EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000000306 (Gene tree)
Gene ID: 83537
Gene Symbol: Smpd2
Alias: lyso-PAF-PLC
Full Name: sphingomyelin phosphodiesterase 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 3229 bases
Position: chr20:46211892-46215120
Accession: 619753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000000336	Exo_endo_phos	PF03372.23	1.7e-10	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000000336	-	1666	XM_008773007	ENSRNOP00000000336	422 (aa)	XP_008771229	Q9ET64

Gene Model

Click here to download ENSRNOG00000000306's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno00600	Sphingolipid metabolism	KEGG
rno01100	Metabolic pathways	KEGG
rno04071	Sphingolipid signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000000306's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000000306	Smpd2	100	78.960	ENSG00000135587	SMPD2	100	78.960	Homo_sapiens
ENSRNOG00000000306	Smpd2	100	79.196	ENSAMEG00000016431	SMPD2	100	79.196	Ailuropoda_melanoleuca
ENSRNOG00000000306	Smpd2	92	45.721	ENSACIG00000010069	smpd2b	95	44.335	Amphilophus_citrinellus
ENSRNOG00000000306	Smpd2	94	44.068	ENSAOCG00000014544	smpd2b	93	43.584	Amphiprion_ocellaris
ENSRNOG00000000306	Smpd2	94	44.310	ENSAPEG00000023764	smpd2b	93	44.552	Amphiprion_percula
ENSRNOG00000000306	Smpd2	94	43.750	ENSATEG00000025113	smpd2b	94	42.857	Anabas_testudineus
ENSRNOG00000000306	Smpd2	72	53.795	ENSACAG00000009270	SMPD2	74	53.795	Anolis_carolinensis
ENSRNOG00000000306	Smpd2	99	78.673	ENSANAG00000028732	SMPD2	100	78.673	Aotus_nancymaae
ENSRNOG00000000306	Smpd2	92	44.853	ENSACLG00000022892	smpd2b	91	43.704	Astatotilapia_calliptera
ENSRNOG00000000306	Smpd2	98	41.898	ENSAMXG00000013614	smpd2b	99	41.898	Astyanax_mexicanus
ENSRNOG00000000306	Smpd2	100	77.541	ENSBTAG00000008145	SMPD2	69	77.541	Bos_taurus
ENSRNOG00000000306	Smpd2	93	34.906	WBGene00012105	T27F6.6	77	38.872	Caenorhabditis_elegans
ENSRNOG00000000306	Smpd2	99	78.199	ENSCJAG00000005756	SMPD2	100	78.199	Callithrix_jacchus
ENSRNOG00000000306	Smpd2	100	77.778	ENSCAFG00000003816	SMPD2	100	77.778	Canis_familiaris
ENSRNOG00000000306	Smpd2	100	77.069	ENSCHIG00000022563	SMPD2	100	77.069	Capra_hircus
ENSRNOG00000000306	Smpd2	100	76.123	ENSTSYG00000008525	SMPD2	100	76.123	Carlito_syrichta
ENSRNOG00000000306	Smpd2	81	72.384	ENSCAPG00000008057	SMPD2	97	72.384	Cavia_aperea
ENSRNOG00000000306	Smpd2	100	75.650	ENSCPOG00000003102	SMPD2	98	75.650	Cavia_porcellus
ENSRNOG00000000306	Smpd2	99	79.384	ENSCCAG00000036357	SMPD2	100	79.384	Cebus_capucinus
ENSRNOG00000000306	Smpd2	100	78.960	ENSCATG00000015266	SMPD2	100	78.960	Cercocebus_atys
ENSRNOG00000000306	Smpd2	99	71.523	ENSCLAG00000009948	SMPD2	98	72.062	Chinchilla_lanigera
