EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000000104 (Gene tree)
Gene ID: 290519
Gene Symbol: Thoc3
Alias: LOC290519
Full Name: THO complex 3
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 9192 bases
Position: chr17:10676943-10686134
Accession: 1311669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000000116	eIF2A	PF08662.11	2.6e-12	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000000116	-	2115	-	ENSRNOP00000000116	351 (aa)	-	B5DEY5

Gene Model

Click here to download ENSRNOG00000000104's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03013	RNA transport	KEGG
rno03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000000104's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000000104	Thoc3	100	98.860	ENSG00000051596	THOC3	100	98.860	Homo_sapiens
ENSRNOG00000000104	Thoc3	91	93.125	ENSAPOG00000010591	thoc3	99	93.125	Acanthochromis_polyacanthus
ENSRNOG00000000104	Thoc3	100	98.291	ENSAMEG00000006936	THOC3	99	98.291	Ailuropoda_melanoleuca
ENSRNOG00000000104	Thoc3	91	92.812	ENSACIG00000010364	thoc3	99	92.812	Amphilophus_citrinellus
ENSRNOG00000000104	Thoc3	91	92.812	ENSAOCG00000013548	thoc3	99	92.812	Amphiprion_ocellaris
ENSRNOG00000000104	Thoc3	91	92.812	ENSAPEG00000003216	thoc3	99	92.812	Amphiprion_percula
ENSRNOG00000000104	Thoc3	91	92.812	ENSATEG00000017937	thoc3	99	92.812	Anabas_testudineus
ENSRNOG00000000104	Thoc3	100	98.291	ENSANAG00000036291	THOC3	100	98.291	Aotus_nancymaae
ENSRNOG00000000104	Thoc3	91	92.188	ENSACLG00000017219	thoc3	99	92.188	Astatotilapia_calliptera
ENSRNOG00000000104	Thoc3	98	88.630	ENSAMXG00000010750	thoc3	99	92.812	Astyanax_mexicanus
ENSRNOG00000000104	Thoc3	100	98.006	ENSBTAG00000035174	THOC3	100	98.006	Bos_taurus
ENSRNOG00000000104	Thoc3	93	99.080	ENSCJAG00000046031	THOC3	87	99.080	Callithrix_jacchus
ENSRNOG00000000104	Thoc3	100	98.575	ENSCAFG00000014320	THOC3	100	98.575	Canis_familiaris
ENSRNOG00000000104	Thoc3	100	98.575	ENSCAFG00020011477	THOC3	100	98.575	Canis_lupus_dingo
ENSRNOG00000000104	Thoc3	100	98.291	ENSCHIG00000021665	THOC3	100	98.291	Capra_hircus
ENSRNOG00000000104	Thoc3	100	72.080	ENSTSYG00000009507	-	100	72.080	Carlito_syrichta
ENSRNOG00000000104	Thoc3	99	80.000	ENSCPOG00000025805	THOC3	99	83.143	Cavia_porcellus
ENSRNOG00000000104	Thoc3	100	98.291	ENSCATG00000029038	THOC3	100	98.291	Cercocebus_atys
ENSRNOG00000000104	Thoc3	99	98.571	ENSCLAG00000015924	THOC3	99	98.571	Chinchilla_lanigera
ENSRNOG00000000104	Thoc3	100	98.575	ENSCSAG00000009454	THOC3	100	98.575	Chlorocebus_sabaeus
ENSRNOG00000000104	Thoc3	75	98.485	ENSCPBG00000022672	THOC3	81	98.485	Chrysemys_picta_bellii
