EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRBIG00000044907 (Gene tree)
Gene ID: -
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Rhinopithecus_bieti
Status: putative
Strand: Minus strand
Length: 17404 bases
Position: chrMCGX01004891.1:1578859-1596262
Accession: 108536601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRBIP00000043490	CPSF_A	PF03178.15	5.8e-92	1	1
ENSRBIP00000043487	CPSF_A	PF03178.15	1e-91	1	1
ENSRBIP00000043489	CPSF_A	PF03178.15	1.5e-68	1	2
ENSRBIP00000043489	CPSF_A	PF03178.15	1.5e-68	2	2
ENSRBIP00000043488	CPSF_A	PF03178.15	3e-68	1	1
ENSRBIP00000043491	CPSF_A	PF03178.15	2.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRBIT00000067538	CPSF1-203	4161	-	ENSRBIP00000043489	1386 (aa)	-	A0A2K6N625
ENSRBIT00000067540	CPSF1-205	615	-	ENSRBIP00000043491	204 (aa)	-	A0A2K6N667
ENSRBIT00000067536	CPSF1-201	4542	XM_017883508	ENSRBIP00000043487	1442 (aa)	XP_017738997	A0A2K6N680
ENSRBIT00000067537	CPSF1-202	4248	-	ENSRBIP00000043488	1415 (aa)	-	A0A2K6N612
ENSRBIT00000067541	CPSF1-206	447	-	ENSRBIP00000043492	148 (aa)	-	A0A2K6N685
ENSRBIT00000067539	CPSF1-204	3333	-	ENSRBIP00000043490	1110 (aa)	-	A0A2K6N629

Gene Model

Click here to download ENSRBIG00000044907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRBIG00000044907's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRBIG00000044907	CPSF1	100	99.168	ENSG00000071894	CPSF1	100	99.168	Homo_sapiens
ENSRBIG00000044907	CPSF1	100	81.019	ENSAPOG00000019621	cpsf1	100	78.041	Acanthochromis_polyacanthus
ENSRBIG00000044907	CPSF1	97	94.782	ENSAMEG00000005557	CPSF1	100	94.782	Ailuropoda_melanoleuca
ENSRBIG00000044907	CPSF1	100	80.093	ENSACIG00000006112	cpsf1	100	77.924	Amphilophus_citrinellus
ENSRBIG00000044907	CPSF1	100	81.019	ENSAOCG00000007120	cpsf1	100	79.172	Amphiprion_ocellaris
ENSRBIG00000044907	CPSF1	100	81.019	ENSAPEG00000005755	cpsf1	100	79.462	Amphiprion_percula
ENSRBIG00000044907	CPSF1	100	80.556	ENSATEG00000011097	cpsf1	100	77.883	Anabas_testudineus
ENSRBIG00000044907	CPSF1	89	88.690	ENSACAG00000009655	CPSF1	100	81.548	Anolis_carolinensis
ENSRBIG00000044907	CPSF1	100	98.821	ENSANAG00000036514	CPSF1	100	98.821	Aotus_nancymaae
ENSRBIG00000044907	CPSF1	100	79.630	ENSACLG00000012231	cpsf1	99	78.607	Astatotilapia_calliptera
ENSRBIG00000044907	CPSF1	100	80.093	ENSAMXG00000008485	cpsf1	100	74.876	Astyanax_mexicanus
ENSRBIG00000044907	CPSF1	100	94.490	ENSBTAG00000008355	CPSF1	100	94.744	Bos_taurus
ENSRBIG00000044907	CPSF1	99	33.333	WBGene00022301	cpsf-1	100	40.282	Caenorhabditis_elegans
ENSRBIG00000044907	CPSF1	100	98.613	ENSCJAG00000021421	CPSF1	100	98.613	Callithrix_jacchus
ENSRBIG00000044907	CPSF1	97	96.212	ENSCAFG00000001600	CPSF1	100	96.480	Canis_familiaris
ENSRBIG00000044907	CPSF1	100	96.401	ENSCAFG00020020821	CPSF1	100	96.401	Canis_lupus_dingo
