EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000000702 (Gene tree)
Gene ID: 304582
Gene Symbol: Sart3
Alias: LOC304582
Full Name: spliceosome associated factor 3%2C U4/U6 recycling protein
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 27819 bases
Position: chr12:48628278-48656096
Accession: 1311646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000000891	Lsm_interact	PF05391.11	2.8e-06	1	1
ENSRNOP00000000891	RRM_1	PF00076.22	6.9e-33	1	2
ENSRNOP00000000891	RRM_1	PF00076.22	6.9e-33	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000000891	-	3782	XM_006249501	ENSRNOP00000000891	960 (aa)	XP_006249563	D3ZAS8

Gene Model

Click here to download ENSRNOG00000000702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000000702's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000000702	Sart3	100	85.818	ENSG00000075856	SART3	100	95.495	Homo_sapiens
ENSRNOG00000000702	Sart3	90	62.912	ENSAPOG00000007242	sart3	96	61.269	Acanthochromis_polyacanthus
ENSRNOG00000000702	Sart3	98	86.751	ENSAMEG00000016374	SART3	100	86.749	Ailuropoda_melanoleuca
ENSRNOG00000000702	Sart3	90	64.399	ENSACIG00000016452	sart3	99	61.783	Amphilophus_citrinellus
ENSRNOG00000000702	Sart3	90	62.870	ENSAOCG00000015094	sart3	96	60.851	Amphiprion_ocellaris
ENSRNOG00000000702	Sart3	90	62.528	ENSAPEG00000023696	sart3	97	60.065	Amphiprion_percula
ENSRNOG00000000702	Sart3	90	59.502	ENSATEG00000009882	sart3	94	63.452	Anabas_testudineus
ENSRNOG00000000702	Sart3	81	70.860	ENSAPLG00000006205	SART3	97	70.860	Anas_platyrhynchos
ENSRNOG00000000702	Sart3	90	67.562	ENSACAG00000001176	SART3	90	67.778	Anolis_carolinensis
ENSRNOG00000000702	Sart3	100	85.921	ENSANAG00000025967	SART3	100	86.025	Aotus_nancymaae
ENSRNOG00000000702	Sart3	90	63.263	ENSACLG00000025832	sart3	96	61.432	Astatotilapia_calliptera
ENSRNOG00000000702	Sart3	92	60.761	ENSAMXG00000019143	sart3	92	60.797	Astyanax_mexicanus
ENSRNOG00000000702	Sart3	98	84.122	ENSBTAG00000031846	SART3	100	82.712	Bos_taurus
ENSRNOG00000000702	Sart3	100	84.146	ENSCJAG00000015330	SART3	100	84.248	Callithrix_jacchus
ENSRNOG00000000702	Sart3	100	86.232	ENSCAFG00000011352	SART3	89	86.542	Canis_familiaris
ENSRNOG00000000702	Sart3	100	86.232	ENSCAFG00020022271	SART3	100	86.542	Canis_lupus_dingo
ENSRNOG00000000702	Sart3	98	82.250	ENSCHIG00000021385	SART3	100	80.894	Capra_hircus
ENSRNOG00000000702	Sart3	98	84.989	ENSTSYG00000013923	SART3	100	84.281	Carlito_syrichta
ENSRNOG00000000702	Sart3	89	88.023	ENSCAPG00000013404	SART3	99	88.023	Cavia_aperea
ENSRNOG00000000702	Sart3	100	85.714	ENSCPOG00000010969	SART3	100	85.714	Cavia_porcellus
