EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000000397 (Gene tree)
Gene ID: 361849
Gene Symbol: Ccar1
Alias: LOC361849|RGD1560358
Full Name: cell division cycle and apoptosis regulator 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 42602 bases
Position: chr20:32373443-32416044
Accession: 1560358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000059432	S1-like	PF14444.6	4.2e-32	1	1
ENSRNOP00000059432	SAP	PF02037.27	5.1e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000067004	-	4438	XM_006256462	ENSRNOP00000059432	1148 (aa)	XP_006256524	D4A2P1

Gene Model

Click here to download ENSRNOG00000000397's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000000397's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000000397	Ccar1	100	94.092	ENSG00000060339	CCAR1	100	96.491	Homo_sapiens
ENSRNOG00000000397	Ccar1	70	39.556	ENSG00000158941	CCAR2	80	43.913	Homo_sapiens
ENSRNOG00000000397	Ccar1	98	62.587	ENSAPOG00000019427	ccar1	99	61.833	Acanthochromis_polyacanthus
ENSRNOG00000000397	Ccar1	100	94.010	ENSAMEG00000018003	CCAR1	100	94.010	Ailuropoda_melanoleuca
ENSRNOG00000000397	Ccar1	98	62.885	ENSAOCG00000004413	ccar1	98	85.714	Amphiprion_ocellaris
ENSRNOG00000000397	Ccar1	98	64.900	ENSAPEG00000013204	ccar1	100	65.943	Amphiprion_percula
ENSRNOG00000000397	Ccar1	99	66.638	ENSATEG00000001698	ccar1	99	65.467	Anabas_testudineus
ENSRNOG00000000397	Ccar1	99	82.882	ENSAPLG00000013870	CCAR1	69	88.818	Anas_platyrhynchos
ENSRNOG00000000397	Ccar1	100	85.776	ENSACAG00000009927	CCAR1	100	85.863	Anolis_carolinensis
ENSRNOG00000000397	Ccar1	100	94.005	ENSANAG00000023002	CCAR1	100	94.005	Aotus_nancymaae
ENSRNOG00000000397	Ccar1	98	64.367	ENSACLG00000011175	ccar1	99	64.491	Astatotilapia_calliptera
ENSRNOG00000000397	Ccar1	98	68.250	ENSAMXG00000001383	ccar1	98	67.368	Astyanax_mexicanus
ENSRNOG00000000397	Ccar1	100	92.876	ENSBTAG00000033457	CCAR1	100	92.876	Bos_taurus
ENSRNOG00000000397	Ccar1	100	93.658	ENSCJAG00000018912	CCAR1	100	93.745	Callithrix_jacchus
ENSRNOG00000000397	Ccar1	100	94.353	ENSCAFG00000013761	CCAR1	100	94.353	Canis_familiaris
ENSRNOG00000000397	Ccar1	100	93.484	ENSCAFG00020026013	CCAR1	100	93.484	Canis_lupus_dingo
ENSRNOG00000000397	Ccar1	100	93.571	ENSCHIG00000000354	CCAR1	100	93.831	Capra_hircus
ENSRNOG00000000397	Ccar1	100	93.136	ENSTSYG00000010684	CCAR1	100	93.136	Carlito_syrichta
ENSRNOG00000000397	Ccar1	79	88.750	ENSCAPG00000016932	CCAR1	99	88.750	Cavia_aperea
ENSRNOG00000000397	Ccar1	100	93.397	ENSCPOG00000004124	CCAR1	100	93.397	Cavia_porcellus
ENSRNOG00000000397	Ccar1	100	94.005	ENSCCAG00000020659	CCAR1	100	94.005	Cebus_capucinus
ENSRNOG00000000397	Ccar1	100	93.918	ENSCATG00000042598	CCAR1	100	93.918	Cercocebus_atys
ENSRNOG00000000397	Ccar1	100	93.745	ENSCLAG00000011807	CCAR1	100	93.745	Chinchilla_lanigera
ENSRNOG00000000397	Ccar1	100	94.266	ENSCSAG00000007643	CCAR1	100	94.266	Chlorocebus_sabaeus