ENSRNOG00000000104	Thoc3	90	66.246	ENSCSAVG00000011041	-	99	66.246	Ciona_savignyi
ENSRNOG00000000104	Thoc3	100	98.291	ENSCANG00000008964	THOC3	100	98.291	Colobus_angolensis_palliatus
ENSRNOG00000000104	Thoc3	100	97.721	ENSCGRG00001022944	Thoc3	92	97.721	Cricetulus_griseus_chok1gshd
ENSRNOG00000000104	Thoc3	100	97.721	ENSCGRG00000012133	Thoc3	100	97.721	Cricetulus_griseus_crigri
ENSRNOG00000000104	Thoc3	91	92.188	ENSCVAG00000006941	thoc3	99	92.188	Cyprinodon_variegatus
ENSRNOG00000000104	Thoc3	91	91.562	ENSDARG00000056517	thoc3	99	91.562	Danio_rerio
ENSRNOG00000000104	Thoc3	100	98.575	ENSDNOG00000037214	THOC3	100	98.575	Dasypus_novemcinctus
ENSRNOG00000000104	Thoc3	75	99.237	ENSDORG00000014084	Thoc3	89	99.237	Dipodomys_ordii
ENSRNOG00000000104	Thoc3	88	63.548	FBgn0037569	tex	96	63.548	Drosophila_melanogaster
ENSRNOG00000000104	Thoc3	100	95.157	ENSETEG00000020137	THOC3	100	95.157	Echinops_telfairi
ENSRNOG00000000104	Thoc3	91	84.783	ENSEBUG00000004516	thoc3	99	84.783	Eptatretus_burgeri
ENSRNOG00000000104	Thoc3	100	98.291	ENSEASG00005011970	THOC3	100	98.291	Equus_asinus_asinus
ENSRNOG00000000104	Thoc3	100	98.006	ENSECAG00000011555	THOC3	100	98.006	Equus_caballus
ENSRNOG00000000104	Thoc3	91	91.875	ENSELUG00000022058	thoc3	99	91.875	Esox_lucius
ENSRNOG00000000104	Thoc3	91	96.250	ENSFALG00000008536	THOC3	98	93.134	Ficedula_albicollis
ENSRNOG00000000104	Thoc3	99	98.857	ENSFDAG00000015062	THOC3	99	98.857	Fukomys_damarensis
ENSRNOG00000000104	Thoc3	91	91.250	ENSFHEG00000019958	thoc3	99	91.250	Fundulus_heteroclitus
ENSRNOG00000000104	Thoc3	91	91.250	ENSGMOG00000019136	-	99	91.250	Gadus_morhua
ENSRNOG00000000104	Thoc3	90	95.268	ENSGALG00000024172	THOC3	83	95.268	Gallus_gallus
ENSRNOG00000000104	Thoc3	91	91.562	ENSGAFG00000016531	thoc3	97	91.562	Gambusia_affinis
ENSRNOG00000000104	Thoc3	91	92.188	ENSGACG00000016353	thoc3	99	92.188	Gasterosteus_aculeatus
ENSRNOG00000000104	Thoc3	91	95.938	ENSGAGG00000013237	THOC3	99	95.938	Gopherus_agassizii
ENSRNOG00000000104	Thoc3	100	98.291	ENSGGOG00000012127	-	100	98.291	Gorilla_gorilla
ENSRNOG00000000104	Thoc3	91	92.188	ENSHBUG00000023812	thoc3	99	92.188	Haplochromis_burtoni
ENSRNOG00000000104	Thoc3	100	98.291	ENSHGLG00000008773	THOC3	100	98.291	Heterocephalus_glaber_female
ENSRNOG00000000104	Thoc3	100	98.291	ENSHGLG00100013354	THOC3	100	98.291	Heterocephalus_glaber_male
ENSRNOG00000000104	Thoc3	91	89.375	ENSHCOG00000003522	thoc3	99	89.375	Hippocampus_comes
ENSRNOG00000000104	Thoc3	91	91.875	ENSIPUG00000001292	thoc3	94	91.875	Ictalurus_punctatus
ENSRNOG00000000104	Thoc3	100	96.296	ENSJJAG00000010704	Thoc3	100	96.296	Jaculus_jaculus