ENSRNOG00000000306	Smpd2	100	78.487	ENSCSAG00000015322	SMPD2	100	78.487	Chlorocebus_sabaeus
ENSRNOG00000000306	Smpd2	76	58.750	ENSCPBG00000017837	SMPD2	78	58.750	Chrysemys_picta_bellii
ENSRNOG00000000306	Smpd2	100	78.487	ENSCANG00000029491	SMPD2	100	78.487	Colobus_angolensis_palliatus
ENSRNOG00000000306	Smpd2	97	87.990	ENSCGRG00001019999	Smpd2	97	87.990	Cricetulus_griseus_chok1gshd
ENSRNOG00000000306	Smpd2	97	87.990	ENSCGRG00000008928	Smpd2	97	87.990	Cricetulus_griseus_crigri
ENSRNOG00000000306	Smpd2	92	42.716	ENSCSEG00000016030	smpd2b	91	42.716	Cynoglossus_semilaevis
ENSRNOG00000000306	Smpd2	92	45.926	ENSCVAG00000020815	smpd2b	91	44.527	Cyprinodon_variegatus
ENSRNOG00000000306	Smpd2	93	42.893	ENSDARG00000052701	smpd2b	93	42.857	Danio_rerio
ENSRNOG00000000306	Smpd2	74	50.321	ENSDARG00000040523	smpd2a	73	50.321	Danio_rerio
ENSRNOG00000000306	Smpd2	100	75.887	ENSDNOG00000003948	SMPD2	99	75.887	Dasypus_novemcinctus
ENSRNOG00000000306	Smpd2	100	78.673	ENSDORG00000006485	Smpd2	100	78.673	Dipodomys_ordii
ENSRNOG00000000306	Smpd2	66	34.629	FBgn0035421	CG12034	64	34.828	Drosophila_melanogaster
ENSRNOG00000000306	Smpd2	92	45.261	ENSEBUG00000002962	smpd2b	77	52.108	Eptatretus_burgeri
ENSRNOG00000000306	Smpd2	100	79.433	ENSEASG00005006484	SMPD2	100	79.433	Equus_asinus_asinus
ENSRNOG00000000306	Smpd2	100	78.960	ENSECAG00000016972	SMPD2	100	78.960	Equus_caballus
ENSRNOG00000000306	Smpd2	98	43.387	ENSELUG00000021534	smpd2b	97	43.387	Esox_lucius
ENSRNOG00000000306	Smpd2	100	78.487	ENSFCAG00000006358	SMPD2	100	78.487	Felis_catus
ENSRNOG00000000306	Smpd2	76	58.567	ENSFALG00000003639	SMPD2	95	52.685	Ficedula_albicollis
ENSRNOG00000000306	Smpd2	91	47.355	ENSFHEG00000017395	smpd2b	90	46.193	Fundulus_heteroclitus
ENSRNOG00000000306	Smpd2	92	40.806	ENSGMOG00000015239	smpd2b	93	40.806	Gadus_morhua
ENSRNOG00000000306	Smpd2	76	56.698	ENSGALG00000033245	SMPD2	99	49.392	Gallus_gallus
ENSRNOG00000000306	Smpd2	91	46.617	ENSGAFG00000016345	smpd2b	90	45.202	Gambusia_affinis
ENSRNOG00000000306	Smpd2	92	45.050	ENSGACG00000005132	smpd2b	93	44.389	Gasterosteus_aculeatus
ENSRNOG00000000306	Smpd2	76	59.688	ENSGAGG00000023942	SMPD2	77	59.688	Gopherus_agassizii
ENSRNOG00000000306	Smpd2	100	79.433	ENSGGOG00000003394	SMPD2	100	79.433	Gorilla_gorilla
ENSRNOG00000000306	Smpd2	99	77.962	ENSHGLG00000000226	SMPD2	100	77.962	Heterocephalus_glaber_female
ENSRNOG00000000306	Smpd2	99	77.962	ENSHGLG00100016698	SMPD2	100	77.962	Heterocephalus_glaber_male
ENSRNOG00000000306	Smpd2	75	50.000	ENSHCOG00000001358	smpd2b	91	44.670	Hippocampus_comes
ENSRNOG00000000306	Smpd2	91	44.416	ENSIPUG00000024794	smpd2b	92	44.416	Ictalurus_punctatus
ENSRNOG00000000306	Smpd2	96	40.988	ENSIPUG00000017284	smpd2a	67	52.727	Ictalurus_punctatus
