EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSRBIG00000044478 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Plus strand
Length: 213890 bases
Position: chrMCGX01003169.1:115872-329761
Accession: 108531131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000042415	Fox-1_C	PF12414.8	1e-42	1	1
ENSRBIP00000042414	Fox-1_C	PF12414.8	1.6e-42	1	1
ENSRBIP00000042418	Fox-1_C	PF12414.8	2.2e-40	1	1
ENSRBIP00000042413	Fox-1_C	PF12414.8	2.7e-40	1	1
ENSRBIP00000042417	Fox-1_C	PF12414.8	3.1e-40	1	1
ENSRBIP00000042416	Fox-1_C	PF12414.8	5.5e-40	1	1
ENSRBIP00000042412	Fox-1_C	PF12414.8	3.1e-38	1	1
ENSRBIP00000042412	RRM_1	PF00076.22	3.7e-18	1	1
ENSRBIP00000042415	RRM_1	PF00076.22	4.1e-18	1	1
ENSRBIP00000042413	RRM_1	PF00076.22	4.4e-18	1	1
ENSRBIP00000042414	RRM_1	PF00076.22	4.7e-18	1	1
ENSRBIP00000042417	RRM_1	PF00076.22	5.2e-18	1	1
ENSRBIP00000042416	RRM_1	PF00076.22	6.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000066458	RBFOX1-204	2714	XM_017874424	ENSRBIP00000042415	361 (aa)	XP_017729913	A0A2K6N318
ENSRBIT00000066459	RBFOX1-205	1041	-	ENSRBIP00000042416	346 (aa)	-	A0A2K6N2Y8
ENSRBIT00000066460	RBFOX1-206	2222	XM_017874411	ENSRBIP00000042417	414 (aa)	XP_017729900	A0A2K6N382
ENSRBIT00000066461	RBFOX1-207	1008	-	ENSRBIP00000042418	335 (aa)	-	A0A2K6N328
ENSRBIT00000066455	RBFOX1-201	4641	XM_017874422	ENSRBIP00000042412	377 (aa)	XP_017729911	A0A2K6N377
ENSRBIT00000066456	RBFOX1-202	4638	XM_017874423	ENSRBIP00000042413	376 (aa)	XP_017729912	A0A2K6N323
ENSRBIT00000066457	RBFOX1-203	3755	XM_017874414	ENSRBIP00000042414	388 (aa)	XP_017729903	A0A2K6N2Z8

Gene Model

Click here to download ENSRBIG00000044478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000044478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRBIG00000044478	RBFOX1	100	63.524	ENSRBIG00000033696	RBFOX2	98	63.210
ENSRBIG00000044478	RBFOX1	89	76.308	ENSRBIG00000040449	RBFOX3	90	76.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000044478	RBFOX1	100	100.000	ENSG00000078328	RBFOX1	100	100.000	Homo_sapiens
ENSRBIG00000044478	RBFOX1	100	81.266	ENSAPOG00000003197	rbfox1	98	81.794	Acanthochromis_polyacanthus
ENSRBIG00000044478	RBFOX1	60	97.685	ENSAMEG00000008605	RBFOX1	89	96.396	Ailuropoda_melanoleuca
ENSRBIG00000044478	RBFOX1	66	71.375	ENSACIG00000005478	rbfox1	68	71.375	Amphilophus_citrinellus
ENSRBIG00000044478	RBFOX1	80	70.347	ENSAOCG00000008283	rbfox1	96	77.778	Amphiprion_ocellaris
ENSRBIG00000044478	RBFOX1	97	71.390	ENSAPEG00000010636	rbfox1	100	71.274	Amphiprion_percula