ENSRNOG00000000702	Sart3	100	86.232	ENSCCAG00000023667	SART3	100	86.335	Cebus_capucinus
ENSRNOG00000000702	Sart3	100	84.654	ENSCATG00000041537	SART3	100	84.756	Cercocebus_atys
ENSRNOG00000000702	Sart3	100	86.542	ENSCLAG00000011727	SART3	100	86.439	Chinchilla_lanigera
ENSRNOG00000000702	Sart3	100	86.232	ENSCSAG00000002880	SART3	100	86.335	Chlorocebus_sabaeus
ENSRNOG00000000702	Sart3	84	76.116	ENSCPBG00000006699	SART3	98	71.444	Chrysemys_picta_bellii
ENSRNOG00000000702	Sart3	90	39.644	ENSCING00000009762	-	98	39.644	Ciona_intestinalis
ENSRNOG00000000702	Sart3	100	84.553	ENSCANG00000000411	SART3	100	84.654	Colobus_angolensis_palliatus
ENSRNOG00000000702	Sart3	100	92.427	ENSCGRG00001020554	Sart3	100	92.012	Cricetulus_griseus_chok1gshd
ENSRNOG00000000702	Sart3	85	94.356	ENSCGRG00000005968	Sart3	100	94.601	Cricetulus_griseus_crigri
ENSRNOG00000000702	Sart3	60	61.329	ENSCSEG00000011951	sart3	69	61.468	Cynoglossus_semilaevis
ENSRNOG00000000702	Sart3	90	62.403	ENSCVAG00000022898	sart3	94	62.348	Cyprinodon_variegatus
ENSRNOG00000000702	Sart3	90	61.411	ENSDARG00000008032	sart3	94	61.784	Danio_rerio
ENSRNOG00000000702	Sart3	98	83.577	ENSDNOG00000019498	SART3	100	82.990	Dasypus_novemcinctus
ENSRNOG00000000702	Sart3	94	82.379	ENSDORG00000014360	Sart3	100	80.725	Dipodomys_ordii
ENSRNOG00000000702	Sart3	62	37.736	FBgn0014024	Rnp4F	53	37.975	Drosophila_melanogaster
ENSRNOG00000000702	Sart3	66	91.613	ENSETEG00000011292	SART3	78	91.613	Echinops_telfairi
ENSRNOG00000000702	Sart3	97	36.950	ENSEBUG00000005658	sart3	92	37.885	Eptatretus_burgeri
ENSRNOG00000000702	Sart3	100	85.507	ENSEASG00005014500	SART3	100	86.025	Equus_asinus_asinus
ENSRNOG00000000702	Sart3	100	85.404	ENSECAG00000000314	SART3	100	85.921	Equus_caballus
ENSRNOG00000000702	Sart3	98	77.614	ENSEEUG00000002954	SART3	100	77.329	Erinaceus_europaeus
ENSRNOG00000000702	Sart3	90	61.967	ENSELUG00000013025	sart3	97	60.526	Esox_lucius
ENSRNOG00000000702	Sart3	98	86.961	ENSFCAG00000014041	SART3	100	86.957	Felis_catus
ENSRNOG00000000702	Sart3	89	72.645	ENSFALG00000008894	SART3	100	72.645	Ficedula_albicollis
ENSRNOG00000000702	Sart3	100	85.507	ENSFDAG00000014878	SART3	100	85.404	Fukomys_damarensis
ENSRNOG00000000702	Sart3	90	60.981	ENSFHEG00000015715	sart3	94	61.148	Fundulus_heteroclitus
ENSRNOG00000000702	Sart3	90	59.732	ENSGMOG00000017859	sart3	98	59.732	Gadus_morhua
ENSRNOG00000000702	Sart3	94	72.848	ENSGALG00000039472	SART3	98	71.643	Gallus_gallus
ENSRNOG00000000702	Sart3	90	61.290	ENSGAFG00000018055	sart3	99	58.161	Gambusia_affinis
ENSRNOG00000000702	Sart3	92	60.808	ENSGACG00000008787	sart3	98	61.283	Gasterosteus_aculeatus
