EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSRNOG00000000587 (Gene tree)
Gene ID
294436
Gene Symbol
Rpf2
Alias
Bxdc1|LOC294436
Full Name
ribosome production factor 2 homolog
Gene Type
protein_coding
Species
Rattus_norvegicus
Status
putative
Strand
Minus strand
Length
21544 bases
Position
chr20:45321405-45342948
Accession
1306906
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSRNOP00000000717BrixPF04427.187.2e-4411
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSRNOT00000000717-1250-ENSRNOP00000000717306 (aa)-B0BN82
Gene Model
Click here to download ENSRNOG00000000587's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000000587's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSRNOG00000000587Rpf210092.484ENSG00000197498RPF210095.794Homo_sapiens
ENSRNOG00000000587Rpf29975.082ENSAPOG00000005714rpf29975.082Acanthochromis_polyacanthus
ENSRNOG00000000587Rpf210092.157ENSAMEG00000015753RPF210092.157Ailuropoda_melanoleuca
ENSRNOG00000000587Rpf25469.512ENSACIG00000006659rpf29869.512Amphilophus_citrinellus
ENSRNOG00000000587Rpf29974.426ENSAOCG00000005173rpf29974.426Amphiprion_ocellaris
ENSRNOG00000000587Rpf29974.426ENSAPEG00000004003rpf29974.426Amphiprion_percula
ENSRNOG00000000587Rpf29973.355ENSATEG00000012818rpf29973.355Anabas_testudineus
ENSRNOG00000000587Rpf28984.249ENSAPLG00000008812RPF210084.249Anas_platyrhynchos
ENSRNOG00000000587Rpf29780.405ENSACAG00000011270RPF29680.405Anolis_carolinensis
ENSRNOG00000000587Rpf210073.203ENSANAG00000025459-9773.203Aotus_nancymaae
ENSRNOG00000000587Rpf29974.257ENSANAG00000033736-9975.248Aotus_nancymaae
ENSRNOG00000000587Rpf29969.967ENSANAG00000021067-9869.967Aotus_nancymaae
ENSRNOG00000000587Rpf210084.641ENSANAG00000034834-10084.641Aotus_nancymaae
ENSRNOG00000000587Rpf210088.562ENSANAG00000026549-10088.562Aotus_nancymaae
ENSRNOG00000000587Rpf29972.131ENSAMXG00000035201rpf29972.131Astyanax_mexicanus
ENSRNOG00000000587Rpf210093.137ENSBTAG00000016584RPF210093.137Bos_taurus
ENSRNOG00000000587Rpf29444.068WBGene00021830Y54E10A.109944.068Caenorhabditis_elegans
ENSRNOG00000000587Rpf210092.810ENSCJAG00000038330RPF210092.810Callithrix_jacchus
ENSRNOG00000000587Rpf210092.810ENSCAFG00000003918RPF210092.810Canis_familiaris
ENSRNOG00000000587Rpf210087.908ENSCHIG00000022499RPF210087.908Capra_hircus
ENSRNOG00000000587Rpf210089.542ENSTSYG00000013924RPF210089.542Carlito_syrichta
ENSRNOG00000000587Rpf29973.026ENSCAPG00000014257RPF29973.026Cavia_aperea
ENSRNOG00000000587Rpf29994.408ENSCPOG00000006797RPF29994.408Cavia_porcellus
ENSRNOG00000000587Rpf29575.172ENSCCAG00000028906-9880.687Cebus_capucinus
ENSRNOG00000000587Rpf210092.810ENSCCAG00000030864-10092.810Cebus_capucinus
ENSRNOG00000000587Rpf210090.850ENSCCAG00000030365-10090.850Cebus_capucinus
ENSRNOG00000000587Rpf29963.696ENSCCAG00000028553-9870.627Cebus_capucinus
ENSRNOG00000000587Rpf28777.122ENSCATG00000029725-9888.372Cercocebus_atys
ENSRNOG00000000587Rpf210073.856ENSCATG00000034352-10073.856Cercocebus_atys
ENSRNOG00000000587Rpf29777.076ENSCLAG00000010874-9977.741Chinchilla_lanigera
ENSRNOG00000000587Rpf210093.137ENSCLAG00000010393-9993.750Chinchilla_lanigera
