EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000000663 (Gene tree)
Gene ID: 288718
Gene Symbol: Tfip11
Alias: LOC288718|STIP-1
Full Name: tuftelin interacting protein 11
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 12232 bases
Position: chr12:50320821-50333052
Accession: 1311449
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000000828	G-patch	PF01585.23	2.3e-16	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000000828	-	3499	-	ENSRNOP00000000828	837 (aa)	-	Q5U2Y6

Gene Model

Click here to download ENSRNOG00000000663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000000663's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000000663	Tfip11	100	92.354	ENSG00000100109	TFIP11	100	96.591	Homo_sapiens
ENSRNOG00000000663	Tfip11	100	66.745	ENSAPOG00000011350	tfip11	100	67.488	Acanthochromis_polyacanthus
ENSRNOG00000000663	Tfip11	100	91.876	ENSAMEG00000018077	TFIP11	100	91.876	Ailuropoda_melanoleuca
ENSRNOG00000000663	Tfip11	100	67.141	ENSACIG00000020016	tfip11	100	67.059	Amphilophus_citrinellus
ENSRNOG00000000663	Tfip11	100	67.458	ENSAOCG00000014412	tfip11	100	67.299	Amphiprion_ocellaris
ENSRNOG00000000663	Tfip11	100	67.458	ENSAPEG00000021837	tfip11	100	67.299	Amphiprion_percula
ENSRNOG00000000663	Tfip11	100	67.102	ENSATEG00000006472	tfip11	100	67.260	Anabas_testudineus
ENSRNOG00000000663	Tfip11	89	86.927	ENSAPLG00000012229	TFIP11	99	86.927	Anas_platyrhynchos
ENSRNOG00000000663	Tfip11	100	92.115	ENSANAG00000036330	TFIP11	100	92.115	Aotus_nancymaae
ENSRNOG00000000663	Tfip11	100	67.654	ENSACLG00000001959	tfip11	100	67.136	Astatotilapia_calliptera
ENSRNOG00000000663	Tfip11	100	65.962	ENSAMXG00000018840	tfip11	99	66.197	Astyanax_mexicanus
ENSRNOG00000000663	Tfip11	100	90.203	ENSBTAG00000012288	TFIP11	100	90.203	Bos_taurus
ENSRNOG00000000663	Tfip11	98	31.494	WBGene00007412	stip-1	99	31.264	Caenorhabditis_elegans
ENSRNOG00000000663	Tfip11	100	92.115	ENSCJAG00000008628	TFIP11	100	92.115	Callithrix_jacchus
ENSRNOG00000000663	Tfip11	100	92.354	ENSCAFG00000011741	TFIP11	100	92.354	Canis_familiaris
ENSRNOG00000000663	Tfip11	100	92.354	ENSCAFG00020022398	TFIP11	100	92.354	Canis_lupus_dingo
ENSRNOG00000000663	Tfip11	100	89.964	ENSCHIG00000017173	TFIP11	100	89.964	Capra_hircus
ENSRNOG00000000663	Tfip11	100	92.115	ENSTSYG00000011768	TFIP11	100	92.115	Carlito_syrichta
ENSRNOG00000000663	Tfip11	100	87.814	ENSCAPG00000014283	TFIP11	100	87.814	Cavia_aperea
ENSRNOG00000000663	Tfip11	100	92.593	ENSCPOG00000000358	TFIP11	100	92.593	Cavia_porcellus
ENSRNOG00000000663	Tfip11	100	91.995	ENSCCAG00000022675	TFIP11	100	91.995	Cebus_capucinus
ENSRNOG00000000663	Tfip11	100	92.234	ENSCATG00000040954	TFIP11	100	92.234	Cercocebus_atys
ENSRNOG00000000663	Tfip11	100	92.473	ENSCLAG00000007269	TFIP11	100	92.473	Chinchilla_lanigera
ENSRNOG00000000663	Tfip11	100	92.234	ENSCSAG00000010084	TFIP11	100	92.234	Chlorocebus_sabaeus
ENSRNOG00000000663	Tfip11	89	98.131	ENSCHOG00000008730	TFIP11	89	98.131	Choloepus_hoffmanni
ENSRNOG00000000663	Tfip11	100	86.022	ENSCPBG00000021598	TFIP11	100	86.022	Chrysemys_picta_bellii
