EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000044466 (Gene tree)
Gene ID: -
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 26043 bases
Position: chrMCGX01004114.1:2226979-2253021
Accession: 108533894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000042357	HVSL	PF09749.9	5.9e-61	1	1
ENSRBIP00000042358	HVSL	PF09749.9	1.5e-51	1	2
ENSRBIP00000042358	HVSL	PF09749.9	1.5e-51	2	2
ENSRBIP00000042359	HVSL	PF09749.9	6e-29	1	1
ENSRBIP00000042360	HVSL	PF09749.9	8.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000066403	USB1-204	543	-	ENSRBIP00000042360	180 (aa)	-	A0A2K6N2W4
ENSRBIT00000066402	USB1-203	477	-	ENSRBIP00000042359	158 (aa)	-	A0A2K6N2U8
ENSRBIT00000066401	USB1-202	744	XM_017878916	ENSRBIP00000042358	247 (aa)	XP_017734405	A0A2K6N2W5
ENSRBIT00000066400	USB1-201	2679	XM_017878917	ENSRBIP00000042357	214 (aa)	XP_017734406	A0A2K6N312

Gene Model

Click here to download ENSRBIG00000044466's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000044466's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000044466	USB1	100	97.196	ENSG00000103005	USB1	100	97.196	Homo_sapiens
ENSRBIG00000044466	USB1	100	53.271	ENSAPOG00000011942	usb1	79	53.110	Acanthochromis_polyacanthus
ENSRBIG00000044466	USB1	100	88.785	ENSAMEG00000017205	USB1	100	78.067	Ailuropoda_melanoleuca
ENSRBIG00000044466	USB1	100	55.140	ENSACIG00000012234	usb1	79	55.140	Amphilophus_citrinellus
ENSRBIG00000044466	USB1	100	55.140	ENSAOCG00000014831	usb1	76	55.140	Amphiprion_ocellaris
ENSRBIG00000044466	USB1	100	55.607	ENSAPEG00000000296	usb1	76	55.607	Amphiprion_percula
ENSRBIG00000044466	USB1	100	54.673	ENSATEG00000009348	usb1	82	49.351	Anabas_testudineus
ENSRBIG00000044466	USB1	95	73.039	ENSAPLG00000002756	USB1	100	65.044	Anas_platyrhynchos
ENSRBIG00000044466	USB1	98	65.550	ENSACAG00000015481	USB1	100	58.952	Anolis_carolinensis
ENSRBIG00000044466	USB1	100	96.729	ENSANAG00000035640	USB1	100	95.142	Aotus_nancymaae
ENSRBIG00000044466	USB1	100	53.738	ENSACLG00000020586	usb1	80	50.000	Astatotilapia_calliptera
ENSRBIG00000044466	USB1	99	52.113	ENSAMXG00000040146	usb1	71	52.113	Astyanax_mexicanus
ENSRBIG00000044466	USB1	100	86.916	ENSBTAG00000015758	USB1	100	78.491	Bos_taurus
ENSRBIG00000044466	USB1	100	97.664	ENSCJAG00000011733	USB1	100	93.671	Callithrix_jacchus
ENSRBIG00000044466	USB1	99	89.202	ENSCAFG00000008556	USB1	73	75.000	Canis_familiaris
ENSRBIG00000044466	USB1	99	89.202	ENSCAFG00020009263	USB1	99	73.455	Canis_lupus_dingo
ENSRBIG00000044466	USB1	100	86.449	ENSCHIG00000024290	USB1	100	79.070	Capra_hircus
ENSRBIG00000044466	USB1	100	93.458	ENSTSYG00000006997	USB1	100	90.283	Carlito_syrichta