ENSRNOG00000000397	Ccar1	94	97.227	ENSCHOG00000002868	CCAR1	94	97.227	Choloepus_hoffmanni
ENSRNOG00000000397	Ccar1	100	88.010	ENSCPBG00000019635	CCAR1	100	87.805	Chrysemys_picta_bellii
ENSRNOG00000000397	Ccar1	100	97.307	ENSCGRG00001019471	Ccar1	100	97.307	Cricetulus_griseus_chok1gshd
ENSRNOG00000000397	Ccar1	100	97.220	ENSCGRG00000017538	Ccar1	98	97.220	Cricetulus_griseus_crigri
ENSRNOG00000000397	Ccar1	98	67.102	ENSCSEG00000006707	ccar1	99	65.885	Cynoglossus_semilaevis
ENSRNOG00000000397	Ccar1	98	64.912	ENSCVAG00000014095	ccar1	99	64.261	Cyprinodon_variegatus
ENSRNOG00000000397	Ccar1	99	64.804	ENSDARG00000074759	ccar1	99	64.417	Danio_rerio
ENSRNOG00000000397	Ccar1	100	93.658	ENSDNOG00000007499	CCAR1	100	93.658	Dasypus_novemcinctus
ENSRNOG00000000397	Ccar1	89	84.844	ENSETEG00000013025	CCAR1	89	84.844	Echinops_telfairi
ENSRNOG00000000397	Ccar1	73	61.759	ENSEBUG00000014935	ccar1	75	66.816	Eptatretus_burgeri
ENSRNOG00000000397	Ccar1	92	94.345	ENSEASG00005015474	CCAR1	95	90.722	Equus_asinus_asinus
ENSRNOG00000000397	Ccar1	100	94.353	ENSECAG00000016291	CCAR1	100	94.353	Equus_caballus
ENSRNOG00000000397	Ccar1	91	90.900	ENSEEUG00000013822	CCAR1	90	100.000	Erinaceus_europaeus
ENSRNOG00000000397	Ccar1	88	74.014	ENSELUG00000022633	ccar1	99	61.506	Esox_lucius
ENSRNOG00000000397	Ccar1	65	31.878	ENSELUG00000004179	ccar2	57	37.991	Esox_lucius
ENSRNOG00000000397	Ccar1	100	94.353	ENSFCAG00000012676	CCAR1	100	94.353	Felis_catus
ENSRNOG00000000397	Ccar1	98	86.515	ENSFALG00000013015	CCAR1	99	87.303	Ficedula_albicollis
ENSRNOG00000000397	Ccar1	100	93.918	ENSFDAG00000007880	CCAR1	100	93.918	Fukomys_damarensis
ENSRNOG00000000397	Ccar1	98	63.368	ENSFHEG00000002061	ccar1	98	62.604	Fundulus_heteroclitus
ENSRNOG00000000397	Ccar1	98	62.533	ENSGMOG00000006757	ccar1	100	61.847	Gadus_morhua
ENSRNOG00000000397	Ccar1	98	63.038	ENSGAFG00000009459	ccar1	99	62.917	Gambusia_affinis
ENSRNOG00000000397	Ccar1	99	64.731	ENSGACG00000007905	ccar1	69	72.581	Gasterosteus_aculeatus
ENSRNOG00000000397	Ccar1	100	87.924	ENSGAGG00000022022	CCAR1	100	87.718	Gopherus_agassizii
ENSRNOG00000000397	Ccar1	100	94.005	ENSGGOG00000002776	CCAR1	100	94.005	Gorilla_gorilla
ENSRNOG00000000397	Ccar1	98	64.763	ENSHBUG00000022896	ccar1	99	64.974	Haplochromis_burtoni
ENSRNOG00000000397	Ccar1	100	93.831	ENSHGLG00000012835	CCAR1	100	93.831	Heterocephalus_glaber_female
ENSRNOG00000000397	Ccar1	100	92.615	ENSHGLG00100017513	CCAR1	100	92.615	Heterocephalus_glaber_male
ENSRNOG00000000397	Ccar1	98	61.780	ENSHCOG00000004083	ccar1	97	62.348	Hippocampus_comes
ENSRNOG00000000397	Ccar1	98	65.702	ENSIPUG00000005123	ccar1	99	64.298	Ictalurus_punctatus
ENSRNOG00000000397	Ccar1	63	47.945	ENSIPUG00000006666	ccar2	70	48.611	Ictalurus_punctatus
ENSRNOG00000000397	Ccar1	100	94.092	ENSSTOG00000001539	CCAR1	100	94.092	Ictidomys_tridecemlineatus
ENSRNOG00000000397	Ccar1	100	92.094	ENSJJAG00000024055	Ccar1	100	91.659	Jaculus_jaculus