ENSRNOG00000000663	Tfip11	98	42.000	ENSCING00000008698	stip	99	42.093	Ciona_intestinalis
ENSRNOG00000000663	Tfip11	98	40.767	ENSCSAVG00000002061	-	99	41.007	Ciona_savignyi
ENSRNOG00000000663	Tfip11	100	92.234	ENSCANG00000002400	TFIP11	100	92.234	Colobus_angolensis_palliatus
ENSRNOG00000000663	Tfip11	100	98.447	ENSCGRG00001013439	Tfip11	100	98.447	Cricetulus_griseus_chok1gshd
ENSRNOG00000000663	Tfip11	100	98.447	ENSCGRG00000000420	Tfip11	100	98.447	Cricetulus_griseus_crigri
ENSRNOG00000000663	Tfip11	100	66.274	ENSCSEG00000014082	tfip11	100	65.762	Cynoglossus_semilaevis
ENSRNOG00000000663	Tfip11	100	66.941	ENSCVAG00000011674	tfip11	100	67.136	Cyprinodon_variegatus
ENSRNOG00000000663	Tfip11	100	65.279	ENSDARG00000056932	tfip11	100	65.917	Danio_rerio
ENSRNOG00000000663	Tfip11	100	91.278	ENSDNOG00000042556	TFIP11	100	91.278	Dasypus_novemcinctus
ENSRNOG00000000663	Tfip11	100	92.115	ENSDORG00000006263	Tfip11	100	92.115	Dipodomys_ordii
ENSRNOG00000000663	Tfip11	98	34.368	FBgn0024191	sip1	99	35.017	Drosophila_melanogaster
ENSRNOG00000000663	Tfip11	99	54.382	ENSEBUG00000015059	tfip11	99	56.371	Eptatretus_burgeri
ENSRNOG00000000663	Tfip11	100	85.783	ENSEASG00005014285	-	100	85.783	Equus_asinus_asinus
ENSRNOG00000000663	Tfip11	100	92.712	ENSEASG00005009760	-	100	92.712	Equus_asinus_asinus
ENSRNOG00000000663	Tfip11	100	86.260	ENSECAG00000004795	-	100	86.260	Equus_caballus
ENSRNOG00000000663	Tfip11	100	92.712	ENSECAG00000016242	-	100	92.712	Equus_caballus
ENSRNOG00000000663	Tfip11	92	84.615	ENSEEUG00000015847	TFIP11	100	84.615	Erinaceus_europaeus
ENSRNOG00000000663	Tfip11	100	66.981	ENSELUG00000022017	tfip11	100	66.979	Esox_lucius
ENSRNOG00000000663	Tfip11	100	66.863	ENSELUG00000011596	TFIP11	100	66.862	Esox_lucius
ENSRNOG00000000663	Tfip11	100	92.593	ENSFCAG00000031626	TFIP11	100	92.593	Felis_catus
ENSRNOG00000000663	Tfip11	100	85.919	ENSFALG00000008481	-	100	85.919	Ficedula_albicollis
ENSRNOG00000000663	Tfip11	100	72.076	ENSFALG00000008853	-	100	72.554	Ficedula_albicollis
ENSRNOG00000000663	Tfip11	100	91.756	ENSFDAG00000016663	TFIP11	100	91.756	Fukomys_damarensis
ENSRNOG00000000663	Tfip11	100	67.882	ENSFHEG00000011548	tfip11	100	67.958	Fundulus_heteroclitus
ENSRNOG00000000663	Tfip11	100	65.687	ENSGMOG00000004834	tfip11	100	65.100	Gadus_morhua
ENSRNOG00000000663	Tfip11	100	86.277	ENSGALG00000005623	TFIP11	100	86.277	Gallus_gallus
ENSRNOG00000000663	Tfip11	100	66.430	ENSGAFG00000012142	tfip11	100	66.745	Gambusia_affinis
ENSRNOG00000000663	Tfip11	100	66.823	ENSGACG00000009599	tfip11	100	66.627	Gasterosteus_aculeatus
ENSRNOG00000000663	Tfip11	100	85.783	ENSGAGG00000008196	TFIP11	100	85.783	Gopherus_agassizii
ENSRNOG00000000663	Tfip11	100	92.354	ENSGGOG00000004999	TFIP11	100	92.354	Gorilla_gorilla
ENSRNOG00000000663	Tfip11	100	67.773	ENSHBUG00000009935	tfip11	100	67.254	Haplochromis_burtoni
ENSRNOG00000000663	Tfip11	100	92.593	ENSHGLG00000008873	TFIP11	100	92.593	Heterocephalus_glaber_female
ENSRNOG00000000663	Tfip11	100	92.593	ENSHGLG00100016817	TFIP11	100	92.593	Heterocephalus_glaber_male
ENSRNOG00000000663	Tfip11	100	65.998	ENSHCOG00000015846	tfip11	100	66.157	Hippocampus_comes