ENSRBIG00000044466	USB1	100	71.495	ENSCAPG00000009057	USB1	100	73.364	Cavia_aperea
ENSRBIG00000044466	USB1	100	87.850	ENSCPOG00000014325	USB1	100	76.866	Cavia_porcellus
ENSRBIG00000044466	USB1	100	97.196	ENSCCAG00000022132	USB1	100	95.547	Cebus_capucinus
ENSRBIG00000044466	USB1	100	99.533	ENSCATG00000032174	USB1	100	98.381	Cercocebus_atys
ENSRBIG00000044466	USB1	82	88.068	ENSCLAG00000007363	USB1	100	88.068	Chinchilla_lanigera
ENSRBIG00000044466	USB1	100	99.065	ENSCSAG00000004783	USB1	100	92.075	Chlorocebus_sabaeus
ENSRBIG00000044466	USB1	100	68.692	ENSCPBG00000026943	USB1	83	62.771	Chrysemys_picta_bellii
ENSRBIG00000044466	USB1	98	30.531	ENSCING00000011490	-	82	30.531	Ciona_intestinalis
ENSRBIG00000044466	USB1	93	30.769	ENSCSAVG00000000894	-	74	30.918	Ciona_savignyi
ENSRBIG00000044466	USB1	100	99.065	ENSCANG00000037135	USB1	100	98.381	Colobus_angolensis_palliatus
ENSRBIG00000044466	USB1	100	90.187	ENSCGRG00001011243	USB1	100	77.985	Cricetulus_griseus_chok1gshd
ENSRBIG00000044466	USB1	100	90.187	ENSCGRG00000013252	USB1	100	77.985	Cricetulus_griseus_crigri
ENSRBIG00000044466	USB1	100	52.336	ENSCSEG00000013881	usb1	84	45.923	Cynoglossus_semilaevis
ENSRBIG00000044466	USB1	95	52.451	ENSCVAG00000009252	usb1	97	47.807	Cyprinodon_variegatus
ENSRBIG00000044466	USB1	100	50.467	ENSDARG00000003841	usb1	78	50.467	Danio_rerio
ENSRBIG00000044466	USB1	100	87.383	ENSDORG00000001888	Usb1	100	76.604	Dipodomys_ordii
ENSRBIG00000044466	USB1	95	40.000	FBgn0037713	CG16790	78	40.000	Drosophila_melanogaster
ENSRBIG00000044466	USB1	100	71.495	ENSETEG00000019682	USB1	100	64.794	Echinops_telfairi
ENSRBIG00000044466	USB1	99	50.704	ENSEBUG00000005889	usb1	74	50.704	Eptatretus_burgeri
ENSRBIG00000044466	USB1	100	90.187	ENSEASG00005005484	USB1	100	80.755	Equus_asinus_asinus
ENSRBIG00000044466	USB1	100	91.121	ENSECAG00000019493	USB1	91	81.132	Equus_caballus
ENSRBIG00000044466	USB1	82	79.545	ENSEEUG00000000154	USB1	66	79.545	Erinaceus_europaeus
ENSRBIG00000044466	USB1	100	49.302	ENSELUG00000010974	usb1	91	45.382	Esox_lucius
ENSRBIG00000044466	USB1	100	91.121	ENSFCAG00000002693	USB1	100	86.345	Felis_catus
ENSRBIG00000044466	USB1	99	69.340	ENSFALG00000006876	USB1	99	58.303	Ficedula_albicollis
ENSRBIG00000044466	USB1	100	89.720	ENSFDAG00000010052	USB1	100	79.026	Fukomys_damarensis
ENSRBIG00000044466	USB1	92	44.785	ENSFHEG00000012334	usb1	73	54.098	Fundulus_heteroclitus
ENSRBIG00000044466	USB1	100	51.402	ENSGMOG00000004228	usb1	99	47.982	Gadus_morhua
ENSRBIG00000044466	USB1	95	70.588	ENSGALG00000035604	USB1	100	58.647	Gallus_gallus