ENSRNOG00000000587Rpf28967.159ENSCLAG00000013252-9967.159Chinchilla_lanigera
ENSRNOG00000000587Rpf29988.235ENSCHOG00000005865RPF29988.235Choloepus_hoffmanni
ENSRNOG00000000587Rpf29982.623ENSCPBG00000006504RPF29982.623Chrysemys_picta_bellii
ENSRNOG00000000587Rpf29359.507ENSCING00000008090-9857.947Ciona_intestinalis
ENSRNOG00000000587Rpf29359.091ENSCSAVG00000010672-9659.091Ciona_savignyi
ENSRNOG00000000587Rpf210092.484ENSCANG00000030665RPF210092.484Colobus_angolensis_palliatus
ENSRNOG00000000587Rpf29978.477ENSCGRG00001005262-9778.477Cricetulus_griseus_chok1gshd
ENSRNOG00000000587Rpf210096.078ENSCGRG00001007331-10096.078Cricetulus_griseus_chok1gshd
ENSRNOG00000000587Rpf29995.410ENSCGRG00000006083Rpf29995.410Cricetulus_griseus_crigri
ENSRNOG00000000587Rpf29872.667ENSCSEG00000015725rpf29972.667Cynoglossus_semilaevis
ENSRNOG00000000587Rpf29973.684ENSCVAG00000001072rpf29973.684Cyprinodon_variegatus
ENSRNOG00000000587Rpf29969.408ENSDARG00000043960rpf29969.408Danio_rerio
ENSRNOG00000000587Rpf26691.089ENSDNOG00000039270RPF29891.089Dasypus_novemcinctus
ENSRNOG00000000587Rpf25793.548ENSDORG00000026915Rpf210093.548Dipodomys_ordii
ENSRNOG00000000587Rpf29446.713FBgn0038585Non39346.309Drosophila_melanogaster
ENSRNOG00000000587Rpf29456.055ENSEBUG00000003640rpf28756.055Eptatretus_burgeri
ENSRNOG00000000587Rpf29790.203ENSEASG00005006927-9989.508Equus_asinus_asinus
ENSRNOG00000000587Rpf25080.921ENSEASG00005002363-9880.921Equus_asinus_asinus
ENSRNOG00000000587Rpf29794.595ENSECAG00000017121RPF29993.770Equus_caballus
ENSRNOG00000000587Rpf29776.689ENSEEUG00000006169RPF29976.689Erinaceus_europaeus
ENSRNOG00000000587Rpf29474.564ENSELUG00000018518rpf29474.564Esox_lucius
ENSRNOG00000000587Rpf210092.810ENSFCAG00000001527RPF210092.810Felis_catus
ENSRNOG00000000587Rpf210083.007ENSFALG00000010816RPF210083.007Ficedula_albicollis
ENSRNOG00000000587Rpf28874.815ENSFDAG00000016721-10074.815Fukomys_damarensis
ENSRNOG00000000587Rpf210091.503ENSFDAG00000005811-10091.503Fukomys_damarensis
ENSRNOG00000000587Rpf29972.964ENSFHEG00000011243rpf29972.964Fundulus_heteroclitus
ENSRNOG00000000587Rpf29661.616ENSGMOG00000002521rpf29961.616Gadus_morhua
ENSRNOG00000000587Rpf29982.895ENSGALG00000037087RPF29982.895Gallus_gallus
ENSRNOG00000000587Rpf29973.355ENSGAFG00000009537rpf29973.355Gambusia_affinis
ENSRNOG00000000587Rpf29972.787ENSGACG00000006507rpf29972.787Gasterosteus_aculeatus
ENSRNOG00000000587Rpf29978.361ENSGAGG00000016221RPF29978.361Gopherus_agassizii
ENSRNOG00000000587Rpf210076.797ENSGGOG00000001469RPF210076.797Gorilla_gorilla
ENSRNOG00000000587Rpf29384.965ENSGGOG00000024187-10084.965Gorilla_gorilla
ENSRNOG00000000587Rpf29972.787ENSHBUG00000021805rpf29972.787Haplochromis_burtoni
ENSRNOG00000000587Rpf210091.176ENSHGLG00000001322RPF210091.176Heterocephalus_glaber_female
ENSRNOG00000000587Rpf29286.170ENSHGLG00000012697-9886.170Heterocephalus_glaber_female
ENSRNOG00000000587Rpf29981.457ENSHGLG00000012500-8082.119Heterocephalus_glaber_female
ENSRNOG00000000587Rpf29981.126ENSHGLG00100012473-9781.788Heterocephalus_glaber_male
ENSRNOG00000000587Rpf210091.176ENSHGLG00100012131RPF210091.176Heterocephalus_glaber_male
