EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000043856 (Gene tree)
Gene ID: -
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 20216 bases
Position: chrMCGX01004167.1:2028286-2048501
Accession: 108534320
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000040946	zf-U11-48K	PF05253.12	4.7e-09	1	1
ENSRBIP00000040944	zf-U11-48K	PF05253.12	1.3e-08	1	1
ENSRBIP00000040945	zf-U11-48K	PF05253.12	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000064979	SNRNP48-201	4828	-	ENSRBIP00000040944	315 (aa)	-	A0A2K6MYT1
ENSRBIT00000064980	SNRNP48-202	2231	XM_017879617	ENSRBIP00000040945	315 (aa)	XP_017735106	A0A2K6MYT1
ENSRBIT00000064981	SNRNP48-203	1249	-	ENSRBIP00000040946	144 (aa)	-	A0A2K6MYU7

Gene Model

Click here to download ENSRBIG00000043856's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000043856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000043856	SNRNP48	98	98.387	ENSG00000168566	SNRNP48	93	97.826	Homo_sapiens
ENSRBIG00000043856	SNRNP48	87	47.703	ENSAPOG00000021430	snrnp48	83	47.751	Acanthochromis_polyacanthus
ENSRBIG00000043856	SNRNP48	97	89.457	ENSAMEG00000017349	SNRNP48	92	87.774	Ailuropoda_melanoleuca
ENSRBIG00000043856	SNRNP48	95	45.033	ENSACIG00000002032	snrnp48	82	46.290	Amphilophus_citrinellus
ENSRBIG00000043856	SNRNP48	87	47.703	ENSAOCG00000010562	snrnp48	83	47.405	Amphiprion_ocellaris
ENSRBIG00000043856	SNRNP48	87	48.043	ENSAPEG00000003231	snrnp48	83	47.735	Amphiprion_percula
ENSRBIG00000043856	SNRNP48	83	50.368	ENSATEG00000020210	snrnp48	81	50.000	Anabas_testudineus
ENSRBIG00000043856	SNRNP48	80	67.300	ENSACAG00000002811	SNRNP48	81	67.433	Anolis_carolinensis
ENSRBIG00000043856	SNRNP48	98	97.742	ENSANAG00000033538	SNRNP48	91	97.742	Aotus_nancymaae
ENSRBIG00000043856	SNRNP48	89	47.902	ENSAMXG00000015309	snrnp48	85	47.735	Astyanax_mexicanus
ENSRBIG00000043856	SNRNP48	98	86.174	ENSBTAG00000001123	SNRNP48	91	85.852	Bos_taurus
ENSRBIG00000043856	SNRNP48	98	97.419	ENSCJAG00000021330	SNRNP48	91	97.419	Callithrix_jacchus
ENSRBIG00000043856	SNRNP48	96	92.027	ENSCAFG00000009574	SNRNP48	76	91.558	Canis_familiaris
ENSRBIG00000043856	SNRNP48	96	92.384	ENSCAFG00020013203	SNRNP48	91	91.883	Canis_lupus_dingo
ENSRBIG00000043856	SNRNP48	98	87.781	ENSCHIG00000015216	SNRNP48	91	87.460	Capra_hircus
ENSRBIG00000043856	SNRNP48	93	93.151	ENSTSYG00000000698	SNRNP48	91	92.581	Carlito_syrichta
ENSRBIG00000043856	SNRNP48	87	89.130	ENSCAPG00000006768	SNRNP48	90	88.768	Cavia_aperea
ENSRBIG00000043856	SNRNP48	97	92.508	ENSCPOG00000007910	SNRNP48	93	91.083	Cavia_porcellus
