EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000000248 (Gene tree)
Gene ID: 494445
Gene Symbol: Srsf2
Alias: MGC73009|SC-35|Sfrs2
Full Name: serine and arginine rich splicing factor 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 3180 bases
Position: chr10:105792779-105795958
Accession: 1359422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000059012	RRM_1	PF00076.22	5.1e-22	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000067739	-	1901	XM_006247813	ENSRNOP00000059012	221 (aa)	XP_006247875	Q6PDU1

Gene Model

Click here to download ENSRNOG00000000248's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03040	Spliceosome	KEGG
rno05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000000248's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000000248	Srsf2	85	38.298	ENSRNOG00000007992	Srsf10	51	46.591

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000000248	Srsf2	100	100.000	ENSG00000161547	SRSF2	100	100.000	Homo_sapiens
ENSRNOG00000000248	Srsf2	100	99.095	ENSACAG00000008553	-	100	99.095	Anolis_carolinensis
ENSRNOG00000000248	Srsf2	100	100.000	ENSANAG00000004226	SRSF2	100	100.000	Aotus_nancymaae
ENSRNOG00000000248	Srsf2	100	100.000	ENSBTAG00000018258	SRSF2	100	100.000	Bos_taurus
ENSRNOG00000000248	Srsf2	100	100.000	ENSCJAG00000041154	SRSF2	100	100.000	Callithrix_jacchus
ENSRNOG00000000248	Srsf2	100	99.548	ENSCAFG00000005147	SRSF2	100	99.548	Canis_familiaris
ENSRNOG00000000248	Srsf2	100	100.000	ENSCAFG00020006267	-	100	100.000	Canis_lupus_dingo
ENSRNOG00000000248	Srsf2	100	100.000	ENSCHIG00000017001	-	100	100.000	Capra_hircus
ENSRNOG00000000248	Srsf2	50	100.000	ENSTSYG00000006517	-	50	100.000	Carlito_syrichta
ENSRNOG00000000248	Srsf2	100	99.095	ENSCCAG00000037532	SRSF2	100	99.095	Cebus_capucinus
ENSRNOG00000000248	Srsf2	100	100.000	ENSCATG00000033650	SRSF2	100	100.000	Cercocebus_atys
ENSRNOG00000000248	Srsf2	100	100.000	ENSCSAG00000005108	SRSF2	100	100.000	Chlorocebus_sabaeus
ENSRNOG00000000248	Srsf2	100	100.000	ENSCPBG00000027975	-	100	100.000	Chrysemys_picta_bellii
ENSRNOG00000000248	Srsf2	100	100.000	ENSCANG00000028176	SRSF2	100	100.000	Colobus_angolensis_palliatus
ENSRNOG00000000248	Srsf2	100	100.000	ENSCGRG00001023483	Srsf2	100	100.000	Cricetulus_griseus_chok1gshd
ENSRNOG00000000248	Srsf2	54	94.167	ENSDARG00000057484	srsf2a	85	96.000	Danio_rerio
ENSRNOG00000000248	Srsf2	100	100.000	ENSDNOG00000000439	-	100	100.000	Dasypus_novemcinctus
ENSRNOG00000000248	Srsf2	100	100.000	ENSEASG00005004319	-	100	100.000	Equus_asinus_asinus
ENSRNOG00000000248	Srsf2	100	100.000	ENSECAG00000033515	-	100	100.000	Equus_caballus
ENSRNOG00000000248	Srsf2	100	100.000	ENSFCAG00000043466	-	100	100.000	Felis_catus
ENSRNOG00000000248	Srsf2	100	98.190	ENSGALG00000017357	SRSF2	100	98.190	Gallus_gallus
ENSRNOG00000000248	Srsf2	100	100.000	ENSGAGG00000024457	-	100	100.000	Gopherus_agassizii
ENSRNOG00000000248	Srsf2	100	92.760	ENSGGOG00000014378	SRSF2	100	92.760	Gorilla_gorilla
ENSRNOG00000000248	Srsf2	100	100.000	ENSHGLG00000017262	-	100	100.000	Heterocephalus_glaber_female
ENSRNOG00000000248	Srsf2	100	100.000	ENSJJAG00000013794	Srsf2	100	100.000	Jaculus_jaculus
ENSRNOG00000000248	Srsf2	51	95.536	ENSLACG00000013394	srsf2a	51	95.536	Latimeria_chalumnae
ENSRNOG00000000248	Srsf2	100	100.000	ENSMFAG00000045524	SRSF2	100	100.000	Macaca_fascicularis
ENSRNOG00000000248	Srsf2	100	94.570	ENSMMUG00000022413	SRSF2	100	94.570	Macaca_mulatta
ENSRNOG00000000248	Srsf2	100	100.000	ENSMNEG00000031444	SRSF2	100	100.000	Macaca_nemestrina
ENSRNOG00000000248	Srsf2	100	85.068	ENSMLEG00000025525	SRSF2	100	85.068	Mandrillus_leucophaeus
ENSRNOG00000000248	Srsf2	100	100.000	ENSMAUG00000022242	Srsf2	100	100.000	Mesocricetus_auratus
