EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000044325 (Gene tree)
Gene ID: -
Gene Symbol: CHD1
Alias: -
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 74929 bases
Position: chrMCGX01000802.1:200902-275830
Accession: 108541263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000042053	ResIII	PF04851.15	3.1e-07	1	1
ENSRBIP00000042060	ResIII	PF04851.15	3.1e-07	1	1
ENSRBIP00000042058	ResIII	PF04851.15	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000066102	CHD1-204	5022	-	ENSRBIP00000042060	1673 (aa)	-	A0A2K6N1Z6
ENSRBIT00000066095	CHD1-201	4998	XM_017890732	ENSRBIP00000042053	1665 (aa)	XP_017746221	A0A2K6N210
ENSRBIT00000066100	CHD1-203	5028	-	ENSRBIP00000042058	1675 (aa)	-	A0A2K6N214
ENSRBIT00000066099	CHD1-202	5061	-	ENSRBIP00000042057	1686 (aa)	-	A0A2K6N254

Gene Model

Click here to download ENSRBIG00000044325's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000044325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000044325	CHD1	93	65.251	ENSRBIG00000036875	-	88	69.052

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000044325	CHD1	100	96.439	ENSG00000153922	CHD1	100	96.264	Homo_sapiens
ENSRBIG00000044325	CHD1	66	83.967	ENSAPOG00000005764	chd1	94	84.335	Acanthochromis_polyacanthus
ENSRBIG00000044325	CHD1	89	75.294	ENSAOCG00000023105	chd1	92	77.005	Amphiprion_ocellaris
ENSRBIG00000044325	CHD1	89	76.486	ENSAPEG00000013544	chd1	92	78.223	Amphiprion_percula
ENSRBIG00000044325	CHD1	90	75.787	ENSATEG00000010676	chd1	92	75.979	Anabas_testudineus
ENSRBIG00000044325	CHD1	71	83.036	ENSAMXG00000010843	chd1	89	84.201	Astyanax_mexicanus
ENSRBIG00000044325	CHD1	100	96.848	ENSCATG00000032035	CHD1	100	96.807	Cercocebus_atys
ENSRBIG00000044325	CHD1	100	96.906	ENSCSAG00000015339	CHD1	100	96.673	Chlorocebus_sabaeus
ENSRBIG00000044325	CHD1	56	88.781	ENSCPBG00000015831	CHD1	99	84.310	Chrysemys_picta_bellii
ENSRBIG00000044325	CHD1	100	95.047	ENSCANG00000036916	CHD1	100	95.047	Colobus_angolensis_palliatus
ENSRBIG00000044325	CHD1	100	93.291	ENSCGRG00001023943	Chd1	100	93.232	Cricetulus_griseus_chok1gshd
ENSRBIG00000044325	CHD1	100	93.291	ENSCGRG00000008652	Chd1	100	93.232	Cricetulus_griseus_crigri
ENSRBIG00000044325	CHD1	89	74.052	ENSCSEG00000009553	chd1	92	75.739	Cynoglossus_semilaevis
ENSRBIG00000044325	CHD1	90	95.777	ENSEASG00005016110	CHD1	96	98.003	Equus_asinus_asinus
ENSRBIG00000044325	CHD1	89	76.197	ENSELUG00000017677	chd1	93	76.147	Esox_lucius
ENSRBIG00000044325	CHD1	70	82.553	ENSFHEG00000021164	chd1	86	82.483	Fundulus_heteroclitus
ENSRBIG00000044325	CHD1	96	77.554	ENSGMOG00000001537	chd1	91	77.112	Gadus_morhua
ENSRBIG00000044325	CHD1	92	88.138	ENSGALG00000031327	-	96	88.329	Gallus_gallus
ENSRBIG00000044325	CHD1	82	93.617	ENSGAFG00000019880	chd1	88	93.617	Gambusia_affinis
ENSRBIG00000044325	CHD1	100	92.966	ENSGGOG00000011463	CHD1	100	92.966	Gorilla_gorilla
ENSRBIG00000044325	CHD1	88	77.475	ENSHCOG00000014222	chd1	91	78.024	Hippocampus_comes
ENSRBIG00000044325	CHD1	87	80.188	ENSIPUG00000001369	chd1	95	78.190	Ictalurus_punctatus