ENSRNOG00000000702	Sart3	90	75.338	ENSGAGG00000016519	SART3	99	71.776	Gopherus_agassizii
ENSRNOG00000000702	Sart3	100	85.699	ENSGGOG00000011562	SART3	100	85.921	Gorilla_gorilla
ENSRNOG00000000702	Sart3	90	62.971	ENSHBUG00000005247	sart3	96	61.473	Haplochromis_burtoni
ENSRNOG00000000702	Sart3	100	85.404	ENSHGLG00000011579	SART3	100	85.300	Heterocephalus_glaber_female
ENSRNOG00000000702	Sart3	100	82.816	ENSHGLG00100013263	SART3	100	82.712	Heterocephalus_glaber_male
ENSRNOG00000000702	Sart3	94	54.721	ENSHCOG00000009693	sart3	93	56.419	Hippocampus_comes
ENSRNOG00000000702	Sart3	90	61.394	ENSIPUG00000021151	sart3	94	60.994	Ictalurus_punctatus
ENSRNOG00000000702	Sart3	100	85.626	ENSSTOG00000002376	SART3	100	85.522	Ictidomys_tridecemlineatus
ENSRNOG00000000702	Sart3	99	84.969	ENSJJAG00000021869	Sart3	100	85.139	Jaculus_jaculus
ENSRNOG00000000702	Sart3	90	63.474	ENSKMAG00000016864	sart3	99	59.959	Kryptolebias_marmoratus
ENSRNOG00000000702	Sart3	90	61.659	ENSLBEG00000001263	sart3	94	61.814	Labrus_bergylta
ENSRNOG00000000702	Sart3	72	53.014	ENSLACG00000007414	SART3	94	53.053	Latimeria_chalumnae
ENSRNOG00000000702	Sart3	92	65.119	ENSLOCG00000004710	sart3	94	63.371	Lepisosteus_oculatus
ENSRNOG00000000702	Sart3	98	85.879	ENSLAFG00000007167	SART3	100	85.524	Loxodonta_africana
ENSRNOG00000000702	Sart3	100	84.654	ENSMFAG00000039887	SART3	100	84.756	Macaca_fascicularis
ENSRNOG00000000702	Sart3	100	84.654	ENSMMUG00000017124	SART3	100	84.756	Macaca_mulatta
ENSRNOG00000000702	Sart3	100	84.654	ENSMNEG00000011093	SART3	100	84.756	Macaca_nemestrina
ENSRNOG00000000702	Sart3	100	84.756	ENSMLEG00000034251	SART3	100	84.858	Mandrillus_leucophaeus
ENSRNOG00000000702	Sart3	90	62.472	ENSMAMG00000016195	sart3	94	62.597	Mastacembelus_armatus
ENSRNOG00000000702	Sart3	90	62.930	ENSMZEG00005015248	sart3	96	61.432	Maylandia_zebra
ENSRNOG00000000702	Sart3	89	73.720	ENSMGAG00000005746	SART3	100	73.948	Meleagris_gallopavo
ENSRNOG00000000702	Sart3	100	91.788	ENSMAUG00000012434	Sart3	100	91.268	Mesocricetus_auratus
ENSRNOG00000000702	Sart3	100	85.062	ENSMICG00000013052	SART3	100	85.373	Microcebus_murinus
ENSRNOG00000000702	Sart3	100	91.805	ENSMOCG00000004078	Sart3	100	91.598	Microtus_ochrogaster
ENSRNOG00000000702	Sart3	90	64.439	ENSMMOG00000017629	sart3	94	63.873	Mola_mola
ENSRNOG00000000702	Sart3	90	76.153	ENSMODG00000002859	SART3	99	71.356	Monodelphis_domestica
ENSRNOG00000000702	Sart3	90	62.500	ENSMALG00000014549	sart3	89	62.165	Monopterus_albus
ENSRNOG00000000702	Sart3	100	93.672	MGP_CAROLIEiJ_G0027580	Sart3	100	93.672	Mus_caroli
ENSRNOG00000000702	Sart3	100	92.946	ENSMUSG00000018974	Sart3	100	93.154	Mus_musculus
