EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000000804 (Gene tree)
Gene ID: 294230
Gene Symbol: Mrps18b
Alias: Ptd017
Full Name: mitochondrial ribosomal protein S18B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 6058 bases
Position: chr20:3344870-3350927
Accession: 1302998
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001058	Ribosomal_S18	PF01084.20	8e-16	1	1
ENSRNOP00000070318	Ribosomal_S18	PF01084.20	1e-13	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000081673	-	700	-	-	- (aa)	-	-
ENSRNOT00000091461	-	701	-	-	- (aa)	-	-
ENSRNOT00000089978	-	450	-	ENSRNOP00000070318	150 (aa)	-	A0A0G2JXL3
ENSRNOT00000081904	-	763	-	-	- (aa)	-	-
ENSRNOT00000001058	-	1062	-	ENSRNOP00000001058	257 (aa)	-	F6Q5K7
ENSRNOT00000087613	-	734	-	ENSRNOP00000069189	91 (aa)	-	A0A0G2JUQ9

Gene Model

Click here to download ENSRNOG00000000804's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000000804's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000000804	Mrps18b	98	78.210	ENSG00000204568	MRPS18B	99	78.210	Homo_sapiens
ENSRNOG00000000804	Mrps18b	87	42.949	ENSAPOG00000003719	mrps18b	81	47.236	Acanthochromis_polyacanthus
ENSRNOG00000000804	Mrps18b	98	79.377	ENSAMEG00000013279	MRPS18B	99	79.377	Ailuropoda_melanoleuca
ENSRNOG00000000804	Mrps18b	99	40.625	ENSACIG00000013156	mrps18b	99	45.306	Amphilophus_citrinellus
ENSRNOG00000000804	Mrps18b	72	48.855	ENSAOCG00000008569	mrps18b	71	52.299	Amphiprion_ocellaris
ENSRNOG00000000804	Mrps18b	72	48.855	ENSAPEG00000008204	mrps18b	71	52.299	Amphiprion_percula
ENSRNOG00000000804	Mrps18b	84	44.292	ENSATEG00000012949	mrps18b	88	44.292	Anabas_testudineus
ENSRNOG00000000804	Mrps18b	89	47.239	ENSACAG00000010755	MRPS18B	99	55.450	Anolis_carolinensis
ENSRNOG00000000804	Mrps18b	92	79.916	ENSANAG00000021210	MRPS18B	99	78.599	Aotus_nancymaae
ENSRNOG00000000804	Mrps18b	58	45.695	ENSACLG00000004576	-	74	45.695	Astatotilapia_calliptera
ENSRNOG00000000804	Mrps18b	87	43.590	ENSACLG00000015409	mrps18b	81	48.241	Astatotilapia_calliptera
ENSRNOG00000000804	Mrps18b	80	45.631	ENSAMXG00000034123	mrps18b	72	51.412	Astyanax_mexicanus
ENSRNOG00000000804	Mrps18b	98	79.767	ENSBTAG00000006936	MRPS18B	99	79.767	Bos_taurus
ENSRNOG00000000804	Mrps18b	98	76.654	ENSCJAG00000019949	MRPS18B	99	76.654	Callithrix_jacchus
ENSRNOG00000000804	Mrps18b	98	77.734	ENSCAFG00000000411	MRPS18B	99	77.734	Canis_familiaris
ENSRNOG00000000804	Mrps18b	98	77.734	ENSCAFG00020017573	MRPS18B	99	77.734	Canis_lupus_dingo
ENSRNOG00000000804	Mrps18b	98	78.988	ENSCHIG00000021770	MRPS18B	99	78.988	Capra_hircus
ENSRNOG00000000804	Mrps18b	97	80.556	ENSTSYG00000003333	MRPS18B	99	80.556	Carlito_syrichta
ENSRNOG00000000804	Mrps18b	95	77.419	ENSCAPG00000000098	MRPS18B	98	77.419	Cavia_aperea
ENSRNOG00000000804	Mrps18b	95	77.419	ENSCPOG00000015405	MRPS18B	96	77.419	Cavia_porcellus
ENSRNOG00000000804	Mrps18b	98	78.988	ENSCCAG00000037423	MRPS18B	99	78.988	Cebus_capucinus
ENSRNOG00000000804	Mrps18b	98	77.821	ENSCATG00000040250	MRPS18B	99	77.821	Cercocebus_atys
ENSRNOG00000000804	Mrps18b	95	80.162	ENSCLAG00000003282	MRPS18B	98	80.162	Chinchilla_lanigera
ENSRNOG00000000804	Mrps18b	98	77.821	ENSCSAG00000018793	-	99	77.821	Chlorocebus_sabaeus
ENSRNOG00000000804	Mrps18b	98	74.219	ENSCHOG00000005581	MRPS18B	99	74.219	Choloepus_hoffmanni