ENSRBIG00000044907	CPSF1	98	95.858	ENSCHIG00000015833	CPSF1	100	90.834	Capra_hircus
ENSRBIG00000044907	CPSF1	100	97.712	ENSTSYG00000028560	CPSF1	99	98.830	Carlito_syrichta
ENSRBIG00000044907	CPSF1	97	95.054	ENSCAPG00000014921	CPSF1	99	95.054	Cavia_aperea
ENSRBIG00000044907	CPSF1	100	94.802	ENSCPOG00000011448	CPSF1	100	94.802	Cavia_porcellus
ENSRBIG00000044907	CPSF1	100	98.821	ENSCCAG00000037658	CPSF1	100	98.821	Cebus_capucinus
ENSRBIG00000044907	CPSF1	100	99.723	ENSCATG00000037234	CPSF1	100	99.723	Cercocebus_atys
ENSRBIG00000044907	CPSF1	100	96.602	ENSCLAG00000012166	CPSF1	100	96.602	Chinchilla_lanigera
ENSRBIG00000044907	CPSF1	100	99.653	ENSCSAG00000008502	CPSF1	100	99.653	Chlorocebus_sabaeus
ENSRBIG00000044907	CPSF1	99	87.474	ENSCPBG00000018910	CPSF1	96	87.474	Chrysemys_picta_bellii
ENSRBIG00000044907	CPSF1	93	54.819	ENSCING00000000514	-	100	48.350	Ciona_intestinalis
ENSRBIG00000044907	CPSF1	98	51.479	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSRBIG00000044907	CPSF1	100	99.510	ENSCANG00000032760	CPSF1	100	99.510	Colobus_angolensis_palliatus
ENSRBIG00000044907	CPSF1	100	96.394	ENSCGRG00001016344	Cpsf1	100	96.394	Cricetulus_griseus_chok1gshd
ENSRBIG00000044907	CPSF1	100	97.612	ENSCGRG00000003118	Cpsf1	100	94.313	Cricetulus_griseus_crigri
ENSRBIG00000044907	CPSF1	100	77.509	ENSCSEG00000013464	cpsf1	100	77.370	Cynoglossus_semilaevis
ENSRBIG00000044907	CPSF1	100	81.463	ENSCVAG00000014059	cpsf1	100	81.463	Cyprinodon_variegatus
ENSRBIG00000044907	CPSF1	56	30.065	ENSCVAG00000019531	ddb1	58	30.065	Cyprinodon_variegatus
ENSRBIG00000044907	CPSF1	99	81.250	ENSDARG00000034178	cpsf1	100	79.890	Danio_rerio
ENSRBIG00000044907	CPSF1	59	95.652	ENSDNOG00000043654	CPSF1	94	95.652	Dasypus_novemcinctus
ENSRBIG00000044907	CPSF1	97	95.914	ENSDORG00000006278	Cpsf1	99	95.914	Dipodomys_ordii
ENSRBIG00000044907	CPSF1	98	54.701	FBgn0024698	Cpsf160	100	45.393	Drosophila_melanogaster
ENSRBIG00000044907	CPSF1	83	97.315	ENSETEG00000006022	CPSF1	83	97.315	Echinops_telfairi
ENSRBIG00000044907	CPSF1	90	62.755	ENSEBUG00000006844	-	97	74.541	Eptatretus_burgeri
ENSRBIG00000044907	CPSF1	100	96.955	ENSEASG00005010774	CPSF1	100	96.955	Equus_asinus_asinus
ENSRBIG00000044907	CPSF1	100	96.955	ENSECAG00000022209	CPSF1	100	96.955	Equus_caballus
ENSRBIG00000044907	CPSF1	100	94.602	ENSEEUG00000000471	CPSF1	100	94.602	Erinaceus_europaeus
ENSRBIG00000044907	CPSF1	100	80.093	ENSELUG00000012271	cpsf1	100	78.630	Esox_lucius
ENSRBIG00000044907	CPSF1	100	96.533	ENSFDAG00000016060	CPSF1	100	96.533	Fukomys_damarensis
ENSRBIG00000044907	CPSF1	99	78.571	ENSFHEG00000016801	cpsf1	100	76.653	Fundulus_heteroclitus
ENSRBIG00000044907	CPSF1	100	79.167	ENSGMOG00000000796	cpsf1	100	77.931	Gadus_morhua