ENSRNOG00000000306	Smpd2	96	80.296	ENSSTOG00000028661	SMPD2	99	79.036	Ictidomys_tridecemlineatus
ENSRNOG00000000306	Smpd2	99	83.571	ENSJJAG00000019368	Smpd2	100	83.571	Jaculus_jaculus
ENSRNOG00000000306	Smpd2	91	46.617	ENSKMAG00000015753	smpd2b	91	45.153	Kryptolebias_marmoratus
ENSRNOG00000000306	Smpd2	91	44.192	ENSLBEG00000024878	smpd2b	90	43.511	Labrus_bergylta
ENSRNOG00000000306	Smpd2	91	45.269	ENSLACG00000016351	smpd2b	94	45.780	Latimeria_chalumnae
ENSRNOG00000000306	Smpd2	77	49.849	ENSLOCG00000009741	smpd2b	76	49.849	Lepisosteus_oculatus
ENSRNOG00000000306	Smpd2	99	72.381	ENSLAFG00000003298	SMPD2	100	72.381	Loxodonta_africana
ENSRNOG00000000306	Smpd2	100	78.960	ENSMFAG00000033236	SMPD2	100	78.960	Macaca_fascicularis
ENSRNOG00000000306	Smpd2	100	78.960	ENSMNEG00000042401	SMPD2	100	78.960	Macaca_nemestrina
ENSRNOG00000000306	Smpd2	88	77.807	ENSMLEG00000039457	SMPD2	100	77.807	Mandrillus_leucophaeus
ENSRNOG00000000306	Smpd2	92	45.122	ENSMAMG00000004710	smpd2b	91	44.226	Mastacembelus_armatus
ENSRNOG00000000306	Smpd2	92	44.853	ENSMZEG00005002958	smpd2b	91	43.704	Maylandia_zebra
ENSRNOG00000000306	Smpd2	79	54.167	ENSMGAG00000006821	SMPD2	99	48.786	Meleagris_gallopavo
ENSRNOG00000000306	Smpd2	96	88.452	ENSMAUG00000008721	Smpd2	97	88.452	Mesocricetus_auratus
ENSRNOG00000000306	Smpd2	100	78.723	ENSMICG00000014442	SMPD2	100	78.723	Microcebus_murinus
ENSRNOG00000000306	Smpd2	96	82.555	ENSMOCG00000019666	Smpd2	98	82.555	Microtus_ochrogaster
ENSRNOG00000000306	Smpd2	98	45.139	ENSMMOG00000012679	smpd2b	92	45.865	Mola_mola
ENSRNOG00000000306	Smpd2	95	54.785	ENSMODG00000017971	SMPD2	95	54.785	Monodelphis_domestica
ENSRNOG00000000306	Smpd2	99	44.470	ENSMALG00000000267	smpd2b	98	43.779	Monopterus_albus
ENSRNOG00000000306	Smpd2	99	88.544	MGP_CAROLIEiJ_G0015268	Smpd2	100	88.544	Mus_caroli
ENSRNOG00000000306	Smpd2	99	87.589	ENSMUSG00000019822	Smpd2	100	87.589	Mus_musculus
ENSRNOG00000000306	Smpd2	99	89.021	MGP_PahariEiJ_G0030686	Smpd2	100	89.021	Mus_pahari
ENSRNOG00000000306	Smpd2	99	87.112	MGP_SPRETEiJ_G0016077	Smpd2	100	87.112	Mus_spretus
ENSRNOG00000000306	Smpd2	100	76.832	ENSMPUG00000010005	SMPD2	100	76.832	Mustela_putorius_furo
ENSRNOG00000000306	Smpd2	100	78.251	ENSMLUG00000003793	SMPD2	100	78.251	Myotis_lucifugus
ENSRNOG00000000306	Smpd2	58	93.443	ENSNGAG00000013670	Smpd2	93	93.443	Nannospalax_galili
ENSRNOG00000000306	Smpd2	89	43.766	ENSNBRG00000008403	smpd2b	90	42.564	Neolamprologus_brichardi
ENSRNOG00000000306	Smpd2	100	79.433	ENSNLEG00000012570	SMPD2	100	79.433	Nomascus_leucogenys
ENSRNOG00000000306	Smpd2	93	53.165	ENSMEUG00000004602	SMPD2	94	52.897	Notamacropus_eugenii