ENSRBIG00000043856	SNRNP48	97	96.711	ENSCCAG00000035652	SNRNP48	91	96.129	Cebus_capucinus
ENSRBIG00000043856	SNRNP48	100	99.306	ENSCATG00000033947	SNRNP48	100	99.306	Cercocebus_atys
ENSRBIG00000043856	SNRNP48	97	90.461	ENSCLAG00000003765	SNRNP48	91	90.000	Chinchilla_lanigera
ENSRBIG00000043856	SNRNP48	98	99.032	ENSCSAG00000007409	SNRNP48	91	99.032	Chlorocebus_sabaeus
ENSRBIG00000043856	SNRNP48	84	64.539	ENSCPBG00000019146	SNRNP48	85	65.455	Chrysemys_picta_bellii
ENSRBIG00000043856	SNRNP48	92	30.272	ENSCING00000004121	-	61	34.975	Ciona_intestinalis
ENSRBIG00000043856	SNRNP48	98	99.032	ENSCANG00000030017	SNRNP48	91	99.032	Colobus_angolensis_palliatus
ENSRBIG00000043856	SNRNP48	98	88.065	ENSCGRG00001001076	-	92	88.065	Cricetulus_griseus_chok1gshd
ENSRBIG00000043856	SNRNP48	96	71.192	ENSCGRG00001008805	-	84	71.134	Cricetulus_griseus_chok1gshd
ENSRBIG00000043856	SNRNP48	98	88.065	ENSCGRG00000007781	Snrnp48	92	88.065	Cricetulus_griseus_crigri
ENSRBIG00000043856	SNRNP48	82	49.808	ENSCSEG00000000722	snrnp48	72	49.808	Cynoglossus_semilaevis
ENSRBIG00000043856	SNRNP48	95	46.580	ENSCVAG00000019829	snrnp48	73	47.222	Cyprinodon_variegatus
ENSRBIG00000043856	SNRNP48	88	46.853	ENSDARG00000039989	snrnp48	83	45.548	Danio_rerio
ENSRBIG00000043856	SNRNP48	97	91.803	ENSDNOG00000014978	SNRNP48	100	88.276	Dasypus_novemcinctus
ENSRBIG00000043856	SNRNP48	99	87.619	ENSDORG00000015140	Snrnp48	93	86.984	Dipodomys_ordii
ENSRBIG00000043856	SNRNP48	65	34.343	ENSEBUG00000016376	-	70	34.545	Eptatretus_burgeri
ENSRBIG00000043856	SNRNP48	97	93.092	ENSEASG00005012021	SNRNP48	91	92.581	Equus_asinus_asinus
ENSRBIG00000043856	SNRNP48	97	93.421	ENSECAG00000026937	SNRNP48	91	92.903	Equus_caballus
ENSRBIG00000043856	SNRNP48	97	69.481	ENSEEUG00000015437	SNRNP48	91	69.132	Erinaceus_europaeus
ENSRBIG00000043856	SNRNP48	94	47.020	ENSELUG00000009766	snrnp48	77	48.214	Esox_lucius
ENSRBIG00000043856	SNRNP48	97	93.750	ENSFCAG00000018853	SNRNP48	91	93.226	Felis_catus
ENSRBIG00000043856	SNRNP48	78	69.291	ENSFALG00000007797	SNRNP48	85	67.790	Ficedula_albicollis
ENSRBIG00000043856	SNRNP48	92	91.409	ENSFDAG00000009231	SNRNP48	91	90.554	Fukomys_damarensis
ENSRBIG00000043856	SNRNP48	63	56.931	ENSFHEG00000014647	snrnp48	82	52.941	Fundulus_heteroclitus
ENSRBIG00000043856	SNRNP48	78	47.581	ENSGMOG00000018599	-	86	45.583	Gadus_morhua
ENSRBIG00000043856	SNRNP48	83	67.647	ENSGALG00000013005	SNRNP48	90	67.910	Gallus_gallus
ENSRBIG00000043856	SNRNP48	88	48.592	ENSGAFG00000021639	snrnp48	80	48.084	Gambusia_affinis