ENSRNOG00000000104	Thoc3	91	91.875	ENSKMAG00000017815	thoc3	99	91.875	Kryptolebias_marmoratus
ENSRNOG00000000104	Thoc3	91	91.562	ENSLBEG00000006512	thoc3	99	91.562	Labrus_bergylta
ENSRNOG00000000104	Thoc3	91	96.250	ENSLACG00000014556	THOC3	99	96.250	Latimeria_chalumnae
ENSRNOG00000000104	Thoc3	91	94.062	ENSLOCG00000011610	thoc3	99	94.062	Lepisosteus_oculatus
ENSRNOG00000000104	Thoc3	100	98.291	ENSLAFG00000016609	THOC3	100	98.291	Loxodonta_africana
ENSRNOG00000000104	Thoc3	100	98.575	ENSMFAG00000034476	THOC3	100	98.575	Macaca_fascicularis
ENSRNOG00000000104	Thoc3	100	98.575	ENSMMUG00000018737	THOC3	100	98.575	Macaca_mulatta
ENSRNOG00000000104	Thoc3	100	98.575	ENSMNEG00000043023	THOC3	100	98.575	Macaca_nemestrina
ENSRNOG00000000104	Thoc3	100	98.291	ENSMLEG00000002508	THOC3	100	98.291	Mandrillus_leucophaeus
ENSRNOG00000000104	Thoc3	91	93.082	ENSMAMG00000013229	thoc3	99	93.082	Mastacembelus_armatus
ENSRNOG00000000104	Thoc3	91	92.188	ENSMZEG00005020327	thoc3	99	92.188	Maylandia_zebra
ENSRNOG00000000104	Thoc3	75	98.859	ENSMGAG00000004766	THOC3	99	98.859	Meleagris_gallopavo
ENSRNOG00000000104	Thoc3	100	98.006	ENSMAUG00000011225	Thoc3	100	98.006	Mesocricetus_auratus
ENSRNOG00000000104	Thoc3	100	86.040	ENSMICG00000031354	-	100	86.040	Microcebus_murinus
ENSRNOG00000000104	Thoc3	100	98.006	ENSMICG00000028441	-	100	98.006	Microcebus_murinus
ENSRNOG00000000104	Thoc3	100	96.866	ENSMOCG00000015290	Thoc3	100	96.866	Microtus_ochrogaster
ENSRNOG00000000104	Thoc3	91	92.812	ENSMMOG00000000373	thoc3	99	92.812	Mola_mola
ENSRNOG00000000104	Thoc3	94	75.831	ENSMODG00000025275	-	100	75.831	Monodelphis_domestica
ENSRNOG00000000104	Thoc3	95	96.697	ENSMODG00000005339	THOC3	100	93.732	Monodelphis_domestica
ENSRNOG00000000104	Thoc3	91	92.188	ENSMALG00000002645	thoc3	99	92.188	Monopterus_albus
ENSRNOG00000000104	Thoc3	100	99.430	MGP_CAROLIEiJ_G0018534	Thoc3	100	99.430	Mus_caroli
ENSRNOG00000000104	Thoc3	100	99.430	ENSMUSG00000025872	Thoc3	100	99.430	Mus_musculus
ENSRNOG00000000104	Thoc3	100	98.860	MGP_PahariEiJ_G0019599	Thoc3	100	98.860	Mus_pahari
ENSRNOG00000000104	Thoc3	100	99.430	MGP_SPRETEiJ_G0019414	Thoc3	100	99.430	Mus_spretus
ENSRNOG00000000104	Thoc3	87	96.066	ENSMPUG00000012598	THOC3	86	96.066	Mustela_putorius_furo
ENSRNOG00000000104	Thoc3	100	91.453	ENSMLUG00000027411	-	100	91.453	Myotis_lucifugus
ENSRNOG00000000104	Thoc3	100	98.291	ENSMLUG00000005412	-	100	98.291	Myotis_lucifugus
ENSRNOG00000000104	Thoc3	100	88.889	ENSMLUG00000026903	-	100	88.889	Myotis_lucifugus
ENSRNOG00000000104	Thoc3	100	97.721	ENSNGAG00000010934	-	100	97.721	Nannospalax_galili
ENSRNOG00000000104	Thoc3	99	86.610	ENSNBRG00000013917	thoc3	98	86.610	Neolamprologus_brichardi
