EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000000796 (Gene tree)
Gene ID: 294429
Gene Symbol: Ranbp2
Alias: LOC294429|RGD1560047
Full Name: RAN binding protein 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 49611 bases
Position: chr20:28027054-28076664
Accession: 1560047
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001044	zf-RanBP	PF00641.18	2.9e-59	1	6
ENSRNOP00000001044	zf-RanBP	PF00641.18	2.9e-59	2	6
ENSRNOP00000001044	zf-RanBP	PF00641.18	2.9e-59	3	6
ENSRNOP00000001044	zf-RanBP	PF00641.18	2.9e-59	4	6
ENSRNOP00000001044	zf-RanBP	PF00641.18	2.9e-59	5	6
ENSRNOP00000001044	zf-RanBP	PF00641.18	2.9e-59	6	6
ENSRNOP00000063941	zf-RanBP	PF00641.18	3e-59	1	6
ENSRNOP00000063941	zf-RanBP	PF00641.18	3e-59	2	6
ENSRNOP00000063941	zf-RanBP	PF00641.18	3e-59	3	6
ENSRNOP00000063941	zf-RanBP	PF00641.18	3e-59	4	6
ENSRNOP00000063941	zf-RanBP	PF00641.18	3e-59	5	6
ENSRNOP00000063941	zf-RanBP	PF00641.18	3e-59	6	6

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000071386	-	10277	-	ENSRNOP00000063941	3088 (aa)	-	M0R3M4
ENSRNOT00000001044	-	9177	-	ENSRNOP00000001044	3059 (aa)	-	D4A054

Gene Model

Click here to download ENSRNOG00000000796's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000000796's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000000796	Ranbp2	100	86.568	ENSG00000153201	RANBP2	100	86.568	Homo_sapiens
ENSRNOG00000000796	Ranbp2	100	50.464	ENSAPOG00000017146	si:ch1073-55a19.2	100	50.795	Acanthochromis_polyacanthus
ENSRNOG00000000796	Ranbp2	99	83.185	ENSAMEG00000013078	RANBP2	100	83.185	Ailuropoda_melanoleuca
ENSRNOG00000000796	Ranbp2	100	50.120	ENSACIG00000001203	si:ch1073-55a19.2	100	50.030	Amphilophus_citrinellus
ENSRNOG00000000796	Ranbp2	100	50.477	ENSAPEG00000012495	si:ch1073-55a19.2	100	50.714	Amphiprion_percula
ENSRNOG00000000796	Ranbp2	100	50.742	ENSATEG00000001716	si:ch1073-55a19.2	100	51.243	Anabas_testudineus
ENSRNOG00000000796	Ranbp2	95	65.301	ENSACAG00000002091	RANBP2	100	64.906	Anolis_carolinensis
ENSRNOG00000000796	Ranbp2	100	85.668	ENSANAG00000023124	RANBP2	100	85.668	Aotus_nancymaae
ENSRNOG00000000796	Ranbp2	100	51.006	ENSACLG00000020500	si:ch1073-55a19.2	100	51.296	Astatotilapia_calliptera
ENSRNOG00000000796	Ranbp2	100	79.291	ENSBTAG00000000152	RANBP2	100	80.892	Bos_taurus
ENSRNOG00000000796	Ranbp2	100	85.286	ENSCJAG00000001189	RANBP2	100	85.286	Callithrix_jacchus
ENSRNOG00000000796	Ranbp2	100	79.659	ENSCAFG00000023061	RANBP2	100	80.978	Canis_familiaris
ENSRNOG00000000796	Ranbp2	100	85.910	ENSCAFG00020009314	RANBP2	100	86.072	Canis_lupus_dingo
ENSRNOG00000000796	Ranbp2	100	78.924	ENSCHIG00000012686	RANBP2	100	80.639	Capra_hircus