ENSRBIG00000043856	SNRNP48	76	51.653	ENSGACG00000017756	-	84	48.432	Gasterosteus_aculeatus
ENSRBIG00000043856	SNRNP48	83	63.571	ENSGAGG00000000865	SNRNP48	89	64.364	Gopherus_agassizii
ENSRBIG00000043856	SNRNP48	98	98.387	ENSGGOG00000013220	SNRNP48	91	98.387	Gorilla_gorilla
ENSRBIG00000043856	SNRNP48	82	47.893	ENSHBUG00000017066	snrnp48	82	46.367	Haplochromis_burtoni
ENSRBIG00000043856	SNRNP48	97	91.447	ENSHGLG00000015241	SNRNP48	91	90.968	Heterocephalus_glaber_female
ENSRBIG00000043856	SNRNP48	97	91.447	ENSHGLG00100010027	SNRNP48	91	90.968	Heterocephalus_glaber_male
ENSRBIG00000043856	SNRNP48	77	47.967	ENSHCOG00000014066	snrnp48	81	45.833	Hippocampus_comes
ENSRBIG00000043856	SNRNP48	97	94.408	ENSSTOG00000014635	SNRNP48	91	93.871	Ictidomys_tridecemlineatus
ENSRBIG00000043856	SNRNP48	97	85.197	ENSJJAG00000011495	Snrnp48	91	84.839	Jaculus_jaculus
ENSRBIG00000043856	SNRNP48	89	46.975	ENSKMAG00000016514	snrnp48	80	46.975	Kryptolebias_marmoratus
ENSRBIG00000043856	SNRNP48	82	49.421	ENSLBEG00000026249	snrnp48	82	48.421	Labrus_bergylta
ENSRBIG00000043856	SNRNP48	95	56.352	ENSLACG00000003958	SNRNP48	92	54.232	Latimeria_chalumnae
ENSRBIG00000043856	SNRNP48	90	51.211	ENSLOCG00000004187	snrnp48	84	51.379	Lepisosteus_oculatus
ENSRBIG00000043856	SNRNP48	97	90.132	ENSLAFG00000011152	SNRNP48	91	89.677	Loxodonta_africana
ENSRBIG00000043856	SNRNP48	98	99.355	ENSMFAG00000045216	SNRNP48	95	99.270	Macaca_fascicularis
ENSRBIG00000043856	SNRNP48	98	99.355	ENSMMUG00000014785	SNRNP48	91	99.355	Macaca_mulatta
ENSRBIG00000043856	SNRNP48	98	99.032	ENSMNEG00000042269	SNRNP48	91	99.032	Macaca_nemestrina
ENSRBIG00000043856	SNRNP48	98	99.355	ENSMLEG00000034004	SNRNP48	95	99.270	Mandrillus_leucophaeus
ENSRBIG00000043856	SNRNP48	82	48.077	ENSMAMG00000018673	snrnp48	71	48.029	Mastacembelus_armatus
ENSRBIG00000043856	SNRNP48	82	67.897	ENSMGAG00000006037	SNRNP48	91	67.658	Meleagris_gallopavo
ENSRBIG00000043856	SNRNP48	97	89.251	ENSMAUG00000011944	Snrnp48	92	88.710	Mesocricetus_auratus
ENSRBIG00000043856	SNRNP48	97	92.105	ENSMICG00000012497	SNRNP48	91	91.613	Microcebus_murinus
ENSRBIG00000043856	SNRNP48	98	88.710	ENSMOCG00000015555	Snrnp48	92	88.710	Microtus_ochrogaster
ENSRBIG00000043856	SNRNP48	58	52.973	ENSMMOG00000003072	-	58	52.973	Mola_mola
ENSRBIG00000043856	SNRNP48	91	71.477	ENSMODG00000009996	SNRNP48	86	71.069	Monodelphis_domestica
ENSRBIG00000043856	SNRNP48	87	47.826	ENSMALG00000005725	snrnp48	79	48.188	Monopterus_albus
ENSRBIG00000043856	SNRNP48	98	87.419	MGP_CAROLIEiJ_G0018441	Snrnp48	92	87.419	Mus_caroli