ENSRBIG00000044907	CPSF1	95	85.714	ENSGAFG00000018890	cpsf1	100	85.714	Gambusia_affinis
ENSRBIG00000044907	CPSF1	56	30.065	ENSGAFG00000013142	ddb1	57	30.065	Gambusia_affinis
ENSRBIG00000044907	CPSF1	100	79.167	ENSGACG00000008703	cpsf1	100	78.404	Gasterosteus_aculeatus
ENSRBIG00000044907	CPSF1	99	88.657	ENSGAGG00000004276	CPSF1	98	87.416	Gopherus_agassizii
ENSRBIG00000044907	CPSF1	100	99.307	ENSGGOG00000016185	CPSF1	100	99.307	Gorilla_gorilla
ENSRBIG00000044907	CPSF1	100	62.745	ENSGGOG00000040487	-	100	70.833	Gorilla_gorilla
ENSRBIG00000044907	CPSF1	100	79.630	ENSHBUG00000018900	cpsf1	100	79.308	Haplochromis_burtoni
ENSRBIG00000044907	CPSF1	100	96.394	ENSHGLG00000016139	CPSF1	100	96.394	Heterocephalus_glaber_female
ENSRBIG00000044907	CPSF1	100	96.325	ENSHGLG00100009750	CPSF1	100	96.325	Heterocephalus_glaber_male
ENSRBIG00000044907	CPSF1	100	78.241	ENSHCOG00000018509	cpsf1	100	76.798	Hippocampus_comes
ENSRBIG00000044907	CPSF1	100	80.556	ENSIPUG00000011259	cpsf1	100	76.632	Ictalurus_punctatus
ENSRBIG00000044907	CPSF1	97	96.500	ENSSTOG00000009957	CPSF1	99	96.500	Ictidomys_tridecemlineatus
ENSRBIG00000044907	CPSF1	100	96.325	ENSJJAG00000023002	Cpsf1	100	96.325	Jaculus_jaculus
ENSRBIG00000044907	CPSF1	56	30.065	ENSKMAG00000002315	ddb1	58	30.065	Kryptolebias_marmoratus
ENSRBIG00000044907	CPSF1	91	85.893	ENSKMAG00000001940	cpsf1	99	85.893	Kryptolebias_marmoratus
ENSRBIG00000044907	CPSF1	100	79.167	ENSLBEG00000003601	cpsf1	100	77.657	Labrus_bergylta
ENSRBIG00000044907	CPSF1	100	82.407	ENSLACG00000000233	CPSF1	92	81.370	Latimeria_chalumnae
ENSRBIG00000044907	CPSF1	100	82.110	ENSLOCG00000008484	cpsf1	100	78.261	Lepisosteus_oculatus
ENSRBIG00000044907	CPSF1	97	95.351	ENSLAFG00000022601	CPSF1	100	95.351	Loxodonta_africana
ENSRBIG00000044907	CPSF1	100	99.723	ENSMFAG00000037013	CPSF1	100	99.723	Macaca_fascicularis
ENSRBIG00000044907	CPSF1	100	99.792	ENSMMUG00000007380	CPSF1	100	99.792	Macaca_mulatta
ENSRBIG00000044907	CPSF1	100	99.510	ENSMNEG00000043564	CPSF1	100	99.713	Macaca_nemestrina
ENSRBIG00000044907	CPSF1	100	99.723	ENSMLEG00000043010	CPSF1	100	99.723	Mandrillus_leucophaeus
ENSRBIG00000044907	CPSF1	100	80.556	ENSMAMG00000003803	cpsf1	100	78.243	Mastacembelus_armatus
ENSRBIG00000044907	CPSF1	100	79.630	ENSMZEG00005001168	cpsf1	100	77.163	Maylandia_zebra
ENSRBIG00000044907	CPSF1	100	96.255	ENSMAUG00000003601	Cpsf1	100	96.255	Mesocricetus_auratus
ENSRBIG00000044907	CPSF1	100	97.365	ENSMICG00000015767	CPSF1	100	97.365	Microcebus_murinus
ENSRBIG00000044907	CPSF1	100	96.463	ENSMOCG00000022758	Cpsf1	100	96.463	Microtus_ochrogaster
ENSRBIG00000044907	CPSF1	100	78.907	ENSMMOG00000021245	cpsf1	100	78.700	Mola_mola
ENSRBIG00000044907	CPSF1	100	92.966	ENSMODG00000010755	CPSF1	100	92.966	Monodelphis_domestica
ENSRBIG00000044907	CPSF1	100	79.630	ENSMALG00000020545	cpsf1	100	77.605	Monopterus_albus