ENSRNOG00000000796	Ranbp2	99	85.339	ENSTSYG00000001656	RANBP2	100	85.339	Carlito_syrichta
ENSRNOG00000000796	Ranbp2	99	73.855	ENSCAPG00000010687	RANBP2	100	73.855	Cavia_aperea
ENSRNOG00000000796	Ranbp2	100	81.706	ENSCPOG00000000392	RANBP2	100	81.706	Cavia_porcellus
ENSRNOG00000000796	Ranbp2	100	85.974	ENSCCAG00000028166	RANBP2	100	85.974	Cebus_capucinus
ENSRNOG00000000796	Ranbp2	100	87.093	ENSCATG00000032597	RANBP2	100	87.093	Cercocebus_atys
ENSRNOG00000000796	Ranbp2	100	82.357	ENSCLAG00000010533	RANBP2	100	82.401	Chinchilla_lanigera
ENSRNOG00000000796	Ranbp2	100	86.915	ENSCSAG00000017019	RANBP2	100	86.915	Chlorocebus_sabaeus
ENSRNOG00000000796	Ranbp2	66	89.069	ENSCHOG00000012659	-	60	89.069	Choloepus_hoffmanni
ENSRNOG00000000796	Ranbp2	100	68.628	ENSCPBG00000006985	RANBP2	100	69.304	Chrysemys_picta_bellii
ENSRNOG00000000796	Ranbp2	97	80.057	ENSCANG00000041469	RANBP2	100	84.331	Colobus_angolensis_palliatus
ENSRNOG00000000796	Ranbp2	100	91.812	ENSCGRG00001000642	Ranbp2	100	91.812	Cricetulus_griseus_chok1gshd
ENSRNOG00000000796	Ranbp2	100	91.436	ENSCGRG00000008995	Ranbp2	100	91.743	Cricetulus_griseus_crigri
ENSRNOG00000000796	Ranbp2	100	48.705	ENSCSEG00000013280	si:ch1073-55a19.2	100	48.317	Cynoglossus_semilaevis
ENSRNOG00000000796	Ranbp2	100	51.053	ENSCVAG00000016050	si:ch1073-55a19.2	100	51.053	Cyprinodon_variegatus
ENSRNOG00000000796	Ranbp2	100	53.521	ENSDARG00000093125	RANBP2	100	48.810	Danio_rerio
ENSRNOG00000000796	Ranbp2	100	82.617	ENSDNOG00000040501	RANBP2	100	82.425	Dasypus_novemcinctus
ENSRNOG00000000796	Ranbp2	100	86.032	ENSDORG00000002206	Ranbp2	100	86.289	Dipodomys_ordii
ENSRNOG00000000796	Ranbp2	76	82.560	ENSETEG00000008891	-	69	82.345	Echinops_telfairi
ENSRNOG00000000796	Ranbp2	96	51.497	ENSEBUG00000010057	si:ch1073-55a19.2	85	57.246	Eptatretus_burgeri
ENSRNOG00000000796	Ranbp2	100	85.495	ENSEASG00005012918	RANBP2	100	85.495	Equus_asinus_asinus
ENSRNOG00000000796	Ranbp2	100	82.496	ENSECAG00000008458	RANBP2	96	84.132	Equus_caballus
ENSRNOG00000000796	Ranbp2	82	93.077	ENSEEUG00000007806	RANBP2	79	93.077	Erinaceus_europaeus
ENSRNOG00000000796	Ranbp2	99	61.779	ENSELUG00000007763	si:ch1073-55a19.2	94	59.375	Esox_lucius
ENSRNOG00000000796	Ranbp2	99	65.307	ENSFALG00000003519	RANBP2	99	64.801	Ficedula_albicollis
ENSRNOG00000000796	Ranbp2	100	81.421	ENSFDAG00000016912	RANBP2	100	81.454	Fukomys_damarensis
ENSRNOG00000000796	Ranbp2	55	49.151	ENSFHEG00000009774	si:ch1073-55a19.2	100	49.813	Fundulus_heteroclitus
ENSRNOG00000000796	Ranbp2	98	65.468	ENSGMOG00000007071	si:ch1073-55a19.2	94	66.906	Gadus_morhua
ENSRNOG00000000796	Ranbp2	61	50.582	ENSGAFG00000010966	si:ch1073-55a19.2	100	50.327	Gambusia_affinis