ENSRBIG00000043856	SNRNP48	98	86.452	ENSMUSG00000021431	Snrnp48	92	86.452	Mus_musculus
ENSRBIG00000043856	SNRNP48	98	86.774	MGP_PahariEiJ_G0019509	Snrnp48	92	86.774	Mus_pahari
ENSRBIG00000043856	SNRNP48	98	85.806	MGP_SPRETEiJ_G0019321	Snrnp48	92	85.806	Mus_spretus
ENSRBIG00000043856	SNRNP48	98	87.419	ENSNGAG00000004849	Snrnp48	91	87.419	Nannospalax_galili
ENSRBIG00000043856	SNRNP48	80	48.047	ENSNBRG00000012127	snrnp48	82	46.021	Neolamprologus_brichardi
ENSRBIG00000043856	SNRNP48	98	98.710	ENSNLEG00000011667	SNRNP48	91	98.710	Nomascus_leucogenys
ENSRBIG00000043856	SNRNP48	97	78.176	ENSOPRG00000015471	SNRNP48	96	77.742	Ochotona_princeps
ENSRBIG00000043856	SNRNP48	94	77.027	ENSODEG00000005816	-	95	75.676	Octodon_degus
ENSRBIG00000043856	SNRNP48	80	48.047	ENSONIG00000001520	snrnp48	82	46.021	Oreochromis_niloticus
ENSRBIG00000043856	SNRNP48	91	58.904	ENSOANG00000019888	-	100	63.942	Ornithorhynchus_anatinus
ENSRBIG00000043856	SNRNP48	91	91.259	ENSOCUG00000005168	SNRNP48	100	90.789	Oryctolagus_cuniculus
ENSRBIG00000043856	SNRNP48	95	47.078	ENSORLG00000015654	snrnp48	82	47.586	Oryzias_latipes
ENSRBIG00000043856	SNRNP48	95	45.779	ENSORLG00020015976	snrnp48	70	46.897	Oryzias_latipes_hni
ENSRBIG00000043856	SNRNP48	95	46.753	ENSORLG00015022379	snrnp48	71	47.931	Oryzias_latipes_hsok
ENSRBIG00000043856	SNRNP48	89	47.569	ENSOMEG00000022007	snrnp48	82	48.264	Oryzias_melastigma
ENSRBIG00000043856	SNRNP48	95	92.667	ENSOGAG00000005275	SNRNP48	92	92.079	Otolemur_garnettii
ENSRBIG00000043856	SNRNP48	82	87.984	ENSOARG00000017319	SNRNP48	89	88.189	Ovis_aries
ENSRBIG00000043856	SNRNP48	98	98.710	ENSPPAG00000032873	SNRNP48	91	98.710	Pan_paniscus
ENSRBIG00000043856	SNRNP48	97	94.079	ENSPPRG00000004283	SNRNP48	91	93.548	Panthera_pardus
ENSRBIG00000043856	SNRNP48	80	94.444	ENSPTIG00000013502	SNRNP48	89	94.094	Panthera_tigris_altaica
ENSRBIG00000043856	SNRNP48	98	98.710	ENSPTRG00000017703	SNRNP48	91	98.710	Pan_troglodytes
ENSRBIG00000043856	SNRNP48	100	100.000	ENSPANG00000000771	SNRNP48	100	100.000	Papio_anubis
ENSRBIG00000043856	SNRNP48	89	48.980	ENSPKIG00000013703	snrnp48	59	49.474	Paramormyrops_kingsleyae
ENSRBIG00000043856	SNRNP48	86	62.153	ENSPSIG00000002213	SNRNP48	85	62.731	Pelodiscus_sinensis
ENSRBIG00000043856	SNRNP48	77	48.980	ENSPMGG00000008120	snrnp48	86	48.980	Periophthalmus_magnuspinnatus
ENSRBIG00000043856	SNRNP48	97	89.251	ENSPEMG00000008872	Snrnp48	92	88.710	Peromyscus_maniculatus_bairdii
ENSRBIG00000043856	SNRNP48	88	50.179	ENSPFOG00000003578	snrnp48	80	49.291	Poecilia_formosa