ENSRBIG00000044325	CHD1	65	95.070	ENSLAFG00000023183	CHD1	99	95.145	Loxodonta_africana
ENSRBIG00000044325	CHD1	100	96.848	ENSMFAG00000031226	CHD1	100	96.816	Macaca_fascicularis
ENSRBIG00000044325	CHD1	82	99.491	ENSMMUG00000014090	CHD1	96	99.491	Macaca_mulatta
ENSRBIG00000044325	CHD1	100	96.848	ENSMNEG00000045073	CHD1	100	96.816	Macaca_nemestrina
ENSRBIG00000044325	CHD1	100	92.689	ENSMLEG00000041096	CHD1	100	93.071	Mandrillus_leucophaeus
ENSRBIG00000044325	CHD1	69	83.666	ENSMZEG00005010957	chd1	91	81.177	Maylandia_zebra
ENSRBIG00000044325	CHD1	100	94.187	ENSMOCG00000019121	Chd1	100	94.247	Microtus_ochrogaster
ENSRBIG00000044325	CHD1	79	78.631	ENSMALG00000013317	chd1	93	78.212	Monopterus_albus
ENSRBIG00000044325	CHD1	100	92.070	MGP_CAROLIEiJ_G0021099	Chd1	99	96.858	Mus_caroli
ENSRBIG00000044325	CHD1	100	92.303	ENSMUSG00000023852	Chd1	99	97.043	Mus_musculus
ENSRBIG00000044325	CHD1	100	92.595	MGP_PahariEiJ_G0023414	Chd1	99	97.045	Mus_pahari
ENSRBIG00000044325	CHD1	87	78.426	ENSNBRG00000006860	chd1	93	77.609	Neolamprologus_brichardi
ENSRBIG00000044325	CHD1	100	93.706	ENSNLEG00000014493	CHD1	100	93.706	Nomascus_leucogenys
ENSRBIG00000044325	CHD1	100	90.487	ENSOANG00000004891	CHD1	100	91.172	Ornithorhynchus_anatinus
ENSRBIG00000044325	CHD1	60	77.712	ENSORLG00015016725	chd1	93	77.313	Oryzias_latipes_hsok
ENSRBIG00000044325	CHD1	100	95.029	ENSPPAG00000043367	CHD1	100	95.029	Pan_paniscus
ENSRBIG00000044325	CHD1	100	96.264	ENSPTRG00000017103	CHD1	100	96.242	Pan_troglodytes
ENSRBIG00000044325	CHD1	100	96.848	ENSPANG00000006387	CHD1	100	96.816	Papio_anubis
ENSRBIG00000044325	CHD1	91	75.911	ENSPKIG00000024719	chd1	94	77.449	Paramormyrops_kingsleyae
ENSRBIG00000044325	CHD1	72	82.373	ENSPMGG00000005785	chd1	90	82.456	Periophthalmus_magnuspinnatus
ENSRBIG00000044325	CHD1	100	93.407	ENSPEMG00000015939	Chd1	100	93.349	Peromyscus_maniculatus_bairdii
ENSRBIG00000044325	CHD1	50	77.672	ENSPLAG00000006473	-	85	78.055	Poecilia_latipinna
ENSRBIG00000044325	CHD1	97	73.630	ENSPREG00000004209	chd1	97	73.855	Poecilia_reticulata
ENSRBIG00000044325	CHD1	82	96.501	ENSRNOG00000014434	Chd1	96	96.501	Rattus_norvegicus
ENSRBIG00000044325	CHD1	100	97.255	ENSRROG00000001726	CHD1	100	97.289	Rhinopithecus_roxellana
ENSRBIG00000044325	CHD1	68	85.198	ENSSFOG00015007161	chd1	88	83.319	Scleropages_formosus
ENSRBIG00000044325	CHD1	79	78.507	ENSSDUG00000018314	chd1	92	78.389	Seriola_dumerili
ENSRBIG00000044325	CHD1	53	83.941	ENSSLDG00000017244	chd1	84	86.019	Seriola_lalandi_dorsalis
ENSRBIG00000044325	CHD1	78	80.598	ENSSPAG00000007024	chd1	93	78.824	Stegastes_partitus
ENSRBIG00000044325	CHD1	86	95.127	ENSSSCG00000014177	CHD1	100	94.936	Sus_scrofa
ENSRBIG00000044325	CHD1	90	73.793	ENSTRUG00000010282	chd1	96	71.784	Takifugu_rubripes
ENSRBIG00000044325	CHD1	73	77.514	ENSTNIG00000007101	chd1	95	78.077	Tetraodon_nigroviridis
ENSRBIG00000044325	CHD1	97	71.973	ENSXCOG00000017184	chd1	97	71.734	Xiphophorus_couchianus
ENSRBIG00000044325	CHD1	78	78.490	ENSXMAG00000014538	chd1	95	78.867	Xiphophorus_maculatus