ENSRNOG00000000796	Ranbp2	53	47.574	ENSGACG00000006831	si:ch1073-55a19.2	100	50.613	Gasterosteus_aculeatus
ENSRNOG00000000796	Ranbp2	95	69.362	ENSGAGG00000025039	RANBP2	97	69.255	Gopherus_agassizii
ENSRNOG00000000796	Ranbp2	100	51.492	ENSHBUG00000000053	si:ch1073-55a19.2	100	51.234	Haplochromis_burtoni
ENSRNOG00000000796	Ranbp2	100	82.682	ENSHGLG00000018887	RANBP2	100	82.682	Heterocephalus_glaber_female
ENSRNOG00000000796	Ranbp2	100	81.999	ENSHGLG00100007365	RANBP2	100	81.999	Heterocephalus_glaber_male
ENSRNOG00000000796	Ranbp2	100	50.325	ENSHCOG00000019596	si:ch1073-55a19.2	100	49.745	Hippocampus_comes
ENSRNOG00000000796	Ranbp2	100	48.901	ENSIPUG00000019614	si:ch1073-55a19.2	99	52.857	Ictalurus_punctatus
ENSRNOG00000000796	Ranbp2	100	86.523	ENSSTOG00000019518	RANBP2	100	86.523	Ictidomys_tridecemlineatus
ENSRNOG00000000796	Ranbp2	100	85.006	ENSJJAG00000021292	Ranbp2	100	86.262	Jaculus_jaculus
ENSRNOG00000000796	Ranbp2	100	50.999	ENSKMAG00000001158	si:ch1073-55a19.2	100	51.076	Kryptolebias_marmoratus
ENSRNOG00000000796	Ranbp2	94	50.617	ENSLBEG00000027979	si:ch1073-55a19.2	99	54.225	Labrus_bergylta
ENSRNOG00000000796	Ranbp2	100	58.056	ENSLACG00000009728	RANBP2	100	58.222	Latimeria_chalumnae
ENSRNOG00000000796	Ranbp2	97	57.744	ENSLOCG00000010333	si:ch1073-55a19.2	100	54.877	Lepisosteus_oculatus
ENSRNOG00000000796	Ranbp2	100	84.193	ENSLAFG00000000740	RANBP2	100	84.193	Loxodonta_africana
ENSRNOG00000000796	Ranbp2	100	87.093	ENSMFAG00000029029	RANBP2	100	87.093	Macaca_fascicularis
ENSRNOG00000000796	Ranbp2	100	87.093	ENSMMUG00000021019	RANBP2	100	87.093	Macaca_mulatta
ENSRNOG00000000796	Ranbp2	100	87.093	ENSMNEG00000043706	RANBP2	100	87.093	Macaca_nemestrina
ENSRNOG00000000796	Ranbp2	99	85.373	ENSMLEG00000037350	RANBP2	99	85.373	Mandrillus_leucophaeus
ENSRNOG00000000796	Ranbp2	100	55.000	ENSMAMG00000017900	si:ch1073-55a19.2	100	50.423	Mastacembelus_armatus
ENSRNOG00000000796	Ranbp2	100	51.351	ENSMZEG00005010956	si:ch1073-55a19.2	100	51.327	Maylandia_zebra
ENSRNOG00000000796	Ranbp2	99	63.092	ENSMGAG00000014831	-	99	62.764	Meleagris_gallopavo
ENSRNOG00000000796	Ranbp2	100	92.408	ENSMAUG00000013313	Ranbp2	100	92.408	Mesocricetus_auratus
ENSRNOG00000000796	Ranbp2	100	85.917	ENSMICG00000011864	RANBP2	100	85.032	Microcebus_murinus
ENSRNOG00000000796	Ranbp2	100	91.593	ENSMOCG00000012516	Ranbp2	100	91.593	Microtus_ochrogaster
ENSRNOG00000000796	Ranbp2	98	64.615	ENSMMOG00000005743	si:ch1073-55a19.2	100	54.135	Mola_mola
ENSRNOG00000000796	Ranbp2	97	84.403	ENSMODG00000002914	RANBP2	100	84.403	Monodelphis_domestica