ENSRNOG00000000663	Tfip11	100	65.439	ENSIPUG00000011965	tfip11	100	65.439	Ictalurus_punctatus
ENSRNOG00000000663	Tfip11	100	85.424	ENSSTOG00000013530	TFIP11	93	98.701	Ictidomys_tridecemlineatus
ENSRNOG00000000663	Tfip11	100	66.000	ENSKMAG00000013948	tfip11	100	65.480	Kryptolebias_marmoratus
ENSRNOG00000000663	Tfip11	100	67.217	ENSLBEG00000014079	tfip11	100	67.371	Labrus_bergylta
ENSRNOG00000000663	Tfip11	100	78.069	ENSLACG00000009243	TFIP11	100	78.529	Latimeria_chalumnae
ENSRNOG00000000663	Tfip11	99	69.809	ENSLOCG00000008684	tfip11	99	69.928	Lepisosteus_oculatus
ENSRNOG00000000663	Tfip11	100	92.234	ENSMFAG00000043406	TFIP11	100	92.234	Macaca_fascicularis
ENSRNOG00000000663	Tfip11	100	92.234	ENSMMUG00000023446	TFIP11	100	92.234	Macaca_mulatta
ENSRNOG00000000663	Tfip11	92	91.332	ENSMNEG00000039522	TFIP11	100	91.977	Macaca_nemestrina
ENSRNOG00000000663	Tfip11	100	92.234	ENSMLEG00000039426	TFIP11	100	92.234	Mandrillus_leucophaeus
ENSRNOG00000000663	Tfip11	100	67.730	ENSMAMG00000013817	tfip11	100	67.765	Mastacembelus_armatus
ENSRNOG00000000663	Tfip11	100	67.654	ENSMZEG00005016814	tfip11	100	67.136	Maylandia_zebra
ENSRNOG00000000663	Tfip11	100	83.174	ENSMGAG00000006881	TFIP11	100	83.174	Meleagris_gallopavo
ENSRNOG00000000663	Tfip11	100	97.969	ENSMAUG00000016136	Tfip11	100	97.969	Mesocricetus_auratus
ENSRNOG00000000663	Tfip11	100	92.473	ENSMICG00000013732	TFIP11	100	92.473	Microcebus_murinus
ENSRNOG00000000663	Tfip11	100	98.327	ENSMOCG00000021195	Tfip11	100	98.327	Microtus_ochrogaster
ENSRNOG00000000663	Tfip11	100	65.335	ENSMMOG00000017940	tfip11	100	65.731	Mola_mola
ENSRNOG00000000663	Tfip11	100	80.406	ENSMODG00000025040	-	100	80.287	Monodelphis_domestica
ENSRNOG00000000663	Tfip11	100	88.292	ENSMODG00000010710	TFIP11	100	88.292	Monodelphis_domestica
ENSRNOG00000000663	Tfip11	100	67.734	ENSMALG00000011938	tfip11	100	67.853	Monopterus_albus
ENSRNOG00000000663	Tfip11	100	98.926	MGP_CAROLIEiJ_G0027562	Tfip11	100	100.000	Mus_caroli
ENSRNOG00000000663	Tfip11	100	99.165	ENSMUSG00000029345	Tfip11	100	100.000	Mus_musculus
ENSRNOG00000000663	Tfip11	100	99.046	MGP_PahariEiJ_G0024144	-	100	100.000	Mus_pahari
ENSRNOG00000000663	Tfip11	100	99.165	MGP_SPRETEiJ_G0028560	Tfip11	100	100.000	Mus_spretus
ENSRNOG00000000663	Tfip11	98	92.195	ENSMPUG00000013605	TFIP11	93	92.195	Mustela_putorius_furo
ENSRNOG00000000663	Tfip11	100	92.354	ENSMLUG00000008015	TFIP11	100	92.354	Myotis_lucifugus
ENSRNOG00000000663	Tfip11	100	95.579	ENSNGAG00000001168	Tfip11	100	95.579	Nannospalax_galili
ENSRNOG00000000663	Tfip11	100	67.577	ENSNBRG00000005227	tfip11	100	67.059	Neolamprologus_brichardi
ENSRNOG00000000663	Tfip11	100	91.995	ENSNLEG00000007735	TFIP11	100	91.995	Nomascus_leucogenys
ENSRNOG00000000663	Tfip11	100	88.650	ENSMEUG00000006642	TFIP11	100	88.650	Notamacropus_eugenii
ENSRNOG00000000663	Tfip11	74	93.575	ENSOPRG00000013740	TFIP11	74	93.575	Ochotona_princeps
ENSRNOG00000000663	Tfip11	100	91.766	ENSODEG00000017086	TFIP11	100	92.243	Octodon_degus
ENSRNOG00000000663	Tfip11	100	67.773	ENSONIG00000013652	tfip11	100	67.606	Oreochromis_niloticus
