus
ENSRBIG00000043393	-	100	76.420	ENSPPRG00000003478	-	100	76.136	Panthera_pardus
ENSRBIG00000043393	-	100	92.867	ENSPTRG00000019452	-	100	93.010	Pan_troglodytes
ENSRBIG00000043393	-	100	95.435	ENSPANG00000016730	-	100	95.435	Papio_anubis
ENSRBIG00000043393	-	96	49.273	ENSPKIG00000014215	ptcd1	97	49.486	Paramormyrops_kingsleyae
ENSRBIG00000043393	-	85	58.264	ENSPSIG00000011184	-	100	59.098	Pelodiscus_sinensis
ENSRBIG00000043393	-	73	41.333	ENSPMAG00000009667	ptcd1	99	41.333	Petromyzon_marinus
ENSRBIG00000043393	-	98	58.767	ENSPCIG00000024778	-	98	58.848	Phascolarctos_cinereus
ENSRBIG00000043393	-	90	45.383	ENSPFOG00000004458	ptcd1	91	44.328	Poecilia_formosa
ENSRBIG00000043393	-	86	46.798	ENSPLAG00000011051	ptcd1	84	46.798	Poecilia_latipinna
ENSRBIG00000043393	-	90	45.540	ENSPMEG00000020547	ptcd1	91	44.478	Poecilia_mexicana
ENSRBIG00000043393	-	84	46.766	ENSPREG00000000059	ptcd1	84	46.766	Poecilia_reticulata
ENSRBIG00000043393	-	95	93.797	ENSPPYG00000017377	-	100	93.797	Pongo_abelii
ENSRBIG00000043393	-	81	71.789	ENSPCAG00000001852	-	88	71.789	Procavia_capensis
ENSRBIG00000043393	-	99	79.256	ENSPCOG00000018596	-	99	79.143	Propithecus_coquereli
ENSRBIG00000043393	-	67	88.000	ENSPVAG00000007529	-	72	88.000	Pteropus_vampyrus
ENSRBIG00000043393	-	83	49.073	ENSPNYG00000019993	ptcd1	80	48.229	Pundamilia_nyererei
ENSRBIG00000043393	-	86	50.080	ENSPNAG00000014931	ptcd1	90	49.451	Pygocentrus_nattereri
ENSRBIG00000043393	-	97	74.890	ENSRNOG00000000987	Ptcd1	98	75.110	Rattus_norvegicus
ENSRBIG00000043393	-	100	99.571	ENSRROG00000036420	-	100	99.571	Rhinopithecus_roxellana
ENSRBIG00000043393	-	100	88.620	ENSSBOG00000024114	-	100	88.051	Saimiri_boliviensis_boliviensis
ENSRBIG00000043393	-	98	57.400	ENSSHAG00000011376	-	98	62.519	Sarcophilus_harrisii
ENSRBIG00000043393	-	86	53.796	ENSSFOG00015007909	ptcd1	82	54.281	Scleropages_formosus
ENSRBIG00000043393	-	84	48.061	ENSSMAG00000000218	ptcd1	94	47.049	Scophthalmus_maximus
ENSRBIG00000043393	-	88	46.508	ENSSDUG00000015671	ptcd1	87	46.508	Seriola_dumerili
ENSRBIG00000043393	-	88	46.264	ENSSLDG00000014261	ptcd1	87	47.040	Seriola_lalandi_dorsalis
ENSRBIG00000043393	-	96	54.103	ENSSPUG00000003540	-	97	53.867	Sphenodon_punctatus
ENSRBIG00000043393	-	86	47.890	ENSSPAG00000011049	ptcd1	82	48.525	Stegastes_partitus
ENSRBIG00000043393	-	92	78.106	ENSSSCG00000007622	-	98	77.710	Sus_scrofa
ENSRBIG00000043393	-	87	61.211	ENSTGUG00000007563	-	99	61.211	Taeniopygia_guttata
ENSRBIG00000043393	-	91	46.562	ENSTRUG00000013471	ptcd1	86	46.429	Takifugu_rubripes
ENSRBIG00000043393	-	83	48.387	ENSTNIG00000008271	ptcd1	83	48.217	Tetraodon_nigroviridis
ENSRBIG00000043393	-	100	74.298	ENSTBEG00000011021	-	100	73.876	Tupaia_belangeri
ENSRBIG00000043393	-	99	75.718	ENSTTRG00000003006	-	99	75.575	Tursiops_truncatus
ENSRBIG00000043393	-	99	76.662	ENSUAMG00000008049	-	99	76.379	Ursus_americanus
ENSRBIG00000043393	-	99	75.391	ENSVVUG00000008836	-	100	75.107	Vulpes_vulpes
ENSRBIG00000043393	-	86	52.483	ENSXETG00000009891	ptcd1	89	51.696	Xenopus_tropicalis
ENSRBIG00000043393	-	86	47.030	ENSXMAG00000015540	ptcd1	88	46.154	Xiphophorus_maculatus