ENSRNOG00000000796	Ranbp2	100	50.092	ENSMALG00000004359	si:ch1073-55a19.2	100	50.527	Monopterus_albus
ENSRNOG00000000796	Ranbp2	100	94.678	ENSMUSG00000003226	Ranbp2	100	94.678	Mus_musculus
ENSRNOG00000000796	Ranbp2	100	94.744	MGP_PahariEiJ_G0030751	Ranbp2	100	94.744	Mus_pahari
ENSRNOG00000000796	Ranbp2	100	94.744	MGP_SPRETEiJ_G0016147	Ranbp2	100	94.744	Mus_spretus
ENSRNOG00000000796	Ranbp2	100	83.424	ENSMPUG00000010754	RANBP2	100	83.424	Mustela_putorius_furo
ENSRNOG00000000796	Ranbp2	99	82.351	ENSMLUG00000005555	RANBP2	100	82.351	Myotis_lucifugus
ENSRNOG00000000796	Ranbp2	100	87.911	ENSNGAG00000016154	Ranbp2	100	87.911	Nannospalax_galili
ENSRNOG00000000796	Ranbp2	100	51.159	ENSNBRG00000004587	si:ch1073-55a19.2	100	51.608	Neolamprologus_brichardi
ENSRNOG00000000796	Ranbp2	99	83.707	ENSNLEG00000007501	RANBP2	99	83.707	Nomascus_leucogenys
ENSRNOG00000000796	Ranbp2	92	87.622	ENSOPRG00000009720	-	94	87.622	Ochotona_princeps
ENSRNOG00000000796	Ranbp2	100	81.403	ENSODEG00000013212	RANBP2	100	81.499	Octodon_degus
ENSRNOG00000000796	Ranbp2	53	49.021	ENSONIG00000004346	si:ch1073-55a19.2	100	51.864	Oreochromis_niloticus
ENSRNOG00000000796	Ranbp2	80	71.020	ENSOANG00000004894	RANBP2	100	70.939	Ornithorhynchus_anatinus
ENSRNOG00000000796	Ranbp2	100	84.116	ENSOCUG00000001165	RANBP2	100	84.116	Oryctolagus_cuniculus
ENSRNOG00000000796	Ranbp2	100	49.558	ENSORLG00000015523	si:ch1073-55a19.2	100	49.602	Oryzias_latipes
ENSRNOG00000000796	Ranbp2	100	51.227	ENSORLG00020003797	si:ch1073-55a19.2	100	51.543	Oryzias_latipes_hni
ENSRNOG00000000796	Ranbp2	100	50.094	ENSORLG00015004994	si:ch1073-55a19.2	100	50.422	Oryzias_latipes_hsok
ENSRNOG00000000796	Ranbp2	100	53.237	ENSOMEG00000022969	si:ch1073-55a19.2	100	50.686	Oryzias_melastigma
ENSRNOG00000000796	Ranbp2	100	85.979	ENSOGAG00000028976	RANBP2	100	85.914	Otolemur_garnettii
ENSRNOG00000000796	Ranbp2	99	78.874	ENSOARG00000000558	RANBP2	100	80.445	Ovis_aries
ENSRNOG00000000796	Ranbp2	100	87.093	ENSPANG00000000990	RANBP2	100	87.093	Papio_anubis
ENSRNOG00000000796	Ranbp2	92	51.131	ENSPKIG00000021054	-	99	51.131	Paramormyrops_kingsleyae
ENSRNOG00000000796	Ranbp2	100	53.034	ENSPKIG00000010971	RANBP2	100	52.688	Paramormyrops_kingsleyae
ENSRNOG00000000796	Ranbp2	99	68.539	ENSPSIG00000007182	RANBP2	99	69.945	Pelodiscus_sinensis
ENSRNOG00000000796	Ranbp2	93	95.251	ENSPEMG00000021565	Ranbp2	97	95.251	Peromyscus_maniculatus_bairdii
ENSRNOG00000000796	Ranbp2	84	48.744	ENSPMAG00000007195	si:ch1073-55a19.2	100	61.314	Petromyzon_marinus
ENSRNOG00000000796	Ranbp2	100	74.442	ENSPCIG00000013912	RANBP2	100	75.462	Phascolarctos_cinereus
ENSRNOG00000000796	Ranbp2	100	49.659	ENSPFOG00000007377	si:ch1073-55a19.2	100	50.000	Poecilia_formosa