ENSRNOG00000000663	Tfip11	100	91.647	ENSOCUG00000006298	TFIP11	100	91.647	Oryctolagus_cuniculus
ENSRNOG00000000663	Tfip11	100	65.993	ENSORLG00000008318	tfip11	100	65.636	Oryzias_latipes
ENSRNOG00000000663	Tfip11	100	66.627	ENSORLG00020012182	tfip11	100	66.274	Oryzias_latipes_hni
ENSRNOG00000000663	Tfip11	100	66.627	ENSORLG00015001303	tfip11	100	66.274	Oryzias_latipes_hsok
ENSRNOG00000000663	Tfip11	100	65.758	ENSOMEG00000000088	tfip11	100	65.403	Oryzias_melastigma
ENSRNOG00000000663	Tfip11	100	92.115	ENSOGAG00000010584	-	100	92.115	Otolemur_garnettii
ENSRNOG00000000663	Tfip11	99	75.995	ENSOGAG00000029400	-	99	75.513	Otolemur_garnettii
ENSRNOG00000000663	Tfip11	100	88.411	ENSOARG00000001236	TFIP11	100	88.530	Ovis_aries
ENSRNOG00000000663	Tfip11	100	92.354	ENSPPAG00000037529	TFIP11	100	92.354	Pan_paniscus
ENSRNOG00000000663	Tfip11	100	92.473	ENSPPRG00000010373	TFIP11	100	92.473	Panthera_pardus
ENSRNOG00000000663	Tfip11	100	92.354	ENSPTIG00000005731	TFIP11	100	92.354	Panthera_tigris_altaica
ENSRNOG00000000663	Tfip11	100	92.354	ENSPTRG00000014196	TFIP11	100	92.354	Pan_troglodytes
ENSRNOG00000000663	Tfip11	100	92.234	ENSPANG00000018711	TFIP11	100	92.234	Papio_anubis
ENSRNOG00000000663	Tfip11	100	68.290	ENSPKIG00000024728	tfip11	100	68.639	Paramormyrops_kingsleyae
ENSRNOG00000000663	Tfip11	100	86.022	ENSPSIG00000009979	TFIP11	100	86.022	Pelodiscus_sinensis
ENSRNOG00000000663	Tfip11	100	61.466	ENSPMGG00000021616	tfip11	100	56.118	Periophthalmus_magnuspinnatus
ENSRNOG00000000663	Tfip11	100	98.447	ENSPEMG00000009979	Tfip11	100	98.447	Peromyscus_maniculatus_bairdii
ENSRNOG00000000663	Tfip11	100	57.930	ENSPMAG00000005546	tfip11	100	58.333	Petromyzon_marinus
ENSRNOG00000000663	Tfip11	100	88.411	ENSPCIG00000020963	TFIP11	100	88.411	Phascolarctos_cinereus
ENSRNOG00000000663	Tfip11	100	66.824	ENSPFOG00000016485	tfip11	100	67.099	Poecilia_formosa
ENSRNOG00000000663	Tfip11	100	66.706	ENSPLAG00000003258	tfip11	100	66.981	Poecilia_latipinna
ENSRNOG00000000663	Tfip11	100	66.903	ENSPMEG00000008257	tfip11	100	67.099	Poecilia_mexicana
ENSRNOG00000000663	Tfip11	100	67.060	ENSPREG00000001742	tfip11	100	66.981	Poecilia_reticulata
ENSRNOG00000000663	Tfip11	100	83.550	ENSPPYG00000011666	TFIP11	100	83.550	Pongo_abelii
ENSRNOG00000000663	Tfip11	93	96.346	ENSPCAG00000005912	TFIP11	93	96.346	Procavia_capensis
ENSRNOG00000000663	Tfip11	100	92.354	ENSPCOG00000027919	TFIP11	100	92.354	Propithecus_coquereli
ENSRNOG00000000663	Tfip11	100	67.536	ENSPNYG00000018025	tfip11	100	67.019	Pundamilia_nyererei
ENSRNOG00000000663	Tfip11	100	66.706	ENSPNAG00000015368	tfip11	100	66.981	Pygocentrus_nattereri
ENSRNOG00000000663	Tfip11	100	92.115	ENSRBIG00000044444	TFIP11	100	92.115	Rhinopithecus_bieti
ENSRNOG00000000663	Tfip11	100	92.115	ENSRROG00000034930	TFIP11	100	92.115	Rhinopithecus_roxellana
ENSRNOG00000000663	Tfip11	100	92.115	ENSSBOG00000035111	TFIP11	100	92.115	Saimiri_boliviensis_boliviensis
ENSRNOG00000000663	Tfip11	100	88.530	ENSSHAG00000014104	TFIP11	100	88.530	Sarcophilus_harrisii