ENSRNOG00000000104	Thoc3	100	98.291	ENSNLEG00000000593	THOC3	100	98.291	Nomascus_leucogenys
ENSRNOG00000000104	Thoc3	91	98.442	ENSMEUG00000001068	THOC3	100	92.877	Notamacropus_eugenii
ENSRNOG00000000104	Thoc3	91	72.100	ENSMEUG00000013439	-	98	72.100	Notamacropus_eugenii
ENSRNOG00000000104	Thoc3	99	98.571	ENSODEG00000010186	THOC3	99	98.571	Octodon_degus
ENSRNOG00000000104	Thoc3	91	92.812	ENSONIG00000004291	thoc3	99	92.812	Oreochromis_niloticus
ENSRNOG00000000104	Thoc3	100	98.006	ENSOCUG00000016387	THOC3	100	98.006	Oryctolagus_cuniculus
ENSRNOG00000000104	Thoc3	91	93.125	ENSORLG00000030384	thoc3	91	93.125	Oryzias_latipes
ENSRNOG00000000104	Thoc3	91	93.125	ENSORLG00020016372	thoc3	99	93.125	Oryzias_latipes_hni
ENSRNOG00000000104	Thoc3	91	93.125	ENSORLG00015000336	thoc3	99	93.125	Oryzias_latipes_hsok
ENSRNOG00000000104	Thoc3	91	93.438	ENSOMEG00000021977	thoc3	99	93.438	Oryzias_melastigma
ENSRNOG00000000104	Thoc3	100	98.575	ENSOGAG00000003503	THOC3	100	98.575	Otolemur_garnettii
ENSRNOG00000000104	Thoc3	100	95.442	ENSOARG00000016600	THOC3	100	95.442	Ovis_aries
ENSRNOG00000000104	Thoc3	100	98.860	ENSPPAG00000006020	THOC3	100	98.860	Pan_paniscus
ENSRNOG00000000104	Thoc3	100	98.575	ENSPPRG00000020316	THOC3	100	98.575	Panthera_pardus
ENSRNOG00000000104	Thoc3	75	100.000	ENSPTIG00000011325	THOC3	75	100.000	Panthera_tigris_altaica
ENSRNOG00000000104	Thoc3	100	98.860	ENSPTRG00000017594	THOC3	100	98.860	Pan_troglodytes
ENSRNOG00000000104	Thoc3	100	98.291	ENSPANG00000012114	THOC3	100	98.291	Papio_anubis
ENSRNOG00000000104	Thoc3	91	92.188	ENSPKIG00000000208	thoc3	99	92.188	Paramormyrops_kingsleyae
ENSRNOG00000000104	Thoc3	91	89.688	ENSPMGG00000017949	thoc3	99	89.688	Periophthalmus_magnuspinnatus
ENSRNOG00000000104	Thoc3	100	97.721	ENSPEMG00000003118	Thoc3	100	97.721	Peromyscus_maniculatus_bairdii
ENSRNOG00000000104	Thoc3	90	86.984	ENSPMAG00000007069	thoc3	98	86.984	Petromyzon_marinus
ENSRNOG00000000104	Thoc3	95	88.922	ENSPFOG00000007685	thoc3	96	88.922	Poecilia_formosa
ENSRNOG00000000104	Thoc3	91	91.562	ENSPLAG00000003581	thoc3	97	91.562	Poecilia_latipinna
ENSRNOG00000000104	Thoc3	91	91.562	ENSPMEG00000005565	thoc3	97	91.562	Poecilia_mexicana
ENSRNOG00000000104	Thoc3	91	91.562	ENSPREG00000014916	thoc3	92	91.562	Poecilia_reticulata
ENSRNOG00000000104	Thoc3	100	98.575	ENSPPYG00000016066	THOC3	100	98.575	Pongo_abelii
ENSRNOG00000000104	Thoc3	100	98.575	ENSPCOG00000023245	THOC3	100	98.575	Propithecus_coquereli
ENSRNOG00000000104	Thoc3	100	98.006	ENSPVAG00000012450	THOC3	100	98.006	Pteropus_vampyrus
ENSRNOG00000000104	Thoc3	91	92.188	ENSPNYG00000016612	thoc3	99	92.188	Pundamilia_nyererei