ENSRNOG00000000796	Ranbp2	55	50.220	ENSPLAG00000012373	si:ch1073-55a19.2	100	49.845	Poecilia_latipinna
ENSRNOG00000000796	Ranbp2	100	49.845	ENSPMEG00000005561	si:ch1073-55a19.2	100	49.984	Poecilia_mexicana
ENSRNOG00000000796	Ranbp2	100	50.660	ENSPREG00000013331	si:ch1073-55a19.2	100	51.282	Poecilia_reticulata
ENSRNOG00000000796	Ranbp2	72	82.360	ENSPPYG00000012139	-	100	82.360	Pongo_abelii
ENSRNOG00000000796	Ranbp2	52	86.164	ENSPPYG00000029793	-	99	86.164	Pongo_abelii
ENSRNOG00000000796	Ranbp2	95	85.804	ENSPCAG00000000957	RANBP2	98	85.804	Procavia_capensis
ENSRNOG00000000796	Ranbp2	100	82.110	ENSPCOG00000008879	RANBP2	100	82.110	Propithecus_coquereli
ENSRNOG00000000796	Ranbp2	98	84.409	ENSPVAG00000003883	RANBP2	94	84.012	Pteropus_vampyrus
ENSRNOG00000000796	Ranbp2	100	51.518	ENSPNYG00000015971	si:ch1073-55a19.2	100	51.422	Pundamilia_nyererei
ENSRNOG00000000796	Ranbp2	100	51.922	ENSPNAG00000026129	si:ch1073-55a19.2	100	52.209	Pygocentrus_nattereri
ENSRNOG00000000796	Ranbp2	100	86.923	ENSRBIG00000043515	RANBP2	100	86.923	Rhinopithecus_bieti
ENSRNOG00000000796	Ranbp2	100	85.137	ENSRROG00000026113	RANBP2	100	85.310	Rhinopithecus_roxellana
ENSRNOG00000000796	Ranbp2	100	84.426	ENSSBOG00000035336	RANBP2	100	84.426	Saimiri_boliviensis_boliviensis
ENSRNOG00000000796	Ranbp2	99	72.733	ENSSHAG00000004676	RANBP2	99	75.057	Sarcophilus_harrisii
ENSRNOG00000000796	Ranbp2	100	55.147	ENSSFOG00015023201	RANBP2	100	51.860	Scleropages_formosus
ENSRNOG00000000796	Ranbp2	99	53.972	ENSSFOG00015003943	-	99	53.646	Scleropages_formosus
ENSRNOG00000000796	Ranbp2	100	50.247	ENSSMAG00000007331	si:ch1073-55a19.2	100	50.325	Scophthalmus_maximus
ENSRNOG00000000796	Ranbp2	100	50.882	ENSSDUG00000013160	si:ch1073-55a19.2	100	51.122	Seriola_dumerili
ENSRNOG00000000796	Ranbp2	100	52.632	ENSSLDG00000023392	si:ch1073-55a19.2	100	52.632	Seriola_lalandi_dorsalis
ENSRNOG00000000796	Ranbp2	90	86.576	ENSSARG00000005595	RANBP2	77	86.576	Sorex_araneus
ENSRNOG00000000796	Ranbp2	100	50.688	ENSSPAG00000008000	si:ch1073-55a19.2	100	51.244	Stegastes_partitus
ENSRNOG00000000796	Ranbp2	100	82.090	ENSSSCG00000008136	RANBP2	98	82.107	Sus_scrofa
ENSRNOG00000000796	Ranbp2	97	66.667	ENSTGUG00000009571	RANBP2	100	66.701	Taeniopygia_guttata
ENSRNOG00000000796	Ranbp2	95	89.977	ENSTTRG00000007400	RANBP2	96	89.977	Tursiops_truncatus
ENSRNOG00000000796	Ranbp2	95	83.125	ENSUAMG00000020025	RANBP2	99	83.152	Ursus_americanus
ENSRNOG00000000796	Ranbp2	94	84.772	ENSVPAG00000006676	RANBP2	92	84.772	Vicugna_pacos
ENSRNOG00000000796	Ranbp2	100	84.997	ENSVVUG00000014899	RANBP2	100	85.371	Vulpes_vulpes