ENSRNOG00000000702	Sart3	100	93.438	MGP_PahariEiJ_G0024162	Sart3	100	92.917	Mus_pahari
ENSRNOG00000000702	Sart3	100	93.257	MGP_SPRETEiJ_G0028578	Sart3	100	93.361	Mus_spretus
ENSRNOG00000000702	Sart3	98	86.856	ENSMPUG00000003402	SART3	91	86.853	Mustela_putorius_furo
ENSRNOG00000000702	Sart3	100	86.023	ENSMLUG00000007906	SART3	100	85.802	Myotis_lucifugus
ENSRNOG00000000702	Sart3	99	89.905	ENSNGAG00000014773	Sart3	100	89.627	Nannospalax_galili
ENSRNOG00000000702	Sart3	90	63.152	ENSNBRG00000008526	sart3	97	61.645	Neolamprologus_brichardi
ENSRNOG00000000702	Sart3	100	84.959	ENSNLEG00000006767	SART3	100	85.061	Nomascus_leucogenys
ENSRNOG00000000702	Sart3	89	75.698	ENSMEUG00000006799	SART3	100	75.465	Notamacropus_eugenii
ENSRNOG00000000702	Sart3	100	81.593	ENSOPRG00000015817	SART3	100	82.523	Ochotona_princeps
ENSRNOG00000000702	Sart3	100	86.542	ENSODEG00000008547	SART3	100	86.439	Octodon_degus
ENSRNOG00000000702	Sart3	90	63.333	ENSONIG00000013413	sart3	96	61.925	Oreochromis_niloticus
ENSRNOG00000000702	Sart3	89	73.038	ENSOANG00000008794	SART3	100	73.038	Ornithorhynchus_anatinus
ENSRNOG00000000702	Sart3	100	85.936	ENSOCUG00000016285	SART3	100	86.039	Oryctolagus_cuniculus
ENSRNOG00000000702	Sart3	90	63.363	ENSORLG00000006895	sart3	99	60.124	Oryzias_latipes
ENSRNOG00000000702	Sart3	90	63.474	ENSORLG00020015473	sart3	99	60.227	Oryzias_latipes_hni
ENSRNOG00000000702	Sart3	90	63.004	ENSORLG00015003914	sart3	99	59.814	Oryzias_latipes_hsok
ENSRNOG00000000702	Sart3	90	63.393	ENSOMEG00000002174	sart3	94	63.058	Oryzias_melastigma
ENSRNOG00000000702	Sart3	100	85.862	ENSOGAG00000000932	SART3	100	85.655	Otolemur_garnettii
ENSRNOG00000000702	Sart3	98	82.427	ENSOARG00000018082	SART3	100	81.050	Ovis_aries
ENSRNOG00000000702	Sart3	100	84.248	ENSPPAG00000041812	SART3	100	84.350	Pan_paniscus
ENSRNOG00000000702	Sart3	98	86.856	ENSPPRG00000001579	SART3	100	86.853	Panthera_pardus
ENSRNOG00000000702	Sart3	98	86.961	ENSPTIG00000021928	SART3	100	86.957	Panthera_tigris_altaica
ENSRNOG00000000702	Sart3	100	84.146	ENSPTRG00000005404	SART3	100	84.248	Pan_troglodytes
ENSRNOG00000000702	Sart3	100	84.654	ENSPANG00000024915	SART3	100	84.756	Papio_anubis
ENSRNOG00000000702	Sart3	95	60.108	ENSPKIG00000025203	sart3	94	62.727	Paramormyrops_kingsleyae
ENSRNOG00000000702	Sart3	89	74.306	ENSPSIG00000002594	SART3	100	74.074	Pelodiscus_sinensis
ENSRNOG00000000702	Sart3	94	60.258	ENSPMGG00000018729	sart3	94	61.161	Periophthalmus_magnuspinnatus
ENSRNOG00000000702	Sart3	90	91.754	ENSPEMG00000020811	-	94	91.986	Peromyscus_maniculatus_bairdii
ENSRNOG00000000702	Sart3	90	76.398	ENSPCIG00000023889	SART3	100	72.133	Phascolarctos_cinereus