ENSRBIG00000044478	RBFOX1	80	68.966	ENSATEG00000007513	rbfox1	96	76.157	Anabas_testudineus
ENSRBIG00000044478	RBFOX1	100	94.845	ENSAPLG00000013263	RBFOX1	97	94.845	Anas_platyrhynchos
ENSRBIG00000044478	RBFOX1	100	87.980	ENSACAG00000004013	RBFOX1	98	87.980	Anolis_carolinensis
ENSRBIG00000044478	RBFOX1	100	99.758	ENSANAG00000029527	RBFOX1	96	99.446	Aotus_nancymaae
ENSRBIG00000044478	RBFOX1	60	89.815	ENSAMXG00000002431	rbfox1	65	88.000	Astyanax_mexicanus
ENSRBIG00000044478	RBFOX1	100	98.939	ENSBTAG00000007210	RBFOX1	100	98.939	Bos_taurus
ENSRBIG00000044478	RBFOX1	100	99.517	ENSCJAG00000017351	RBFOX1	93	99.517	Callithrix_jacchus
ENSRBIG00000044478	RBFOX1	100	97.172	ENSCAFG00000019082	RBFOX1	93	99.728	Canis_familiaris
ENSRBIG00000044478	RBFOX1	97	85.014	ENSCAFG00020024881	RBFOX1	92	85.559	Canis_lupus_dingo
ENSRBIG00000044478	RBFOX1	100	98.939	ENSCHIG00000023549	RBFOX1	100	98.939	Capra_hircus
ENSRBIG00000044478	RBFOX1	100	99.169	ENSTSYG00000005334	RBFOX1	100	99.169	Carlito_syrichta
ENSRBIG00000044478	RBFOX1	100	98.196	ENSCAPG00000017669	RBFOX1	100	98.196	Cavia_aperea
ENSRBIG00000044478	RBFOX1	100	98.196	ENSCPOG00000011314	RBFOX1	99	98.196	Cavia_porcellus
ENSRBIG00000044478	RBFOX1	100	99.758	ENSCCAG00000023031	RBFOX1	97	99.758	Cebus_capucinus
ENSRBIG00000044478	RBFOX1	100	100.000	ENSCATG00000033816	RBFOX1	96	100.000	Cercocebus_atys
ENSRBIG00000044478	RBFOX1	100	98.711	ENSCLAG00000012761	RBFOX1	100	98.138	Chinchilla_lanigera
ENSRBIG00000044478	RBFOX1	100	100.000	ENSCSAG00000008739	RBFOX1	100	100.000	Chlorocebus_sabaeus
ENSRBIG00000044478	RBFOX1	100	73.779	ENSCHOG00000012843	RBFOX1	93	73.779	Choloepus_hoffmanni
ENSRBIG00000044478	RBFOX1	100	95.568	ENSCPBG00000026626	RBFOX1	100	94.681	Chrysemys_picta_bellii
ENSRBIG00000044478	RBFOX1	100	100.000	ENSCANG00000033125	RBFOX1	96	100.000	Colobus_angolensis_palliatus
ENSRBIG00000044478	RBFOX1	100	98.196	ENSCGRG00001013729	Rbfox1	98	98.196	Cricetulus_griseus_chok1gshd
ENSRBIG00000044478	RBFOX1	100	98.196	ENSCGRG00000003272	Rbfox1	98	98.196	Cricetulus_griseus_crigri
ENSRBIG00000044478	RBFOX1	97	76.216	ENSCSEG00000008840	rbfox1	100	76.216	Cynoglossus_semilaevis
ENSRBIG00000044478	RBFOX1	100	88.398	ENSDARG00000014746	rbfox1	100	87.317	Danio_rerio
ENSRBIG00000044478	RBFOX1	100	98.454	ENSDNOG00000043612	RBFOX1	93	98.454	Dasypus_novemcinctus
ENSRBIG00000044478	RBFOX1	100	95.908	ENSDORG00000010024	Rbfox1	97	95.908	Dipodomys_ordii
ENSRBIG00000044478	RBFOX1	100	75.835	ENSETEG00000003771	RBFOX1	93	75.835	Echinops_telfairi