ENSRNOG00000000397	Ccar1	98	62.860	ENSKMAG00000004397	ccar1	89	73.400	Kryptolebias_marmoratus
ENSRNOG00000000397	Ccar1	76	46.916	ENSLACG00000011333	CCAR2	69	43.579	Latimeria_chalumnae
ENSRNOG00000000397	Ccar1	100	76.440	ENSLACG00000015608	CCAR1	100	77.320	Latimeria_chalumnae
ENSRNOG00000000397	Ccar1	99	65.437	ENSLOCG00000009307	ccar1	88	68.750	Lepisosteus_oculatus
ENSRNOG00000000397	Ccar1	76	39.865	ENSLOCG00000015653	-	59	41.463	Lepisosteus_oculatus
ENSRNOG00000000397	Ccar1	100	94.774	ENSLAFG00000006177	CCAR1	100	94.774	Loxodonta_africana
ENSRNOG00000000397	Ccar1	100	94.353	ENSMFAG00000035410	CCAR1	100	94.353	Macaca_fascicularis
ENSRNOG00000000397	Ccar1	100	94.353	ENSMMUG00000016652	CCAR1	100	94.353	Macaca_mulatta
ENSRNOG00000000397	Ccar1	100	93.484	ENSMNEG00000009193	CCAR1	100	93.484	Macaca_nemestrina
ENSRNOG00000000397	Ccar1	100	94.353	ENSMLEG00000033748	CCAR1	100	94.353	Mandrillus_leucophaeus
ENSRNOG00000000397	Ccar1	98	63.023	ENSMAMG00000000309	ccar1	99	62.938	Mastacembelus_armatus
ENSRNOG00000000397	Ccar1	98	64.367	ENSMZEG00005027683	ccar1	99	64.491	Maylandia_zebra
ENSRNOG00000000397	Ccar1	99	88.830	ENSMGAG00000004166	CCAR1	99	89.006	Meleagris_gallopavo
ENSRNOG00000000397	Ccar1	100	88.532	ENSMICG00000007448	CCAR1	100	88.010	Microcebus_murinus
ENSRNOG00000000397	Ccar1	100	96.959	ENSMOCG00000007793	Ccar1	100	96.959	Microtus_ochrogaster
ENSRNOG00000000397	Ccar1	98	64.891	ENSMMOG00000010483	ccar1	99	64.629	Mola_mola
ENSRNOG00000000397	Ccar1	100	89.661	ENSMODG00000017358	CCAR1	100	89.661	Monodelphis_domestica
ENSRNOG00000000397	Ccar1	99	62.533	ENSMALG00000018301	ccar1	99	62.993	Monopterus_albus
ENSRNOG00000000397	Ccar1	100	98.519	MGP_CAROLIEiJ_G0015391	Ccar1	100	98.519	Mus_caroli
ENSRNOG00000000397	Ccar1	100	98.432	ENSMUSG00000020074	Ccar1	100	100.000	Mus_musculus
ENSRNOG00000000397	Ccar1	100	98.345	MGP_PahariEiJ_G0030807	Ccar1	100	98.345	Mus_pahari
ENSRNOG00000000397	Ccar1	100	98.345	MGP_SPRETEiJ_G0016202	Ccar1	100	98.345	Mus_spretus
ENSRNOG00000000397	Ccar1	100	92.014	ENSMPUG00000004618	CCAR1	100	92.014	Mustela_putorius_furo
ENSRNOG00000000397	Ccar1	100	93.745	ENSMLUG00000001270	CCAR1	100	93.745	Myotis_lucifugus
ENSRNOG00000000397	Ccar1	100	94.787	ENSNGAG00000023517	Ccar1	100	94.787	Nannospalax_galili
ENSRNOG00000000397	Ccar1	98	65.496	ENSNBRG00000020668	ccar1	99	65.879	Neolamprologus_brichardi
ENSRNOG00000000397	Ccar1	100	94.179	ENSNLEG00000011679	CCAR1	100	94.179	Nomascus_leucogenys
ENSRNOG00000000397	Ccar1	71	100.000	ENSMEUG00000012076	-	80	100.000	Notamacropus_eugenii
ENSRNOG00000000397	Ccar1	61	41.379	ENSMEUG00000002163	CCAR2	55	42.857	Notamacropus_eugenii
ENSRNOG00000000397	Ccar1	77	97.857	ENSOPRG00000016682	CCAR1	77	97.857	Ochotona_princeps
ENSRNOG00000000397	Ccar1	76	36.511	ENSODEG00000008466	CCAR2	52	40.288	Octodon_degus
ENSRNOG00000000397	Ccar1	98	66.638	ENSONIG00000018419	ccar1	100	66.406	Oreochromis_niloticus
ENSRNOG00000000397	Ccar1	56	93.963	ENSOANG00000015048	-	92	93.827	Ornithorhynchus_anatinus