ENSRNOG00000000702	Sart3	90	62.375	ENSPFOG00000010290	sart3	94	61.615	Poecilia_formosa
ENSRNOG00000000702	Sart3	90	62.514	ENSPLAG00000002711	sart3	94	61.556	Poecilia_latipinna
ENSRNOG00000000702	Sart3	90	61.556	ENSPMEG00000000456	sart3	99	58.316	Poecilia_mexicana
ENSRNOG00000000702	Sart3	90	62.195	ENSPREG00000022086	sart3	99	58.094	Poecilia_reticulata
ENSRNOG00000000702	Sart3	100	85.921	ENSPPYG00000004919	SART3	100	86.025	Pongo_abelii
ENSRNOG00000000702	Sart3	100	76.161	ENSPCAG00000007505	SART3	100	75.439	Procavia_capensis
ENSRNOG00000000702	Sart3	100	77.202	ENSPCOG00000014016	SART3	100	77.409	Propithecus_coquereli
ENSRNOG00000000702	Sart3	100	82.298	ENSPVAG00000007442	SART3	100	82.402	Pteropus_vampyrus
ENSRNOG00000000702	Sart3	90	62.971	ENSPNYG00000015653	sart3	96	61.473	Pundamilia_nyererei
ENSRNOG00000000702	Sart3	92	60.978	ENSPNAG00000001851	sart3	94	61.351	Pygocentrus_nattereri
ENSRNOG00000000702	Sart3	100	86.232	ENSRBIG00000034143	SART3	100	86.335	Rhinopithecus_bieti
ENSRNOG00000000702	Sart3	100	86.335	ENSRROG00000003629	SART3	100	86.439	Rhinopithecus_roxellana
ENSRNOG00000000702	Sart3	100	83.023	ENSSBOG00000033093	SART3	100	83.126	Saimiri_boliviensis_boliviensis
ENSRNOG00000000702	Sart3	89	77.159	ENSSHAG00000010864	SART3	100	76.932	Sarcophilus_harrisii
ENSRNOG00000000702	Sart3	90	65.436	ENSSFOG00015004012	sart3	96	63.704	Scleropages_formosus
ENSRNOG00000000702	Sart3	90	61.427	ENSSMAG00000014666	sart3	94	61.315	Scophthalmus_maximus
ENSRNOG00000000702	Sart3	90	62.514	ENSSDUG00000011664	sart3	94	60.903	Seriola_dumerili
ENSRNOG00000000702	Sart3	90	62.115	ENSSLDG00000024990	sart3	88	62.693	Seriola_lalandi_dorsalis
ENSRNOG00000000702	Sart3	84	85.803	ENSSARG00000005401	SART3	83	86.603	Sorex_araneus
ENSRNOG00000000702	Sart3	87	73.333	ENSSPUG00000009541	SART3	99	70.423	Sphenodon_punctatus
ENSRNOG00000000702	Sart3	90	63.222	ENSSPAG00000010658	sart3	99	59.629	Stegastes_partitus
ENSRNOG00000000702	Sart3	98	85.263	ENSSSCG00000009946	SART3	99	85.389	Sus_scrofa
ENSRNOG00000000702	Sart3	90	73.732	ENSTGUG00000006905	SART3	99	73.176	Taeniopygia_guttata
ENSRNOG00000000702	Sart3	96	59.747	ENSTRUG00000014173	sart3	99	59.599	Takifugu_rubripes
ENSRNOG00000000702	Sart3	91	61.462	ENSTNIG00000015867	sart3	99	61.204	Tetraodon_nigroviridis
ENSRNOG00000000702	Sart3	91	82.653	ENSTBEG00000008888	SART3	99	81.719	Tupaia_belangeri
ENSRNOG00000000702	Sart3	98	83.841	ENSTTRG00000003993	SART3	100	82.748	Tursiops_truncatus
ENSRNOG00000000702	Sart3	98	86.540	ENSUAMG00000023906	SART3	100	86.542	Ursus_americanus
ENSRNOG00000000702	Sart3	93	88.466	ENSUMAG00000005844	SART3	98	88.647	Ursus_maritimus