ENSRBIG00000044478	RBFOX1	100	99.227	ENSEASG00005011599	RBFOX1	97	97.172	Equus_asinus_asinus
ENSRBIG00000044478	RBFOX1	100	99.202	ENSECAG00000012667	RBFOX1	100	99.202	Equus_caballus
ENSRBIG00000044478	RBFOX1	100	54.545	ENSELUG00000013096	rbfox1	97	54.270	Esox_lucius
ENSRBIG00000044478	RBFOX1	100	99.468	ENSFCAG00000025322	RBFOX1	100	99.468	Felis_catus
ENSRBIG00000044478	RBFOX1	86	95.046	ENSFALG00000004027	RBFOX1	97	95.046	Ficedula_albicollis
ENSRBIG00000044478	RBFOX1	100	98.711	ENSFDAG00000007388	RBFOX1	98	98.711	Fukomys_damarensis
ENSRBIG00000044478	RBFOX1	98	94.837	ENSGALG00000034325	RBFOX1	97	95.082	Gallus_gallus
ENSRBIG00000044478	RBFOX1	100	93.899	ENSGAGG00000023681	RBFOX1	100	94.960	Gopherus_agassizii
ENSRBIG00000044478	RBFOX1	100	100.000	ENSGGOG00000016871	-	96	100.000	Gorilla_gorilla
ENSRBIG00000044478	RBFOX1	100	98.454	ENSHGLG00000016944	RBFOX1	100	97.872	Heterocephalus_glaber_female
ENSRBIG00000044478	RBFOX1	100	98.454	ENSHGLG00100003272	RBFOX1	100	97.872	Heterocephalus_glaber_male
ENSRBIG00000044478	RBFOX1	86	76.562	ENSHCOG00000016419	rbfox1	91	76.562	Hippocampus_comes
ENSRBIG00000044478	RBFOX1	97	90.857	ENSIPUG00000015215	rbfox1	100	90.857	Ictalurus_punctatus
ENSRBIG00000044478	RBFOX1	100	97.938	ENSSTOG00000000322	RBFOX1	100	97.340	Ictidomys_tridecemlineatus
ENSRBIG00000044478	RBFOX1	100	94.845	ENSJJAG00000002575	Rbfox1	98	94.845	Jaculus_jaculus
ENSRBIG00000044478	RBFOX1	97	78.474	ENSLBEG00000014659	rbfox1	97	78.474	Labrus_bergylta
ENSRBIG00000044478	RBFOX1	100	87.468	ENSLOCG00000006675	rbfox1	98	87.468	Lepisosteus_oculatus
ENSRBIG00000044478	RBFOX1	79	99.026	ENSLAFG00000011480	RBFOX1	100	99.026	Loxodonta_africana
ENSRBIG00000044478	RBFOX1	100	99.758	ENSMFAG00000036447	RBFOX1	96	99.723	Macaca_fascicularis
ENSRBIG00000044478	RBFOX1	100	99.758	ENSMMUG00000003458	RBFOX1	99	99.729	Macaca_mulatta
ENSRBIG00000044478	RBFOX1	100	99.758	ENSMNEG00000032034	RBFOX1	97	99.758	Macaca_nemestrina
ENSRBIG00000044478	RBFOX1	100	100.000	ENSMLEG00000015382	RBFOX1	96	100.000	Mandrillus_leucophaeus
ENSRBIG00000044478	RBFOX1	97	80.548	ENSMAMG00000003142	rbfox1	100	81.096	Mastacembelus_armatus
ENSRBIG00000044478	RBFOX1	77	89.347	ENSMGAG00000008606	RBFOX1	98	89.161	Meleagris_gallopavo
ENSRBIG00000044478	RBFOX1	99	58.333	ENSMAUG00000020570	Rbfox1	96	57.292	Mesocricetus_auratus
ENSRBIG00000044478	RBFOX1	100	99.517	ENSMICG00000034286	RBFOX1	100	99.469	Microcebus_murinus
ENSRBIG00000044478	RBFOX1	100	98.196	ENSMOCG00000020932	Rbfox1	100	98.177	Microtus_ochrogaster