ENSRBIG00000044907	CPSF1	100	96.602	MGP_CAROLIEiJ_G0019936	Cpsf1	100	96.602	Mus_caroli
ENSRBIG00000044907	CPSF1	100	96.533	ENSMUSG00000034022	Cpsf1	100	96.533	Mus_musculus
ENSRBIG00000044907	CPSF1	100	96.533	MGP_PahariEiJ_G0019946	Cpsf1	100	96.533	Mus_pahari
ENSRBIG00000044907	CPSF1	100	96.533	MGP_SPRETEiJ_G0020839	Cpsf1	100	96.533	Mus_spretus
ENSRBIG00000044907	CPSF1	94	95.630	ENSMPUG00000006419	CPSF1	93	95.630	Mustela_putorius_furo
ENSRBIG00000044907	CPSF1	78	97.484	ENSMLUG00000000667	-	100	96.667	Myotis_lucifugus
ENSRBIG00000044907	CPSF1	100	96.325	ENSNGAG00000022460	Cpsf1	100	96.325	Nannospalax_galili
ENSRBIG00000044907	CPSF1	100	79.630	ENSNBRG00000000813	cpsf1	100	74.931	Neolamprologus_brichardi
ENSRBIG00000044907	CPSF1	100	98.529	ENSNLEG00000010633	-	100	98.529	Nomascus_leucogenys
ENSRBIG00000044907	CPSF1	85	96.512	ENSMEUG00000014922	CPSF1	85	96.512	Notamacropus_eugenii
ENSRBIG00000044907	CPSF1	61	96.939	ENSOPRG00000004693	-	71	96.939	Ochotona_princeps
ENSRBIG00000044907	CPSF1	100	96.671	ENSODEG00000013995	CPSF1	100	96.671	Octodon_degus
ENSRBIG00000044907	CPSF1	100	79.862	ENSONIG00000007676	cpsf1	100	79.585	Oreochromis_niloticus
ENSRBIG00000044907	CPSF1	60	89.583	ENSOANG00000010716	CPSF1	88	91.429	Ornithorhynchus_anatinus
ENSRBIG00000044907	CPSF1	100	78.241	ENSORLG00000013544	cpsf1	92	87.243	Oryzias_latipes
ENSRBIG00000044907	CPSF1	100	78.241	ENSORLG00020021693	cpsf1	92	87.243	Oryzias_latipes_hni
ENSRBIG00000044907	CPSF1	100	78.241	ENSORLG00015009979	cpsf1	100	77.362	Oryzias_latipes_hsok
ENSRBIG00000044907	CPSF1	100	78.241	ENSOMEG00000011849	cpsf1	100	77.468	Oryzias_melastigma
ENSRBIG00000044907	CPSF1	100	97.434	ENSOGAG00000000315	CPSF1	100	97.434	Otolemur_garnettii
ENSRBIG00000044907	CPSF1	53	84.462	ENSOARG00000013594	-	89	92.063	Ovis_aries
ENSRBIG00000044907	CPSF1	100	99.376	ENSPPAG00000019280	CPSF1	100	99.376	Pan_paniscus
ENSRBIG00000044907	CPSF1	100	61.765	ENSPTRG00000052516	-	100	69.444	Pan_troglodytes
ENSRBIG00000044907	CPSF1	100	99.020	ENSPTRG00000051253	-	100	99.020	Pan_troglodytes
ENSRBIG00000044907	CPSF1	100	99.376	ENSPTRG00000049288	-	100	99.376	Pan_troglodytes
ENSRBIG00000044907	CPSF1	100	99.020	ENSPANG00000015005	CPSF1	100	99.713	Papio_anubis
ENSRBIG00000044907	CPSF1	100	81.944	ENSPKIG00000002582	cpsf1	100	80.743	Paramormyrops_kingsleyae
ENSRBIG00000044907	CPSF1	100	76.389	ENSPMGG00000022177	-	100	84.259	Periophthalmus_magnuspinnatus
ENSRBIG00000044907	CPSF1	100	92.897	ENSPCIG00000009035	CPSF1	100	92.897	Phascolarctos_cinereus
ENSRBIG00000044907	CPSF1	100	76.852	ENSPFOG00000012870	cpsf1	100	76.252	Poecilia_formosa
ENSRBIG00000044907	CPSF1	64	30.827	ENSPLAG00000017227	ddb1	57	30.065	Poecilia_latipinna
ENSRBIG00000044907	CPSF1	64	30.827	ENSPMEG00000011398	ddb1	57	30.065	Poecilia_mexicana