ENSRNOG00000000587Rpf29286.170ENSHGLG00100000462-9886.170Heterocephalus_glaber_male
ENSRNOG00000000587Rpf29375.524ENSHGLG00100002981-10075.524Heterocephalus_glaber_male
ENSRNOG00000000587Rpf28975.646ENSHGLG00100009310-9977.491Heterocephalus_glaber_male
ENSRNOG00000000587Rpf29973.684ENSHCOG00000000225rpf29973.684Hippocampus_comes
ENSRNOG00000000587Rpf29465.278ENSIPUG00000016288rpf29173.822Ictalurus_punctatus
ENSRNOG00000000587Rpf29972.787ENSSTOG00000013114RPF29972.787Ictidomys_tridecemlineatus
ENSRNOG00000000587Rpf29986.557ENSJJAG00000009092Rpf210095.312Jaculus_jaculus
ENSRNOG00000000587Rpf29973.684ENSKMAG00000014609rpf29973.684Kryptolebias_marmoratus
ENSRNOG00000000587Rpf29775.676ENSLBEG00000011907rpf29667.905Labrus_bergylta
ENSRNOG00000000587Rpf29974.919ENSLACG00000003942RPF29974.919Latimeria_chalumnae
ENSRNOG00000000587Rpf29476.207ENSLOCG00000016992rpf29476.207Lepisosteus_oculatus
ENSRNOG00000000587Rpf210091.857ENSLAFG00000018219RPF210091.857Loxodonta_africana
ENSRNOG00000000587Rpf210092.484ENSMFAG00000000417RPF210092.484Macaca_fascicularis
ENSRNOG00000000587Rpf28775.735ENSMFAG00000036119-9975.735Macaca_fascicularis
ENSRNOG00000000587Rpf29974.351ENSMMUG00000042376-10074.351Macaca_mulatta
ENSRNOG00000000587Rpf210092.484ENSMMUG00000021532RPF210095.794Macaca_mulatta
ENSRNOG00000000587Rpf210077.124ENSMNEG00000031683RPF210077.124Macaca_nemestrina
ENSRNOG00000000587Rpf29976.568ENSMLEG00000042472-10076.568Mandrillus_leucophaeus
ENSRNOG00000000587Rpf29972.131ENSMAMG00000004267rpf29972.131Mastacembelus_armatus
ENSRNOG00000000587Rpf29972.787ENSMZEG00005015632rpf29972.787Maylandia_zebra
ENSRNOG00000000587Rpf29982.566ENSMGAG00000013429RPF29982.566Meleagris_gallopavo
ENSRNOG00000000587Rpf26098.214ENSMAUG00000005049Rpf210098.214Mesocricetus_auratus
ENSRNOG00000000587Rpf210091.830ENSMICG00000032086-10091.830Microcebus_murinus
ENSRNOG00000000587Rpf29976.898ENSMICG00000028979-9976.898Microcebus_murinus
ENSRNOG00000000587Rpf29782.770ENSMICG00000038169-9982.623Microcebus_murinus
ENSRNOG00000000587Rpf29996.040ENSMOCG00000005634Rpf29896.040Microtus_ochrogaster
ENSRNOG00000000587Rpf29767.003ENSMMOG00000014844rpf29867.003Mola_mola
ENSRNOG00000000587Rpf29787.879ENSMODG00000017919RPF29887.879Monodelphis_domestica
ENSRNOG00000000587Rpf29773.986ENSMALG00000019046rpf29673.986Monopterus_albus
ENSRNOG00000000587Rpf210098.039MGP_CAROLIEiJ_G0015254Rpf210098.039Mus_caroli
ENSRNOG00000000587Rpf210097.712ENSMUSG00000038510Rpf210097.802Mus_musculus
ENSRNOG00000000587Rpf210099.020MGP_PahariEiJ_G0030671Rpf210098.901Mus_pahari
ENSRNOG00000000587Rpf210097.712MGP_SPRETEiJ_G0016063Rpf29997.802Mus_spretus
ENSRNOG00000000587Rpf210093.137ENSMPUG00000010183RPF28793.137Mustela_putorius_furo
ENSRNOG00000000587Rpf28392.913ENSMLUG00000005676RPF29992.913Myotis_lucifugus
ENSRNOG00000000587Rpf210095.752ENSNGAG00000009701Rpf210095.752Nannospalax_galili
ENSRNOG00000000587Rpf29972.459ENSNBRG00000011087rpf29972.459Neolamprologus_brichardi
ENSRNOG00000000587Rpf210092.157ENSNLEG00000027819RPF210092.157Nomascus_leucogenys
ENSRNOG00000000587Rpf29284.099ENSNLEG00000033597-9084.099Nomascus_leucogenys
ENSRNOG00000000587Rpf27792.373ENSNLEG00000011848-9892.373Nomascus_leucogenys