ENSRBIG00000044478	RBFOX1	88	77.044	ENSMMOG00000009716	rbfox1	86	77.885	Mola_mola
ENSRBIG00000044478	RBFOX1	94	97.740	ENSMODG00000005826	RBFOX1	100	97.740	Monodelphis_domestica
ENSRBIG00000044478	RBFOX1	100	82.038	ENSMALG00000003337	rbfox1	98	82.038	Monopterus_albus
ENSRBIG00000044478	RBFOX1	100	98.454	MGP_CAROLIEiJ_G0020427	Rbfox1	98	98.454	Mus_caroli
ENSRBIG00000044478	RBFOX1	100	98.196	ENSMUSG00000008658	Rbfox1	98	98.196	Mus_musculus
ENSRBIG00000044478	RBFOX1	100	98.454	MGP_PahariEiJ_G0016135	Rbfox1	98	98.454	Mus_pahari
ENSRBIG00000044478	RBFOX1	100	97.938	MGP_SPRETEiJ_G0021321	Rbfox1	98	97.938	Mus_spretus
ENSRBIG00000044478	RBFOX1	97	99.180	ENSMPUG00000014822	RBFOX1	93	99.180	Mustela_putorius_furo
ENSRBIG00000044478	RBFOX1	79	99.674	ENSMLUG00000015896	RBFOX1	100	99.674	Myotis_lucifugus
ENSRBIG00000044478	RBFOX1	100	98.711	ENSNGAG00000023276	Rbfox1	100	98.711	Nannospalax_galili
ENSRBIG00000044478	RBFOX1	99	62.907	ENSNBRG00000011084	rbfox1	94	62.750	Neolamprologus_brichardi
ENSRBIG00000044478	RBFOX1	100	99.758	ENSNLEG00000010017	-	96	99.723	Nomascus_leucogenys
ENSRBIG00000044478	RBFOX1	100	78.406	ENSMEUG00000012525	RBFOX1	93	78.406	Notamacropus_eugenii
ENSRBIG00000044478	RBFOX1	88	98.148	ENSOPRG00000006199	-	76	98.148	Ochotona_princeps
ENSRBIG00000044478	RBFOX1	100	97.938	ENSODEG00000013166	RBFOX1	98	97.938	Octodon_degus
ENSRBIG00000044478	RBFOX1	100	96.543	ENSOANG00000002379	RBFOX1	100	96.543	Ornithorhynchus_anatinus
ENSRBIG00000044478	RBFOX1	60	97.222	ENSOCUG00000001205	-	96	97.222	Oryctolagus_cuniculus
ENSRBIG00000044478	RBFOX1	100	99.742	ENSOGAG00000025535	RBFOX1	98	99.742	Otolemur_garnettii
ENSRBIG00000044478	RBFOX1	65	94.643	ENSOARG00000005135	RBFOX1	96	94.643	Ovis_aries
ENSRBIG00000044478	RBFOX1	100	100.000	ENSPPAG00000036238	-	100	100.000	Pan_paniscus
ENSRBIG00000044478	RBFOX1	100	99.422	ENSPPRG00000006546	RBFOX1	96	98.892	Panthera_pardus
ENSRBIG00000044478	RBFOX1	100	87.629	ENSPTIG00000021154	RBFOX1	99	86.632	Panthera_tigris_altaica
ENSRBIG00000044478	RBFOX1	100	100.000	ENSPTRG00000007744	RBFOX1	96	100.000	Pan_troglodytes
ENSRBIG00000044478	RBFOX1	100	100.000	ENSPANG00000026500	RBFOX1	96	100.000	Papio_anubis
ENSRBIG00000044478	RBFOX1	100	89.532	ENSPKIG00000009667	-	95	90.616	Paramormyrops_kingsleyae
ENSRBIG00000044478	RBFOX1	73	93.156	ENSPKIG00000019353	rbfox1	86	93.156	Paramormyrops_kingsleyae
ENSRBIG00000044478	RBFOX1	100	94.845	ENSPSIG00000006523	RBFOX1	97	94.845	Pelodiscus_sinensis
ENSRBIG00000044478	RBFOX1	100	98.454	ENSPEMG00000017607	Rbfox1	98	98.454	Peromyscus_maniculatus_bairdii