ENSRNOG00000000663	Tfip11	100	68.720	ENSSFOG00015013856	tfip11	100	69.076	Scleropages_formosus
ENSRNOG00000000663	Tfip11	100	68.198	ENSSMAG00000011179	tfip11	100	68.353	Scophthalmus_maximus
ENSRNOG00000000663	Tfip11	100	67.529	ENSSDUG00000014159	tfip11	100	67.294	Seriola_dumerili
ENSRNOG00000000663	Tfip11	64	59.563	ENSSLDG00000001011	tfip11	99	59.199	Seriola_lalandi_dorsalis
ENSRNOG00000000663	Tfip11	83	83.811	ENSSARG00000007065	TFIP11	100	83.811	Sorex_araneus
ENSRNOG00000000663	Tfip11	92	85.007	ENSSPUG00000007618	TFIP11	98	85.007	Sphenodon_punctatus
ENSRNOG00000000663	Tfip11	100	67.376	ENSSPAG00000017719	tfip11	100	67.765	Stegastes_partitus
ENSRNOG00000000663	Tfip11	100	92.593	ENSSSCG00000009962	TFIP11	100	92.593	Sus_scrofa
ENSRNOG00000000663	Tfip11	100	84.468	ENSTGUG00000007710	TFIP11	100	84.468	Taeniopygia_guttata
ENSRNOG00000000663	Tfip11	100	63.712	ENSTRUG00000016348	tfip11	100	63.357	Takifugu_rubripes
ENSRNOG00000000663	Tfip11	100	65.721	ENSTNIG00000015914	tfip11	100	65.922	Tetraodon_nigroviridis
ENSRNOG00000000663	Tfip11	74	96.793	ENSTBEG00000007895	TFIP11	74	96.793	Tupaia_belangeri
ENSRNOG00000000663	Tfip11	68	96.656	ENSTTRG00000009421	TFIP11	68	96.656	Tursiops_truncatus
ENSRNOG00000000663	Tfip11	86	90.582	ENSUAMG00000016248	TFIP11	93	90.582	Ursus_americanus
ENSRNOG00000000663	Tfip11	100	90.800	ENSUMAG00000015595	TFIP11	100	90.800	Ursus_maritimus
ENSRNOG00000000663	Tfip11	88	88.964	ENSVVUG00000015797	TFIP11	97	88.964	Vulpes_vulpes
ENSRNOG00000000663	Tfip11	94	79.337	ENSXETG00000003784	tfip11	99	79.337	Xenopus_tropicalis
ENSRNOG00000000663	Tfip11	100	66.864	ENSXCOG00000016947	tfip11	100	67.414	Xiphophorus_couchianus
ENSRNOG00000000663	Tfip11	100	66.903	ENSXMAG00000007524	tfip11	100	67.571	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000390	spliceosomal complex disassembly	21873635.	IBA	Process
GO:0000390	spliceosomal complex disassembly	-	ISO	Process
GO:0000390	spliceosomal complex disassembly	-	ISS	Process
GO:0000784	nuclear chromosome, telomeric region	-	IEA	Component
GO:0000784	nuclear chromosome, telomeric region	-	ISO	Component
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005681	spliceosomal complex	-	ISO	Component
GO:0005681	spliceosomal complex	-	ISS	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0016607	nuclear speck	-	IEA	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0031012	extracellular matrix	-	IEA	Component
GO:0031012	extracellular matrix	-	ISO	Component
GO:0031214	biomineral tissue development	-	IEA	Process
GO:0031333	negative regulation of protein complex assembly	-	IEA	Process
GO:0031333	negative regulation of protein complex assembly	-	ISO	Process
GO:0032091	negative regulation of protein binding	-	IEA	Process
GO:0032091	negative regulation of protein binding	-	ISO	Process
GO:0071008	U2-type post-mRNA release spliceosomal complex	21873635.	IBA	Component
GO:0071008	U2-type post-mRNA release spliceosomal complex	-	ISO	Component
GO:0071008	U2-type post-mRNA release spliceosomal complex	-	ISS	Component
GO:0071013	catalytic step 2 spliceosome	-	IEA	Component
GO:0071013	catalytic step 2 spliceosome	-	ISO	Component