ENSRNOG00000000397	Ccar1	99	62.132	ENSORLG00020004040	ccar1	99	68.436	Oryzias_latipes_hni
ENSRNOG00000000397	Ccar1	96	67.592	ENSORLG00015009157	ccar1	96	67.771	Oryzias_latipes_hsok
ENSRNOG00000000397	Ccar1	98	63.024	ENSOMEG00000003998	ccar1	98	63.462	Oryzias_melastigma
ENSRNOG00000000397	Ccar1	100	94.353	ENSOGAG00000013294	CCAR1	100	94.353	Otolemur_garnettii
ENSRNOG00000000397	Ccar1	100	93.484	ENSOARG00000005203	CCAR1	100	93.745	Ovis_aries
ENSRNOG00000000397	Ccar1	100	86.926	ENSPPAG00000035962	CCAR1	96	96.691	Pan_paniscus
ENSRNOG00000000397	Ccar1	100	94.353	ENSPPRG00000022293	CCAR1	100	94.353	Panthera_pardus
ENSRNOG00000000397	Ccar1	100	94.353	ENSPTIG00000009648	CCAR1	100	94.353	Panthera_tigris_altaica
ENSRNOG00000000397	Ccar1	100	94.179	ENSPTRG00000002560	CCAR1	100	94.179	Pan_troglodytes
ENSRNOG00000000397	Ccar1	100	94.353	ENSPANG00000022123	CCAR1	100	94.353	Papio_anubis
ENSRNOG00000000397	Ccar1	98	66.811	ENSPKIG00000009310	ccar1	99	66.319	Paramormyrops_kingsleyae
ENSRNOG00000000397	Ccar1	76	41.907	ENSPSIG00000017945	CCAR2	65	38.266	Pelodiscus_sinensis
ENSRNOG00000000397	Ccar1	100	88.271	ENSPSIG00000005136	CCAR1	100	88.271	Pelodiscus_sinensis
ENSRNOG00000000397	Ccar1	98	65.315	ENSPMGG00000010385	ccar1	70	72.593	Periophthalmus_magnuspinnatus
ENSRNOG00000000397	Ccar1	100	96.872	ENSPEMG00000015377	-	100	96.872	Peromyscus_maniculatus_bairdii
ENSRNOG00000000397	Ccar1	69	62.022	ENSPMAG00000001814	ccar1	89	60.500	Petromyzon_marinus
ENSRNOG00000000397	Ccar1	100	90.530	ENSPCIG00000016044	CCAR1	100	90.530	Phascolarctos_cinereus
ENSRNOG00000000397	Ccar1	99	60.974	ENSPFOG00000003164	ccar1	98	62.825	Poecilia_formosa
ENSRNOG00000000397	Ccar1	98	64.665	ENSPLAG00000000212	ccar1	99	65.481	Poecilia_latipinna
ENSRNOG00000000397	Ccar1	98	65.053	ENSPMEG00000003026	ccar1	99	64.370	Poecilia_mexicana
ENSRNOG00000000397	Ccar1	98	65.009	ENSPREG00000018399	ccar1	98	64.564	Poecilia_reticulata
ENSRNOG00000000397	Ccar1	70	39.333	ENSPPYG00000018426	CCAR2	53	40.072	Pongo_abelii
ENSRNOG00000000397	Ccar1	100	94.005	ENSPPYG00000002392	CCAR1	100	94.005	Pongo_abelii
ENSRNOG00000000397	Ccar1	79	97.093	ENSPCAG00000010028	CCAR1	80	97.093	Procavia_capensis
ENSRNOG00000000397	Ccar1	88	96.866	ENSPCOG00000020489	CCAR1	99	96.866	Propithecus_coquereli
ENSRNOG00000000397	Ccar1	59	96.927	ENSPVAG00000017798	CCAR1	88	96.927	Pteropus_vampyrus
ENSRNOG00000000397	Ccar1	98	64.763	ENSPNYG00000007300	ccar1	99	64.974	Pundamilia_nyererei
ENSRNOG00000000397	Ccar1	98	67.694	ENSPNAG00000026936	ccar1	99	67.699	Pygocentrus_nattereri
ENSRNOG00000000397	Ccar1	84	94.410	ENSRBIG00000042226	CCAR1	99	94.410	Rhinopithecus_bieti
ENSRNOG00000000397	Ccar1	100	94.266	ENSRROG00000039231	CCAR1	100	94.266	Rhinopithecus_roxellana
ENSRNOG00000000397	Ccar1	99	95.462	ENSSBOG00000030420	CCAR1	99	94.299	Saimiri_boliviensis_boliviensis
ENSRNOG00000000397	Ccar1	100	90.451	ENSSHAG00000007504	CCAR1	100	90.451	Sarcophilus_harrisii