ENSRBIG00000044478	RBFOX1	75	92.759	ENSPCIG00000026887	RBFOX1	100	92.759	Phascolarctos_cinereus
ENSRBIG00000044478	RBFOX1	97	100.000	ENSPPYG00000007079	-	93	100.000	Pongo_abelii
ENSRBIG00000044478	RBFOX1	90	87.679	ENSPCAG00000002630	RBFOX1	92	87.679	Procavia_capensis
ENSRBIG00000044478	RBFOX1	100	99.517	ENSPCOG00000025687	RBFOX1	96	99.446	Propithecus_coquereli
ENSRBIG00000044478	RBFOX1	100	92.288	ENSPVAG00000013467	RBFOX1	93	92.288	Pteropus_vampyrus
ENSRBIG00000044478	RBFOX1	97	87.838	ENSPNAG00000023109	rbfox1	100	87.838	Pygocentrus_nattereri
ENSRBIG00000044478	RBFOX1	100	98.196	ENSRNOG00000002827	Rbfox1	100	97.082	Rattus_norvegicus
ENSRBIG00000044478	RBFOX1	100	100.000	ENSRROG00000044411	RBFOX1	96	100.000	Rhinopithecus_roxellana
ENSRBIG00000044478	RBFOX1	100	99.517	ENSSBOG00000033726	RBFOX1	97	98.969	Saimiri_boliviensis_boliviensis
ENSRBIG00000044478	RBFOX1	100	93.814	ENSSHAG00000009257	RBFOX1	98	93.814	Sarcophilus_harrisii
ENSRBIG00000044478	RBFOX1	89	76.292	ENSSFOG00015009955	-	83	76.292	Scleropages_formosus
ENSRBIG00000044478	RBFOX1	100	77.285	ENSSFOG00015023675	rbfox1	97	77.008	Scleropages_formosus
ENSRBIG00000044478	RBFOX1	100	82.540	ENSSMAG00000015505	rbfox1	94	80.473	Scophthalmus_maximus
ENSRBIG00000044478	RBFOX1	100	80.000	ENSSDUG00000016413	rbfox1	99	79.726	Seriola_dumerili
ENSRBIG00000044478	RBFOX1	86	78.594	ENSSLDG00000009353	rbfox1	95	78.667	Seriola_lalandi_dorsalis
ENSRBIG00000044478	RBFOX1	86	89.776	ENSSPUG00000009732	RBFOX1	87	89.776	Sphenodon_punctatus
ENSRBIG00000044478	RBFOX1	100	81.266	ENSSPAG00000009723	rbfox1	100	81.003	Stegastes_partitus
ENSRBIG00000044478	RBFOX1	100	97.108	ENSSSCG00000007917	RBFOX1	100	98.870	Sus_scrofa
ENSRBIG00000044478	RBFOX1	100	94.845	ENSTGUG00000004562	RBFOX1	99	94.845	Taeniopygia_guttata
ENSRBIG00000044478	RBFOX1	100	80.952	ENSTRUG00000020940	rbfox1	99	80.952	Takifugu_rubripes
ENSRBIG00000044478	RBFOX1	66	62.718	ENSTNIG00000002567	rbfox1	100	64.460	Tetraodon_nigroviridis
ENSRBIG00000044478	RBFOX1	65	100.000	ENSTBEG00000009169	-	56	100.000	Tupaia_belangeri
ENSRBIG00000044478	RBFOX1	100	96.401	ENSTTRG00000005700	RBFOX1	93	96.401	Tursiops_truncatus
ENSRBIG00000044478	RBFOX1	100	95.411	ENSUAMG00000024633	RBFOX1	97	94.778	Ursus_americanus
ENSRBIG00000044478	RBFOX1	99	85.640	ENSUMAG00000003579	RBFOX1	97	85.640	Ursus_maritimus
ENSRBIG00000044478	RBFOX1	79	96.753	ENSVPAG00000001284	RBFOX1	74	96.753	Vicugna_pacos
ENSRBIG00000044478	RBFOX1	100	99.202	ENSVVUG00000017311	RBFOX1	100	99.202	Vulpes_vulpes