ENSRBIG00000044466	USB1	100	53.488	ENSGAFG00000021890	usb1	82	49.561	Gambusia_affinis
ENSRBIG00000044466	USB1	100	53.271	ENSGACG00000003257	usb1	77	53.271	Gasterosteus_aculeatus
ENSRBIG00000044466	USB1	100	67.290	ENSGAGG00000022572	USB1	100	57.509	Gopherus_agassizii
ENSRBIG00000044466	USB1	100	98.131	ENSGGOG00000017147	USB1	100	97.166	Gorilla_gorilla
ENSRBIG00000044466	USB1	100	54.206	ENSHBUG00000009823	usb1	81	50.661	Haplochromis_burtoni
ENSRBIG00000044466	USB1	100	89.252	ENSHGLG00000016078	USB1	98	79.401	Heterocephalus_glaber_female
ENSRBIG00000044466	USB1	100	89.252	ENSHGLG00100005562	USB1	98	79.401	Heterocephalus_glaber_male
ENSRBIG00000044466	USB1	99	55.399	ENSHCOG00000015633	usb1	82	55.399	Hippocampus_comes
ENSRBIG00000044466	USB1	100	54.206	ENSIPUG00000008601	usb1	74	54.206	Ictalurus_punctatus
ENSRBIG00000044466	USB1	100	89.720	ENSSTOG00000007548	USB1	100	76.557	Ictidomys_tridecemlineatus
ENSRBIG00000044466	USB1	100	90.654	ENSJJAG00000021859	Usb1	100	79.401	Jaculus_jaculus
ENSRBIG00000044466	USB1	100	54.206	ENSKMAG00000007200	usb1	80	49.339	Kryptolebias_marmoratus
ENSRBIG00000044466	USB1	88	52.910	ENSLBEG00000008452	usb1	61	53.889	Labrus_bergylta
ENSRBIG00000044466	USB1	93	57.843	ENSLACG00000000105	USB1	82	49.796	Latimeria_chalumnae
ENSRBIG00000044466	USB1	100	56.542	ENSLOCG00000000465	usb1	82	52.609	Lepisosteus_oculatus
ENSRBIG00000044466	USB1	100	66.822	ENSLAFG00000002267	USB1	100	57.818	Loxodonta_africana
ENSRBIG00000044466	USB1	100	99.533	ENSMFAG00000003926	USB1	100	98.785	Macaca_fascicularis
ENSRBIG00000044466	USB1	100	99.533	ENSMMUG00000022669	USB1	100	98.785	Macaca_mulatta
ENSRBIG00000044466	USB1	100	99.065	ENSMNEG00000042487	USB1	100	98.734	Macaca_nemestrina
ENSRBIG00000044466	USB1	100	99.533	ENSMLEG00000028756	USB1	100	98.785	Mandrillus_leucophaeus
ENSRBIG00000044466	USB1	100	54.673	ENSMAMG00000015092	usb1	83	48.927	Mastacembelus_armatus
ENSRBIG00000044466	USB1	100	53.738	ENSMZEG00005010008	usb1	80	50.000	Maylandia_zebra
ENSRBIG00000044466	USB1	100	89.252	ENSMAUG00000007832	Usb1	100	77.528	Mesocricetus_auratus
ENSRBIG00000044466	USB1	100	91.589	ENSMICG00000004900	USB1	100	91.139	Microcebus_murinus
ENSRBIG00000044466	USB1	100	88.318	ENSMOCG00000022647	Usb1	100	76.404	Microtus_ochrogaster
ENSRBIG00000044466	USB1	100	54.206	ENSMMOG00000000490	usb1	88	49.561	Mola_mola
ENSRBIG00000044466	USB1	100	74.299	ENSMODG00000014067	USB1	100	61.567	Monodelphis_domestica
ENSRBIG00000044466	USB1	100	53.738	ENSMALG00000005930	usb1	80	50.220	Monopterus_albus
ENSRBIG00000044466	USB1	100	85.981	MGP_CAROLIEiJ_G0031421	Usb1	100	84.071	Mus_caroli