ENSRNOG00000000587Rpf29768.456ENSMEUG00000006421RPF210068.456Notamacropus_eugenii
ENSRNOG00000000587Rpf29793.624ENSODEG00000013529-9794.257Octodon_degus
ENSRNOG00000000587Rpf29076.727ENSODEG00000003531-10076.727Octodon_degus
ENSRNOG00000000587Rpf210074.510ENSODEG00000002442-9974.510Octodon_degus
ENSRNOG00000000587Rpf29076.277ENSODEG00000006939-9976.277Octodon_degus
ENSRNOG00000000587Rpf29980.921ENSODEG00000006584-9980.921Octodon_degus
ENSRNOG00000000587Rpf29988.487ENSODEG00000019144-9988.487Octodon_degus
ENSRNOG00000000587Rpf29972.131ENSONIG00000011383rpf29972.131Oreochromis_niloticus
ENSRNOG00000000587Rpf210091.503ENSOCUG00000016028RPF210091.503Oryctolagus_cuniculus
ENSRNOG00000000587Rpf29971.475ENSORLG00000015183rpf29971.475Oryzias_latipes
ENSRNOG00000000587Rpf29971.148ENSORLG00020008756rpf29669.360Oryzias_latipes_hni
ENSRNOG00000000587Rpf29971.475ENSORLG00015003841RPF29971.475Oryzias_latipes_hsok
ENSRNOG00000000587Rpf210072.549ENSOMEG00000011508rpf29972.549Oryzias_melastigma
ENSRNOG00000000587Rpf210092.484ENSOGAG00000007438RPF210092.484Otolemur_garnettii
ENSRNOG00000000587Rpf210093.137ENSOARG00000015548-10093.137Ovis_aries
ENSRNOG00000000587Rpf210093.137ENSOARG00000009886-10093.137Ovis_aries
ENSRNOG00000000587Rpf210092.484ENSPPAG00000035622RPF210092.484Pan_paniscus
ENSRNOG00000000587Rpf29186.022ENSPPAG00000032089-9986.022Pan_paniscus
ENSRNOG00000000587Rpf29678.912ENSPPRG00000008363-9778.912Panthera_pardus
ENSRNOG00000000587Rpf210093.137ENSPPRG00000000320-10093.137Panthera_pardus
ENSRNOG00000000587Rpf210093.137ENSPTIG00000002060RPF210093.137Panthera_tigris_altaica
ENSRNOG00000000587Rpf210092.484ENSPTRG00000018503RPF210092.484Pan_troglodytes
ENSRNOG00000000587Rpf210092.484ENSPANG00000018834RPF210092.484Papio_anubis
ENSRNOG00000000587Rpf210072.876ENSPKIG00000019506rpf29972.876Paramormyrops_kingsleyae
ENSRNOG00000000587Rpf29982.410ENSPSIG00000014887RPF210082.410Pelodiscus_sinensis
ENSRNOG00000000587Rpf29288.693ENSPEMG00000011413Rpf210088.693Peromyscus_maniculatus_bairdii
ENSRNOG00000000587Rpf29787.500ENSPCIG00000028172RPF29886.230Phascolarctos_cinereus
ENSRNOG00000000587Rpf29974.013ENSPFOG00000003396rpf29974.013Poecilia_formosa
ENSRNOG00000000587Rpf29973.355ENSPLAG00000001226rpf29973.355Poecilia_latipinna
ENSRNOG00000000587Rpf29974.013ENSPMEG00000007781rpf29974.013Poecilia_mexicana
ENSRNOG00000000587Rpf29973.026ENSPREG00000020525rpf29973.026Poecilia_reticulata
ENSRNOG00000000587Rpf210092.484ENSPPYG00000016925RPF210092.484Pongo_abelii
ENSRNOG00000000587Rpf26494.872ENSPCAG00000002562RPF27994.872Procavia_capensis
ENSRNOG00000000587Rpf29976.066ENSPCOG00000012785RPF29976.144Propithecus_coquereli
ENSRNOG00000000587Rpf28093.852ENSPVAG00000003446RPF28393.676Pteropus_vampyrus
ENSRNOG00000000587Rpf29870.297ENSPNAG00000000082rpf29970.297Pygocentrus_nattereri
ENSRNOG00000000587Rpf29790.541ENSRBIG00000038389RPF210090.303Rhinopithecus_bieti
ENSRNOG00000000587Rpf210091.503ENSRROG00000036457RPF210091.503Rhinopithecus_roxellana
ENSRNOG00000000587Rpf29673.401ENSRROG00000028992-9973.401Rhinopithecus_roxellana
ENSRNOG00000000587Rpf28189.157ENSRROG00000036685-9589.157Rhinopithecus_roxellana