ENSRNOG00000000306	Smpd2	96	76.790	ENSOPRG00000012612	SMPD2	96	76.790	Ochotona_princeps
ENSRNOG00000000306	Smpd2	92	45.343	ENSONIG00000014702	smpd2b	91	44.198	Oreochromis_niloticus
ENSRNOG00000000306	Smpd2	96	80.000	ENSOCUG00000008607	SMPD2	96	80.000	Oryctolagus_cuniculus
ENSRNOG00000000306	Smpd2	98	45.581	ENSORLG00000006334	smpd2b	96	44.496	Oryzias_latipes
ENSRNOG00000000306	Smpd2	98	45.581	ENSORLG00020015231	smpd2b	96	44.496	Oryzias_latipes_hni
ENSRNOG00000000306	Smpd2	98	45.581	ENSORLG00015010424	smpd2b	96	44.496	Oryzias_latipes_hsok
ENSRNOG00000000306	Smpd2	92	46.098	ENSOMEG00000016121	smpd2b	91	44.717	Oryzias_melastigma
ENSRNOG00000000306	Smpd2	100	76.596	ENSOGAG00000015505	SMPD2	100	76.123	Otolemur_garnettii
ENSRNOG00000000306	Smpd2	100	70.276	ENSOARG00000010409	SMPD2	100	70.276	Ovis_aries
ENSRNOG00000000306	Smpd2	100	78.723	ENSPPAG00000031363	SMPD2	100	78.723	Pan_paniscus
ENSRNOG00000000306	Smpd2	100	78.251	ENSPPRG00000000099	SMPD2	100	78.251	Panthera_pardus
ENSRNOG00000000306	Smpd2	100	78.251	ENSPTIG00000008954	SMPD2	100	78.251	Panthera_tigris_altaica
ENSRNOG00000000306	Smpd2	100	78.723	ENSPTRG00000018484	SMPD2	100	78.723	Pan_troglodytes
ENSRNOG00000000306	Smpd2	100	79.196	ENSPANG00000024480	SMPD2	100	79.196	Papio_anubis
ENSRNOG00000000306	Smpd2	75	48.598	ENSPKIG00000011322	smpd2a	88	42.680	Paramormyrops_kingsleyae
ENSRNOG00000000306	Smpd2	87	43.236	ENSPMGG00000000230	smpd2b	91	43.236	Periophthalmus_magnuspinnatus
ENSRNOG00000000306	Smpd2	96	85.258	ENSPEMG00000018109	Smpd2	99	85.258	Peromyscus_maniculatus_bairdii
ENSRNOG00000000306	Smpd2	74	50.633	ENSPMAG00000002460	smpd2b	90	50.316	Petromyzon_marinus
ENSRNOG00000000306	Smpd2	94	58.500	ENSPCIG00000005984	SMPD2	98	56.398	Phascolarctos_cinereus
ENSRNOG00000000306	Smpd2	91	47.619	ENSPFOG00000014164	smpd2b	90	46.212	Poecilia_formosa
ENSRNOG00000000306	Smpd2	91	47.619	ENSPLAG00000014950	smpd2b	90	46.212	Poecilia_latipinna
ENSRNOG00000000306	Smpd2	91	47.619	ENSPMEG00000002286	smpd2b	90	46.212	Poecilia_mexicana
ENSRNOG00000000306	Smpd2	91	46.867	ENSPREG00000012181	smpd2b	90	45.455	Poecilia_reticulata
ENSRNOG00000000306	Smpd2	100	78.723	ENSPPYG00000016908	-	73	78.723	Pongo_abelii
ENSRNOG00000000306	Smpd2	100	72.038	ENSPCAG00000011808	SMPD2	100	72.038	Procavia_capensis
ENSRNOG00000000306	Smpd2	100	80.142	ENSPCOG00000001714	SMPD2	100	80.142	Propithecus_coquereli
ENSRNOG00000000306	Smpd2	100	76.832	ENSPVAG00000006556	SMPD2	100	76.832	Pteropus_vampyrus
ENSRNOG00000000306	Smpd2	92	45.658	ENSPNYG00000005567	smpd2b	91	44.500	Pundamilia_nyererei
ENSRNOG00000000306	Smpd2	94	43.584	ENSPNAG00000007986	smpd2b	93	43.584	Pygocentrus_nattereri
ENSRNOG00000000306	Smpd2	100	78.960	ENSRBIG00000033388	SMPD2	100	78.960	Rhinopithecus_bieti