ENSRNOG00000000104	Thoc3	91	91.562	ENSPNAG00000005252	thoc3	99	91.562	Pygocentrus_nattereri
ENSRNOG00000000104	Thoc3	100	98.575	ENSRBIG00000039571	THOC3	100	98.575	Rhinopithecus_bieti
ENSRNOG00000000104	Thoc3	100	98.575	ENSRROG00000031032	THOC3	100	98.575	Rhinopithecus_roxellana
ENSRNOG00000000104	Thoc3	100	98.291	ENSSBOG00000022663	THOC3	100	98.291	Saimiri_boliviensis_boliviensis
ENSRNOG00000000104	Thoc3	97	70.435	ENSSHAG00000013075	-	99	70.435	Sarcophilus_harrisii
ENSRNOG00000000104	Thoc3	97	93.567	ENSSHAG00000010757	THOC3	95	93.567	Sarcophilus_harrisii
ENSRNOG00000000104	Thoc3	93	93.846	ENSSFOG00015001867	thoc3	94	93.846	Scleropages_formosus
ENSRNOG00000000104	Thoc3	91	93.438	ENSSMAG00000006786	thoc3	99	93.438	Scophthalmus_maximus
ENSRNOG00000000104	Thoc3	91	93.125	ENSSDUG00000008924	thoc3	99	93.125	Seriola_dumerili
ENSRNOG00000000104	Thoc3	91	93.125	ENSSLDG00000019128	thoc3	99	93.125	Seriola_lalandi_dorsalis
ENSRNOG00000000104	Thoc3	91	95.312	ENSSPUG00000006652	THOC3	99	95.312	Sphenodon_punctatus
ENSRNOG00000000104	Thoc3	91	93.438	ENSSPAG00000014229	thoc3	99	93.438	Stegastes_partitus
ENSRNOG00000000104	Thoc3	100	98.575	ENSSSCG00000014061	THOC3	100	98.575	Sus_scrofa
ENSRNOG00000000104	Thoc3	89	94.888	ENSTGUG00000000557	THOC3	99	94.888	Taeniopygia_guttata
ENSRNOG00000000104	Thoc3	99	85.673	ENSTRUG00000002925	thoc3	99	85.673	Takifugu_rubripes
ENSRNOG00000000104	Thoc3	91	90.000	ENSTNIG00000012958	thoc3	99	90.000	Tetraodon_nigroviridis
ENSRNOG00000000104	Thoc3	75	100.000	ENSTTRG00000014865	THOC3	100	100.000	Tursiops_truncatus
ENSRNOG00000000104	Thoc3	100	98.291	ENSUAMG00000010691	THOC3	100	98.291	Ursus_americanus
ENSRNOG00000000104	Thoc3	98	98.837	ENSUMAG00000024511	THOC3	100	98.837	Ursus_maritimus
ENSRNOG00000000104	Thoc3	90	88.644	ENSXETG00000022316	thoc3	98	88.644	Xenopus_tropicalis
ENSRNOG00000000104	Thoc3	91	91.562	ENSXCOG00000001378	thoc3	99	91.562	Xiphophorus_couchianus
ENSRNOG00000000104	Thoc3	91	91.562	ENSXMAG00000003232	thoc3	97	91.562	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000346	transcription export complex	-	ISO	Component
GO:0000445	THO complex part of transcription export complex	21873635.	IBA	Component
GO:0000445	THO complex part of transcription export complex	-	ISO	Component
GO:0000784	nuclear chromosome, telomeric region	-	IEA	Component
GO:0000784	nuclear chromosome, telomeric region	-	ISO	Component
GO:0006406	mRNA export from nucleus	21873635.	IBA	Process
GO:0006406	mRNA export from nucleus	-	ISO	Process
GO:0046784	viral mRNA export from host cell nucleus	-	IEA	Process
GO:0046784	viral mRNA export from host cell nucleus	-	ISO	Process