ENSRNOG00000000587Rpf28783.333ENSRROG00000039510-9983.333Rhinopithecus_roxellana
ENSRNOG00000000587Rpf29643.607YKR081C-8943.607Saccharomyces_cerevisiae
ENSRNOG00000000587Rpf29967.327ENSSBOG00000034420-9967.327Saimiri_boliviensis_boliviensis
ENSRNOG00000000587Rpf28272.000ENSSBOG00000030264-9272.000Saimiri_boliviensis_boliviensis
ENSRNOG00000000587Rpf28171.660ENSSBOG00000029182-9571.660Saimiri_boliviensis_boliviensis
ENSRNOG00000000587Rpf28979.779ENSSBOG00000022486-9379.779Saimiri_boliviensis_boliviensis
ENSRNOG00000000587Rpf25084.416ENSSBOG00000003975-9884.416Saimiri_boliviensis_boliviensis
ENSRNOG00000000587Rpf29773.737ENSSBOG00000025434-9973.737Saimiri_boliviensis_boliviensis
ENSRNOG00000000587Rpf29985.902ENSSHAG00000002212RPF29985.902Sarcophilus_harrisii
ENSRNOG00000000587Rpf29870.724ENSSFOG00015020916rpf29970.724Scleropages_formosus
ENSRNOG00000000587Rpf29971.803ENSSMAG00000017499rpf29971.803Scophthalmus_maximus
ENSRNOG00000000587Rpf29968.932ENSSDUG00000010383rpf29868.932Seriola_dumerili
ENSRNOG00000000587Rpf29972.459ENSSLDG00000022111rpf29972.459Seriola_lalandi_dorsalis
ENSRNOG00000000587Rpf29967.434ENSSARG00000012063RPF29967.434Sorex_araneus
ENSRNOG00000000587Rpf29978.105ENSSPUG00000005108RPF29978.105Sphenodon_punctatus
ENSRNOG00000000587Rpf29973.770ENSSPAG00000008035rpf29973.770Stegastes_partitus
ENSRNOG00000000587Rpf210092.484ENSSSCG00000004394RPF210092.484Sus_scrofa
ENSRNOG00000000587Rpf29684.746ENSTGUG00000012034RPF29684.746Taeniopygia_guttata
ENSRNOG00000000587Rpf29772.635ENSTRUG00000018264rpf29672.635Takifugu_rubripes
ENSRNOG00000000587Rpf29470.833ENSTNIG00000002749rpf29470.833Tetraodon_nigroviridis
ENSRNOG00000000587Rpf28385.039ENSTBEG00000017151RPF28385.039Tupaia_belangeri
ENSRNOG00000000587Rpf29993.770ENSTTRG00000012357RPF29993.770Tursiops_truncatus
ENSRNOG00000000587Rpf210092.810ENSUAMG00000013497RPF210092.810Ursus_americanus
ENSRNOG00000000587Rpf210092.484ENSUMAG00000025488RPF210092.484Ursus_maritimus
ENSRNOG00000000587Rpf210092.484ENSVPAG00000009562RPF210092.484Vicugna_pacos
ENSRNOG00000000587Rpf210084.641ENSVVUG00000006593-10084.641Vulpes_vulpes
ENSRNOG00000000587Rpf29280.919ENSVVUG00000021231-10080.919Vulpes_vulpes
ENSRNOG00000000587Rpf29581.724ENSXETG00000021335rpf29481.724Xenopus_tropicalis
ENSRNOG00000000587Rpf29970.395ENSXCOG00000001590rpf29970.395Xiphophorus_couchianus
ENSRNOG00000000587Rpf29965.789ENSXMAG00000021706rpf29965.789Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000027ribosomal large subunit assembly21873635.IBAProcess
GO:0000463maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)21873635.IBAProcess
GO:0005634nucleus-ISOComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0005730nucleolus-ISOComponent
GO:00080975S rRNA binding-IEAFunction
GO:00080975S rRNA binding-ISOFunction
GO:0042273ribosomal large subunit biogenesis-ISOProcess
GO:1901796regulation of signal transduction by p53 class mediator-IEAProcess
GO:1901796regulation of signal transduction by p53 class mediator-ISOProcess
GO:1902570protein localization to nucleolus-IEAProcess
GO:1902570protein localization to nucleolus-ISOProcess

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