ENSRBIG00000044466	USB1	100	86.449	ENSMUSG00000031792	Usb1	100	84.956	Mus_musculus
ENSRBIG00000044466	USB1	100	86.449	MGP_PahariEiJ_G0023019	Usb1	100	85.470	Mus_pahari
ENSRBIG00000044466	USB1	100	85.514	MGP_SPRETEiJ_G0032540	Usb1	100	73.408	Mus_spretus
ENSRBIG00000044466	USB1	100	85.981	ENSMPUG00000004684	USB1	96	75.836	Mustela_putorius_furo
ENSRBIG00000044466	USB1	100	89.720	ENSMLUG00000007400	USB1	100	83.117	Myotis_lucifugus
ENSRBIG00000044466	USB1	100	91.121	ENSNGAG00000009703	Usb1	100	77.695	Nannospalax_galili
ENSRBIG00000044466	USB1	100	52.804	ENSNBRG00000008747	usb1	99	53.960	Neolamprologus_brichardi
ENSRBIG00000044466	USB1	100	94.304	ENSNLEG00000003340	USB1	100	97.414	Nomascus_leucogenys
ENSRBIG00000044466	USB1	94	59.615	ENSMEUG00000003328	-	100	58.974	Notamacropus_eugenii
ENSRBIG00000044466	USB1	70	87.879	ENSOPRG00000011803	USB1	66	87.879	Ochotona_princeps
ENSRBIG00000044466	USB1	100	86.916	ENSODEG00000016214	USB1	100	75.655	Octodon_degus
ENSRBIG00000044466	USB1	100	53.738	ENSONIG00000011063	usb1	81	50.220	Oreochromis_niloticus
ENSRBIG00000044466	USB1	97	75.000	ENSOANG00000012118	USB1	94	68.889	Ornithorhynchus_anatinus
ENSRBIG00000044466	USB1	100	51.869	ENSORLG00000012479	usb1	83	47.807	Oryzias_latipes
ENSRBIG00000044466	USB1	100	51.869	ENSORLG00020018671	usb1	99	45.185	Oryzias_latipes_hni
ENSRBIG00000044466	USB1	100	52.336	ENSORLG00015009679	usb1	84	48.246	Oryzias_latipes_hsok
ENSRBIG00000044466	USB1	100	51.402	ENSOMEG00000012930	usb1	82	47.368	Oryzias_melastigma
ENSRBIG00000044466	USB1	100	87.854	ENSOGAG00000003273	USB1	100	87.854	Otolemur_garnettii
ENSRBIG00000044466	USB1	100	87.383	ENSOARG00000001107	USB1	93	78.189	Ovis_aries
ENSRBIG00000044466	USB1	100	97.664	ENSPPAG00000042137	USB1	100	96.761	Pan_paniscus
ENSRBIG00000044466	USB1	100	91.121	ENSPPRG00000024797	USB1	100	86.747	Panthera_pardus
ENSRBIG00000044466	USB1	100	90.654	ENSPTIG00000007506	USB1	100	86.345	Panthera_tigris_altaica
ENSRBIG00000044466	USB1	100	98.131	ENSPTRG00000008172	USB1	100	98.131	Pan_troglodytes
ENSRBIG00000044466	USB1	100	99.533	ENSPANG00000025138	USB1	100	98.785	Papio_anubis
ENSRBIG00000044466	USB1	99	55.399	ENSPKIG00000015109	usb1	82	48.971	Paramormyrops_kingsleyae
ENSRBIG00000044466	USB1	100	52.778	ENSPSIG00000004305	USB1	100	53.812	Pelodiscus_sinensis
ENSRBIG00000044466	USB1	99	51.643	ENSPMGG00000017725	usb1	85	48.879	Periophthalmus_magnuspinnatus
ENSRBIG00000044466	USB1	100	88.318	ENSPEMG00000016183	Usb1	100	73.897	Peromyscus_maniculatus_bairdii
ENSRBIG00000044466	USB1	100	50.463	ENSPMAG00000000462	usb1	100	44.726	Petromyzon_marinus
ENSRBIG00000044466	USB1	98	53.589	ENSPFOG00000011130	usb1	82	49.123	Poecilia_formosa