ENSRNOG00000000397	Ccar1	99	66.416	ENSSFOG00015002717	ccar1	99	65.915	Scleropages_formosus
ENSRNOG00000000397	Ccar1	98	64.561	ENSSMAG00000002119	ccar1	95	65.499	Scophthalmus_maximus
ENSRNOG00000000397	Ccar1	99	61.044	ENSSDUG00000009187	ccar1	99	62.862	Seriola_dumerili
ENSRNOG00000000397	Ccar1	99	64.863	ENSSLDG00000019960	ccar1	99	65.334	Seriola_lalandi_dorsalis
ENSRNOG00000000397	Ccar1	94	96.724	ENSSARG00000002783	CCAR1	94	96.724	Sorex_araneus
ENSRNOG00000000397	Ccar1	91	88.399	ENSSPUG00000001288	-	100	88.399	Sphenodon_punctatus
ENSRNOG00000000397	Ccar1	98	66.317	ENSSPAG00000021364	ccar1	99	66.521	Stegastes_partitus
ENSRNOG00000000397	Ccar1	100	94.092	ENSSSCG00000010243	CCAR1	100	94.092	Sus_scrofa
ENSRNOG00000000397	Ccar1	100	87.326	ENSTGUG00000003765	-	100	87.760	Taeniopygia_guttata
ENSRNOG00000000397	Ccar1	98	65.789	ENSTRUG00000013280	ccar1	98	65.351	Takifugu_rubripes
ENSRNOG00000000397	Ccar1	98	63.534	ENSTNIG00000008667	ccar1	70	72.829	Tetraodon_nigroviridis
ENSRNOG00000000397	Ccar1	66	100.000	ENSTBEG00000005800	-	66	100.000	Tupaia_belangeri
ENSRNOG00000000397	Ccar1	92	93.791	ENSTTRG00000001567	CCAR1	92	93.791	Tursiops_truncatus
ENSRNOG00000000397	Ccar1	100	93.484	ENSUAMG00000016493	CCAR1	100	93.484	Ursus_americanus
ENSRNOG00000000397	Ccar1	100	93.484	ENSUMAG00000007561	CCAR1	100	93.484	Ursus_maritimus
ENSRNOG00000000397	Ccar1	88	94.521	ENSVPAG00000011822	CCAR1	88	92.237	Vicugna_pacos
ENSRNOG00000000397	Ccar1	100	94.353	ENSVVUG00000020327	CCAR1	100	94.353	Vulpes_vulpes
ENSRNOG00000000397	Ccar1	100	71.466	ENSXETG00000008844	ccar1	100	70.862	Xenopus_tropicalis
ENSRNOG00000000397	Ccar1	98	65.157	ENSXCOG00000012603	ccar1	99	64.752	Xiphophorus_couchianus
ENSRNOG00000000397	Ccar1	98	65.274	ENSXMAG00000002765	ccar1	99	64.870	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000980	RNA polymerase II distal enhancer sequence-specific DNA binding	-	IEA	Function
GO:0000980	RNA polymerase II distal enhancer sequence-specific DNA binding	-	ISO	Function
GO:0003713	transcription coactivator activity	-	ISO	Function
GO:0003714	transcription corepressor activity	-	IEA	Function
GO:0003714	transcription corepressor activity	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006355	regulation of transcription, DNA-templated	21873635.	IBA	Process
GO:0008284	positive regulation of cell proliferation	-	IEA	Process
GO:0008284	positive regulation of cell proliferation	-	ISO	Process
GO:0030335	positive regulation of cell migration	-	IEA	Process
GO:0030335	positive regulation of cell migration	-	ISO	Process
GO:0030374	nuclear receptor transcription coactivator activity	21873635.	IBA	Function
GO:0030374	nuclear receptor transcription coactivator activity	-	ISO	Function
GO:0051301	cell division	-	IEA	Process
GO:1903507	negative regulation of nucleic acid-templated transcription	-	IEA	Process
GO:1903508	positive regulation of nucleic acid-templated transcription	-	IEA	Process