ENSRNOG00000000306	Smpd2	100	79.196	ENSRROG00000037705	SMPD2	100	79.196	Rhinopithecus_roxellana
ENSRNOG00000000306	Smpd2	99	78.910	ENSSBOG00000033929	SMPD2	100	78.910	Saimiri_boliviensis_boliviensis
ENSRNOG00000000306	Smpd2	76	47.988	ENSSFOG00015022890	smpd2	91	42.537	Scleropages_formosus
ENSRNOG00000000306	Smpd2	92	45.366	ENSSMAG00000008963	smpd2b	94	43.750	Scophthalmus_maximus
ENSRNOG00000000306	Smpd2	92	44.444	ENSSDUG00000000098	smpd2b	92	43.951	Seriola_dumerili
ENSRNOG00000000306	Smpd2	92	45.500	ENSSLDG00000009497	smpd2b	92	44.691	Seriola_lalandi_dorsalis
ENSRNOG00000000306	Smpd2	100	74.941	ENSSARG00000006192	SMPD2	100	74.941	Sorex_araneus
ENSRNOG00000000306	Smpd2	76	56.075	ENSSPUG00000013852	SMPD2	78	56.075	Sphenodon_punctatus
ENSRNOG00000000306	Smpd2	92	44.608	ENSSPAG00000001844	smpd2b	91	43.704	Stegastes_partitus
ENSRNOG00000000306	Smpd2	100	78.487	ENSSSCG00000004408	SMPD2	100	78.487	Sus_scrofa
ENSRNOG00000000306	Smpd2	76	56.075	ENSTGUG00000001713	SMPD2	99	49.386	Taeniopygia_guttata
ENSRNOG00000000306	Smpd2	93	45.297	ENSTRUG00000025701	smpd2b	94	44.802	Takifugu_rubripes
ENSRNOG00000000306	Smpd2	93	46.269	ENSTNIG00000018297	smpd2b	99	45.522	Tetraodon_nigroviridis
ENSRNOG00000000306	Smpd2	100	78.251	ENSTBEG00000009336	SMPD2	100	78.251	Tupaia_belangeri
ENSRNOG00000000306	Smpd2	100	74.468	ENSTTRG00000004183	SMPD2	100	74.468	Tursiops_truncatus
ENSRNOG00000000306	Smpd2	100	79.669	ENSUAMG00000018011	SMPD2	100	79.669	Ursus_americanus
ENSRNOG00000000306	Smpd2	89	77.867	ENSUMAG00000025505	SMPD2	93	77.867	Ursus_maritimus
ENSRNOG00000000306	Smpd2	81	45.906	ENSXETG00000000421	smpd2	83	45.783	Xenopus_tropicalis
ENSRNOG00000000306	Smpd2	88	45.573	ENSXCOG00000015987	smpd2b	89	44.357	Xiphophorus_couchianus
ENSRNOG00000000306	Smpd2	91	46.115	ENSXMAG00000018088	smpd2b	90	44.949	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004767	sphingomyelin phosphodiesterase activity	21873635.	IBA	Function
GO:0004767	sphingomyelin phosphodiesterase activity	10832103.	IDA	Function
GO:0004767	sphingomyelin phosphodiesterase activity	-	ISO	Function
GO:0005886	plasma membrane	-	TAS	Component
GO:0005901	caveola	21873635.	IBA	Component
GO:0005901	caveola	12473648.	IDA	Component
GO:0006684	sphingomyelin metabolic process	21873635.	IBA	Process
GO:0006685	sphingomyelin catabolic process	-	IEA	Process
GO:0006685	sphingomyelin catabolic process	-	ISO	Process
GO:0009612	response to mechanical stimulus	12473648.	IMP	Process
GO:0016020	membrane	12473648.	IDA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0035556	intracellular signal transduction	12473648.	IMP	Process
GO:0046513	ceramide biosynthetic process	12473648.	IDA	Process
GO:0046872	metal ion binding	-	IEA	Function