ENSRBIG00000044466	USB1	100	53.023	ENSPLAG00000009820	usb1	82	49.123	Poecilia_latipinna
ENSRBIG00000044466	USB1	98	53.589	ENSPMEG00000006402	usb1	82	49.123	Poecilia_mexicana
ENSRBIG00000044466	USB1	92	45.062	ENSPREG00000001047	usb1	79	50.000	Poecilia_reticulata
ENSRBIG00000044466	USB1	96	91.447	ENSPPYG00000007401	USB1	100	86.508	Pongo_abelii
ENSRBIG00000044466	USB1	100	93.671	ENSPCOG00000022612	USB1	100	93.671	Propithecus_coquereli
ENSRBIG00000044466	USB1	100	85.514	ENSPVAG00000004613	USB1	100	75.472	Pteropus_vampyrus
ENSRBIG00000044466	USB1	100	54.206	ENSPNYG00000022262	usb1	79	54.545	Pundamilia_nyererei
ENSRBIG00000044466	USB1	100	51.869	ENSPNAG00000011736	usb1	73	51.869	Pygocentrus_nattereri
ENSRBIG00000044466	USB1	100	86.916	ENSRNOG00000013216	Usb1	100	76.404	Rattus_norvegicus
ENSRBIG00000044466	USB1	100	100.000	ENSRROG00000029211	USB1	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000044466	USB1	100	97.664	ENSSBOG00000029362	USB1	100	94.737	Saimiri_boliviensis_boliviensis
ENSRBIG00000044466	USB1	100	73.364	ENSSHAG00000006993	USB1	96	63.934	Sarcophilus_harrisii
ENSRBIG00000044466	USB1	99	57.746	ENSSFOG00015023663	usb1	76	50.826	Scleropages_formosus
ENSRBIG00000044466	USB1	100	52.632	ENSSMAG00000015834	usb1	83	47.368	Scophthalmus_maximus
ENSRBIG00000044466	USB1	100	56.075	ENSSDUG00000002949	usb1	87	49.618	Seriola_dumerili
ENSRBIG00000044466	USB1	100	56.075	ENSSLDG00000014174	usb1	76	56.075	Seriola_lalandi_dorsalis
ENSRBIG00000044466	USB1	100	69.626	ENSSPUG00000006741	USB1	100	69.626	Sphenodon_punctatus
ENSRBIG00000044466	USB1	100	52.804	ENSSPAG00000007484	usb1	80	49.339	Stegastes_partitus
ENSRBIG00000044466	USB1	100	90.187	ENSSSCG00000002807	USB1	100	78.439	Sus_scrofa
ENSRBIG00000044466	USB1	99	70.283	ENSTGUG00000004792	USB1	94	59.671	Taeniopygia_guttata
ENSRBIG00000044466	USB1	100	51.869	ENSTRUG00000021069	usb1	92	46.371	Takifugu_rubripes
ENSRBIG00000044466	USB1	100	49.065	ENSTNIG00000000626	usb1	83	46.429	Tetraodon_nigroviridis
ENSRBIG00000044466	USB1	100	60.280	ENSTBEG00000001507	USB1	100	55.172	Tupaia_belangeri
ENSRBIG00000044466	USB1	100	88.318	ENSUAMG00000016823	USB1	100	78.067	Ursus_americanus
ENSRBIG00000044466	USB1	100	88.318	ENSUMAG00000021369	USB1	100	88.318	Ursus_maritimus
ENSRBIG00000044466	USB1	96	51.656	ENSVPAG00000009834	-	59	88.333	Vicugna_pacos
ENSRBIG00000044466	USB1	99	89.671	ENSVVUG00000023700	USB1	93	79.253	Vulpes_vulpes
ENSRBIG00000044466	USB1	95	57.143	ENSXETG00000013795	usb1	94	49.153	Xenopus_tropicalis
ENSRBIG00000044466	USB1	100	53.488	ENSXMAG00000024687	usb1	67	49.561	Xiphophorus_maculatus