EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000000673	MMR_HSR1	PF01926.23	6.2e-06	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000000673	-	2625	XM_006256450	ENSRNOP00000000673	198 (aa)	XP_006256512	Q6AY18
ENSRNOT00000079584	-	1283	-	ENSRNOP00000069053	306 (aa)	-	A0A0G2JUD2
ENSRNOT00000000674	-	1310	-	ENSRNOP00000000674	289 (aa)	-	F7EPH4

Gene Model

Pathways

Pathway ID	Pathway Name	Source
rno00190	Oxidative phosphorylation	KEGG
rno04141	Protein processing in endoplasmic reticulum	KEGG
rno05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000000557	Ppa1	64	33.858	ENSRNOG00000021010	Arl2	73	33.858
ENSRNOG00000000557	Ppa1	91	31.522	ENSRNOG00000001689	Arl6	92	31.522
ENSRNOG00000000557	Ppa1	83	35.758	ENSRNOG00000014653	Arl11	88	35.758
ENSRNOG00000000557	Ppa1	59	38.843	ENSRNOG00000020770	Arl4d	60	38.843
ENSRNOG00000000557	Ppa1	88	32.386	ENSRNOG00000049827	Arl14	86	32.386
ENSRNOG00000000557	Ppa1	65	31.538	ENSRNOG00000045948	Arl10	66	31.538
ENSRNOG00000000557	Ppa1	73	34.868	ENSRNOG00000004282	Arl4a	76	34.868
ENSRNOG00000000557	Ppa1	100	90.404	ENSRNOG00000004820	Sar1b	100	90.404
ENSRNOG00000000557	Ppa1	51	33.000	ENSRNOG00000018714	Arl5b	85	33.000
ENSRNOG00000000557	Ppa1	67	30.075	ENSRNOG00000055860	Arl8b	72	30.075

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000287	magnesium ion binding	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0016462	pyrophosphatase activity	-	ISO	Function
GO:0000287	magnesium ion binding	-	IEA	Function
GO:0003674	molecular_function	-	ND	Function
GO:0004427	inorganic diphosphatase activity	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0005783	endoplasmic reticulum	-	ISO	Component
GO:0005794	Golgi apparatus	-	IEA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0006796	phosphate-containing compound metabolic process	21873635.	IBA	Process
GO:0006886	intracellular protein transport	-	IEA	Process
GO:0008150	biological_process	-	ND	Process
GO:0016192	vesicle-mediated transport	-	IEA	Process
GO:0016192	vesicle-mediated transport	-	ISO	Process
GO:0016529	sarcoplasmic reticulum	-	ISO	Component
GO:0030127	COPII vesicle coat	-	ISO	Component
GO:0090110	cargo loading into COPII-coated vesicle	-	ISO	Process
GO:1901301	regulation of cargo loading into COPII-coated vesicle	-	ISO	Process
GO:1901303	negative regulation of cargo loading into COPII-coated vesicle	-	ISO	Process