ENSRNOG00000000702	Sart3	56	86.290	ENSVPAG00000009997	-	64	86.290	Vicugna_pacos
ENSRNOG00000000702	Sart3	98	86.526	ENSVVUG00000008216	SART3	100	86.542	Vulpes_vulpes
ENSRNOG00000000702	Sart3	90	65.737	ENSXETG00000017645	sart3	96	65.333	Xenopus_tropicalis
ENSRNOG00000000702	Sart3	90	62.825	ENSXCOG00000017212	sart3	99	59.015	Xiphophorus_couchianus
ENSRNOG00000000702	Sart3	90	61.889	ENSXMAG00000018160	sart3	99	58.204	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000244	spliceosomal tri-snRNP complex assembly	-	IEA	Process
GO:0000244	spliceosomal tri-snRNP complex assembly	-	ISO	Process
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000387	spliceosomal snRNP assembly	-	ISO	Process
GO:0000387	spliceosomal snRNP assembly	-	ISO	Process
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0000398	mRNA splicing, via spliceosome	-	ISO	Process
GO:0000902	cell morphogenesis	-	IEA	Process
GO:0000902	cell morphogenesis	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005691	U6atac snRNP	-	IEA	Component
GO:0005691	U6atac snRNP	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006334	nucleosome assembly	-	IEA	Process
GO:0006334	nucleosome assembly	-	ISO	Process
GO:0008150	biological_process	-	ND	Process
GO:0008380	RNA splicing	21873635.	IBA	Process
GO:0010468	regulation of gene expression	-	ISO	Process
GO:0015030	Cajal body	-	IEA	Component
GO:0015030	Cajal body	-	ISO	Component
GO:0017070	U6 snRNA binding	-	IEA	Function
GO:0017070	U6 snRNA binding	-	ISO	Function
GO:0017070	U6 snRNA binding	-	ISO	Function
GO:0030621	U4 snRNA binding	-	IEA	Function
GO:0030621	U4 snRNA binding	-	ISO	Function
GO:0030621	U4 snRNA binding	-	ISO	Function
GO:0030624	U6atac snRNA binding	-	IEA	Function
GO:0030624	U6atac snRNA binding	-	ISO	Function
GO:0042393	histone binding	-	IEA	Function
GO:0042393	histone binding	-	ISO	Function
GO:0046540	U4/U6 x U5 tri-snRNP complex	-	ISO	Component
GO:0048872	homeostasis of number of cells	-	IEA	Process
GO:0048872	homeostasis of number of cells	-	ISO	Process
GO:0061574	ASAP complex	21873635.	IBA	Component
GO:0071001	U4/U6 snRNP	-	IEA	Component
GO:0071001	U4/U6 snRNP	-	ISO	Component
GO:0071002	U4atac/U6atac snRNP	-	ISO	Component
GO:0071425	hematopoietic stem cell proliferation	-	IEA	Process
GO:0071425	hematopoietic stem cell proliferation	-	ISO	Process
GO:1903586	positive regulation of histone deubiquitination	-	IEA	Process
GO:1903586	positive regulation of histone deubiquitination	-	ISO	Process
GO:1990381	ubiquitin-specific protease binding	-	IEA	Function
GO:1990381	ubiquitin-specific protease binding	-	ISO	Function