ENSRBIG00000044907	CPSF1	56	30.065	ENSPREG00000004440	ddb1	59	30.065	Poecilia_reticulata
ENSRBIG00000044907	CPSF1	100	76.403	ENSPREG00000016307	cpsf1	100	76.200	Poecilia_reticulata
ENSRBIG00000044907	CPSF1	93	99.636	ENSPPYG00000018973	CPSF1	100	90.915	Pongo_abelii
ENSRBIG00000044907	CPSF1	91	94.886	ENSPCAG00000011541	CPSF1	94	94.886	Procavia_capensis
ENSRBIG00000044907	CPSF1	98	98.209	ENSPCOG00000020001	CPSF1	100	94.175	Propithecus_coquereli
ENSRBIG00000044907	CPSF1	91	98.571	ENSPVAG00000006761	CPSF1	91	98.571	Pteropus_vampyrus
ENSRBIG00000044907	CPSF1	100	79.630	ENSPNYG00000004906	cpsf1	100	78.279	Pundamilia_nyererei
ENSRBIG00000044907	CPSF1	99	79.464	ENSPNAG00000024395	cpsf1	100	75.207	Pygocentrus_nattereri
ENSRBIG00000044907	CPSF1	100	96.602	ENSRNOG00000030705	Cpsf1	100	96.602	Rattus_norvegicus
ENSRBIG00000044907	CPSF1	100	100.000	ENSRROG00000044861	CPSF1	100	100.000	Rhinopithecus_roxellana
ENSRBIG00000044907	CPSF1	97	98.637	ENSSBOG00000027177	CPSF1	100	98.637	Saimiri_boliviensis_boliviensis
ENSRBIG00000044907	CPSF1	100	92.621	ENSSHAG00000006500	CPSF1	100	92.621	Sarcophilus_harrisii
ENSRBIG00000044907	CPSF1	100	82.407	ENSSFOG00015004606	cpsf1	100	81.164	Scleropages_formosus
ENSRBIG00000044907	CPSF1	100	81.019	ENSSMAG00000020547	cpsf1	100	77.876	Scophthalmus_maximus
ENSRBIG00000044907	CPSF1	100	80.556	ENSSDUG00000001100	cpsf1	100	79.129	Seriola_dumerili
ENSRBIG00000044907	CPSF1	100	80.556	ENSSLDG00000003619	cpsf1	100	79.184	Seriola_lalandi_dorsalis
ENSRBIG00000044907	CPSF1	89	100.000	ENSSARG00000003643	CPSF1	92	100.000	Sorex_araneus
ENSRBIG00000044907	CPSF1	100	88.725	ENSSPUG00000014396	CPSF1	100	88.725	Sphenodon_punctatus
ENSRBIG00000044907	CPSF1	100	80.556	ENSSPAG00000005349	cpsf1	100	78.093	Stegastes_partitus
ENSRBIG00000044907	CPSF1	100	95.848	ENSSSCG00000005906	CPSF1	100	95.848	Sus_scrofa
ENSRBIG00000044907	CPSF1	100	77.315	ENSTRUG00000013134	cpsf1	99	77.622	Takifugu_rubripes
ENSRBIG00000044907	CPSF1	100	78.694	ENSTNIG00000014027	cpsf1	100	78.488	Tetraodon_nigroviridis
ENSRBIG00000044907	CPSF1	79	89.138	ENSTBEG00000001756	CPSF1	91	89.138	Tupaia_belangeri
ENSRBIG00000044907	CPSF1	100	88.889	ENSTTRG00000001937	CPSF1	90	96.546	Tursiops_truncatus
ENSRBIG00000044907	CPSF1	97	96.497	ENSUAMG00000006476	CPSF1	98	96.497	Ursus_americanus
ENSRBIG00000044907	CPSF1	67	54.967	ENSVPAG00000000157	-	50	93.991	Vicugna_pacos
ENSRBIG00000044907	CPSF1	100	93.627	ENSVVUG00000005940	-	100	93.627	Vulpes_vulpes
ENSRBIG00000044907	CPSF1	100	77.455	ENSXCOG00000003608	cpsf1	100	77.248	Xiphophorus_couchianus
ENSRBIG00000044907	CPSF1	100	76.934	ENSXMAG00000005798	cpsf1	100	76.934	Xiphophorus_maculatus
ENSRBIG00000044907	CPSF1	56	30.065	ENSXMAG00000000022	ddb1	57	30.065	Xiphophorus_maculatus