ENSRNOG00000000796	Ranbp2	94	57.153	ENSXETG00000016006	ranbp2	99	57.392	Xenopus_tropicalis
ENSRNOG00000000796	Ranbp2	99	54.023	ENSXCOG00000000752	si:ch1073-55a19.2	99	54.135	Xiphophorus_couchianus
ENSRNOG00000000796	Ranbp2	98	64.416	ENSXMAG00000003519	si:ch1073-55a19.2	100	54.135	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000413	protein peptidyl-prolyl isomerization	-	IEA	Process
GO:0001975	response to amphetamine	23711322.	IEP	Process
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	-	IEA	Function
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	-	ISO	Function
GO:0005096	GTPase activator activity	21873635.	IBA	Function
GO:0005515	protein binding	7604027.9019411.16332688.	IPI	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005635	nuclear envelope	-	ISO	Component
GO:0005642	annulate lamellae	-	IEA	Component
GO:0005642	annulate lamellae	-	ISO	Component
GO:0005643	nuclear pore	21873635.	IBA	Component
GO:0005643	nuclear pore	9398662.	IDA	Component
GO:0005643	nuclear pore	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005739	mitochondrion	-	IEA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0006111	regulation of gluconeogenesis	-	IEA	Process
GO:0006111	regulation of gluconeogenesis	-	ISO	Process
GO:0006457	protein folding	-	IEA	Process
GO:0006607	NLS-bearing protein import into nucleus	21873635.	IBA	Process
GO:0006607	NLS-bearing protein import into nucleus	-	ISO	Process
GO:0008536	Ran GTPase binding	21873635.	IBA	Function
GO:0008536	Ran GTPase binding	-	ISO	Function
GO:0016018	cyclosporin A binding	-	ISO	Function
GO:0016925	protein sumoylation	-	IEA	Process
GO:0016925	protein sumoylation	-	ISO	Process
GO:0019789	SUMO transferase activity	-	ISO	Function
GO:0031965	nuclear membrane	-	IEA	Component
GO:0031965	nuclear membrane	-	ISO	Component
GO:0033133	positive regulation of glucokinase activity	-	IEA	Process
GO:0033133	positive regulation of glucokinase activity	-	ISO	Process
GO:0042405	nuclear inclusion body	-	IEA	Component
GO:0042405	nuclear inclusion body	-	ISO	Component
GO:0043547	positive regulation of GTPase activity	-	IEA	Process
GO:0044614	nuclear pore cytoplasmic filaments	7775481.	IDA	Component
GO:0044614	nuclear pore cytoplasmic filaments	-	ISO	Component
GO:0044615	nuclear pore nuclear basket	-	IEA	Component
GO:0044615	nuclear pore nuclear basket	-	ISO	Component
GO:0044877	protein-containing complex binding	9398662.	IPI	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0051642	centrosome localization	-	IEA	Process
GO:0051642	centrosome localization	-	ISO	Process
GO:1990723	cytoplasmic periphery of the nuclear pore complex	7775481.	IDA	Component