ENSRBIG00000043856	SNRNP48	79	47.368	ENSPLAG00000002290	snrnp48	77	51.965	Poecilia_latipinna
ENSRBIG00000043856	SNRNP48	88	49.462	ENSPMEG00000018033	snrnp48	80	48.582	Poecilia_mexicana
ENSRBIG00000043856	SNRNP48	77	52.439	ENSPREG00000018541	snrnp48	80	49.291	Poecilia_reticulata
ENSRBIG00000043856	SNRNP48	97	97.697	ENSPPYG00000016209	SNRNP48	91	97.097	Pongo_abelii
ENSRBIG00000043856	SNRNP48	98	75.177	ENSPCAG00000011991	SNRNP48	99	71.161	Procavia_capensis
ENSRBIG00000043856	SNRNP48	97	91.447	ENSPVAG00000002854	SNRNP48	91	90.968	Pteropus_vampyrus
ENSRBIG00000043856	SNRNP48	82	48.276	ENSPNYG00000015399	snrnp48	90	46.713	Pundamilia_nyererei
ENSRBIG00000043856	SNRNP48	97	88.599	ENSRNOG00000013756	Snrnp48	92	88.065	Rattus_norvegicus
ENSRBIG00000043856	SNRNP48	98	99.032	ENSRROG00000043229	SNRNP48	91	99.032	Rhinopithecus_roxellana
ENSRBIG00000043856	SNRNP48	98	97.742	ENSSBOG00000019486	SNRNP48	91	97.742	Saimiri_boliviensis_boliviensis
ENSRBIG00000043856	SNRNP48	90	72.148	ENSSHAG00000014483	SNRNP48	91	72.013	Sarcophilus_harrisii
ENSRBIG00000043856	SNRNP48	78	52.174	ENSSFOG00015006610	snrnp48	69	50.000	Scleropages_formosus
ENSRBIG00000043856	SNRNP48	94	46.801	ENSSDUG00000014953	snrnp48	82	47.735	Seriola_dumerili
ENSRBIG00000043856	SNRNP48	89	48.136	ENSSLDG00000005989	snrnp48	84	47.119	Seriola_lalandi_dorsalis
ENSRBIG00000043856	SNRNP48	82	66.296	ENSSPUG00000006257	SNRNP48	77	66.171	Sphenodon_punctatus
ENSRBIG00000043856	SNRNP48	84	48.905	ENSSPAG00000006454	snrnp48	80	48.571	Stegastes_partitus
ENSRBIG00000043856	SNRNP48	80	68.077	ENSTGUG00000007575	SNRNP48	82	68.093	Taeniopygia_guttata
ENSRBIG00000043856	SNRNP48	79	49.206	ENSTRUG00000007031	snrnp48	82	48.227	Takifugu_rubripes
ENSRBIG00000043856	SNRNP48	77	47.131	ENSTNIG00000012977	-	72	47.131	Tetraodon_nigroviridis
ENSRBIG00000043856	SNRNP48	98	83.688	ENSTBEG00000015620	SNRNP48	78	89.811	Tupaia_belangeri
ENSRBIG00000043856	SNRNP48	98	90.323	ENSTTRG00000016715	SNRNP48	91	90.323	Tursiops_truncatus
ENSRBIG00000043856	SNRNP48	97	93.092	ENSUAMG00000003690	SNRNP48	91	91.290	Ursus_americanus
ENSRBIG00000043856	SNRNP48	81	89.412	ENSVPAG00000003557	SNRNP48	87	89.243	Vicugna_pacos
ENSRBIG00000043856	SNRNP48	96	92.053	ENSVVUG00000004996	SNRNP48	91	91.558	Vulpes_vulpes
ENSRBIG00000043856	SNRNP48	97	51.899	ENSXETG00000020447	snrnp48	83	51.689	Xenopus_tropicalis
ENSRBIG00000043856	SNRNP48	79	45.614	ENSXCOG00000004478	snrnp48	69	51.489	Xiphophorus_couchianus
ENSRBIG00000043856	SNRNP48	88	50.179	ENSXMAG00000013595	snrnp48	76	50.179	Xiphophorus_maculatus