ENSRNOG00000000248	Srsf2	100	100.000	ENSMICG00000016956	-	100	100.000	Microcebus_murinus
ENSRNOG00000000248	Srsf2	99	98.630	ENSMODG00000001575	-	86	98.630	Monodelphis_domestica
ENSRNOG00000000248	Srsf2	100	100.000	MGP_CAROLIEiJ_G0017457	Srsf2	100	100.000	Mus_caroli
ENSRNOG00000000248	Srsf2	100	100.000	ENSMUSG00000034120	Srsf2	100	100.000	Mus_musculus
ENSRNOG00000000248	Srsf2	100	100.000	MGP_PahariEiJ_G0018587	Srsf2	100	100.000	Mus_pahari
ENSRNOG00000000248	Srsf2	100	100.000	MGP_SPRETEiJ_G0018303	Srsf2	100	100.000	Mus_spretus
ENSRNOG00000000248	Srsf2	100	100.000	ENSNGAG00000021718	Srsf2	100	100.000	Nannospalax_galili
ENSRNOG00000000248	Srsf2	50	100.000	ENSNLEG00000002547	SRSF2	51	100.000	Nomascus_leucogenys
ENSRNOG00000000248	Srsf2	100	100.000	ENSMEUG00000016745	-	100	100.000	Notamacropus_eugenii
ENSRNOG00000000248	Srsf2	100	100.000	ENSODEG00000014748	-	100	100.000	Octodon_degus
ENSRNOG00000000248	Srsf2	54	100.000	ENSOANG00000002695	-	100	100.000	Ornithorhynchus_anatinus
ENSRNOG00000000248	Srsf2	100	100.000	ENSOGAG00000028335	-	100	100.000	Otolemur_garnettii
ENSRNOG00000000248	Srsf2	99	49.545	ENSOARG00000018667	-	50	73.000	Ovis_aries
ENSRNOG00000000248	Srsf2	99	49.545	ENSOARG00000018359	-	50	73.000	Ovis_aries
ENSRNOG00000000248	Srsf2	100	100.000	ENSPPAG00000031433	SRSF2	100	100.000	Pan_paniscus
ENSRNOG00000000248	Srsf2	100	100.000	ENSPTRG00000009692	SRSF2	100	100.000	Pan_troglodytes
ENSRNOG00000000248	Srsf2	100	100.000	ENSPANG00000020023	SRSF2	100	100.000	Papio_anubis
ENSRNOG00000000248	Srsf2	100	100.000	ENSPCIG00000005334	-	100	100.000	Phascolarctos_cinereus
ENSRNOG00000000248	Srsf2	100	100.000	ENSPPYG00000008668	SRSF2	100	100.000	Pongo_abelii
ENSRNOG00000000248	Srsf2	100	100.000	ENSPCOG00000023806	-	100	100.000	Propithecus_coquereli
ENSRNOG00000000248	Srsf2	54	100.000	ENSPVAG00000014264	-	100	100.000	Pteropus_vampyrus
ENSRNOG00000000248	Srsf2	100	100.000	ENSRBIG00000034493	SRSF2	100	100.000	Rhinopithecus_bieti
ENSRNOG00000000248	Srsf2	100	100.000	ENSRROG00000042457	SRSF2	100	100.000	Rhinopithecus_roxellana
ENSRNOG00000000248	Srsf2	100	88.688	ENSSBOG00000030904	SRSF2	100	88.688	Saimiri_boliviensis_boliviensis
ENSRNOG00000000248	Srsf2	100	99.550	ENSSHAG00000005932	-	100	99.550	Sarcophilus_harrisii
ENSRNOG00000000248	Srsf2	100	93.665	ENSSPUG00000007582	-	100	93.665	Sphenodon_punctatus
ENSRNOG00000000248	Srsf2	100	99.548	ENSSSCG00000036592	-	100	99.548	Sus_scrofa
ENSRNOG00000000248	Srsf2	64	67.832	ENSSSCG00000012212	-	51	77.000	Sus_scrofa
ENSRNOG00000000248	Srsf2	100	97.738	ENSTGUG00000007799	-	100	97.738	Taeniopygia_guttata
ENSRNOG00000000248	Srsf2	100	100.000	ENSTBEG00000014339	-	100	100.000	Tupaia_belangeri
ENSRNOG00000000248	Srsf2	100	100.000	ENSUAMG00000013403	-	100	100.000	Ursus_americanus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000278	mitotic cell cycle	14657346.	IEP	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	-	ISO	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005080	protein kinase C binding	19645017.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005681	spliceosomal complex	-	IEA	Component
GO:0005681	spliceosomal complex	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0016605	PML body	-	ISO	Component
GO:0016607	nuclear speck	21873635.	IBA	Component
GO:0016607	nuclear speck	14657346.	IDA	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0033197	response to vitamin E	15247049.	IEP	Process
GO:0035061	interchromatin granule	17123510.	IDA	Component
GO:0036002	pre-mRNA binding	-	IEA	Function
GO:0036002	pre-mRNA binding	-	ISO	Function
GO:0045292	mRNA cis splicing, via spliceosome	21873635.	IBA	Process