ENSRNOG00000000804	Mrps18b	71	63.736	ENSCPBG00000018833	MRPS18B	85	56.696	Chrysemys_picta_bellii
ENSRNOG00000000804	Mrps18b	58	30.631	ENSCING00000014510	-	51	37.405	Ciona_intestinalis
ENSRNOG00000000804	Mrps18b	98	77.432	ENSCANG00000043568	MRPS18B	99	77.432	Colobus_angolensis_palliatus
ENSRNOG00000000804	Mrps18b	98	87.402	ENSCGRG00001018086	Mrps18b	100	86.614	Cricetulus_griseus_chok1gshd
ENSRNOG00000000804	Mrps18b	98	87.402	ENSCGRG00000013676	Mrps18b	100	86.614	Cricetulus_griseus_crigri
ENSRNOG00000000804	Mrps18b	95	37.952	ENSCSEG00000018717	mrps18b	99	41.322	Cynoglossus_semilaevis
ENSRNOG00000000804	Mrps18b	79	46.099	ENSCVAG00000004836	mrps18b	73	51.087	Cyprinodon_variegatus
ENSRNOG00000000804	Mrps18b	92	41.975	ENSDARG00000007065	mrps18b	84	49.510	Danio_rerio
ENSRNOG00000000804	Mrps18b	91	75.630	ENSDNOG00000032393	MRPS18B	94	74.400	Dasypus_novemcinctus
ENSRNOG00000000804	Mrps18b	71	38.168	FBgn0032849	mRpS18B	62	48.092	Drosophila_melanogaster
ENSRNOG00000000804	Mrps18b	98	67.704	ENSETEG00000003113	MRPS18B	99	65.625	Echinops_telfairi
ENSRNOG00000000804	Mrps18b	93	38.824	ENSEBUG00000003724	mrps18b	86	41.202	Eptatretus_burgeri
ENSRNOG00000000804	Mrps18b	98	79.767	ENSEASG00005018922	MRPS18B	99	79.767	Equus_asinus_asinus
ENSRNOG00000000804	Mrps18b	98	78.988	ENSECAG00000022485	MRPS18B	99	78.988	Equus_caballus
ENSRNOG00000000804	Mrps18b	95	75.610	ENSEEUG00000010352	MRPS18B	99	75.097	Erinaceus_europaeus
ENSRNOG00000000804	Mrps18b	98	40.000	ENSELUG00000023727	mrps18b	86	45.833	Esox_lucius
ENSRNOG00000000804	Mrps18b	92	79.916	ENSFCAG00000007686	MRPS18B	99	78.210	Felis_catus
ENSRNOG00000000804	Mrps18b	92	78.661	ENSFDAG00000012231	MRPS18B	94	79.039	Fukomys_damarensis
ENSRNOG00000000804	Mrps18b	68	52.299	ENSFHEG00000017861	mrps18b	70	52.299	Fundulus_heteroclitus
ENSRNOG00000000804	Mrps18b	84	44.966	ENSGMOG00000013271	mrps18b	100	50.521	Gadus_morhua
ENSRNOG00000000804	Mrps18b	59	52.252	ENSGAFG00000009051	mrps18b	52	63.964	Gambusia_affinis
ENSRNOG00000000804	Mrps18b	99	42.473	ENSGACG00000001379	mrps18b	98	46.862	Gasterosteus_aculeatus
ENSRNOG00000000804	Mrps18b	98	70.428	ENSGGOG00000011317	MRPS18B	99	70.428	Gorilla_gorilla
ENSRNOG00000000804	Mrps18b	87	43.590	ENSHBUG00000008445	mrps18b	81	48.241	Haplochromis_burtoni
ENSRNOG00000000804	Mrps18b	57	48.148	ENSHBUG00000010723	-	51	57.009	Haplochromis_burtoni
ENSRNOG00000000804	Mrps18b	96	77.200	ENSHGLG00000019371	MRPS18B	98	78.138	Heterocephalus_glaber_female
ENSRNOG00000000804	Mrps18b	96	77.291	ENSHGLG00100010530	MRPS18B	95	78.226	Heterocephalus_glaber_male
ENSRNOG00000000804	Mrps18b	79	48.966	ENSHCOG00000007012	mrps18b	76	54.255	Hippocampus_comes
ENSRNOG00000000804	Mrps18b	67	56.725	ENSIPUG00000013958	mrps18b	70	56.725	Ictalurus_punctatus
ENSRNOG00000000804	Mrps18b	89	81.304	ENSSTOG00000011853	MRPS18B	99	81.304	Ictidomys_tridecemlineatus
ENSRNOG00000000804	Mrps18b	98	82.283	ENSJJAG00000003794	Mrps18b	99	82.283	Jaculus_jaculus
ENSRNOG00000000804	Mrps18b	86	43.320	ENSKMAG00000003449	mrps18b	93	43.320	Kryptolebias_marmoratus
ENSRNOG00000000804	Mrps18b	68	46.927	ENSLBEG00000012943	mrps18b	73	46.927	Labrus_bergylta
ENSRNOG00000000804	Mrps18b	95	49.091	ENSLACG00000004722	MRPS18B	83	57.488	Latimeria_chalumnae
ENSRNOG00000000804	Mrps18b	98	77.519	ENSLAFG00000017285	MRPS18B	100	77.519	Loxodonta_africana
ENSRNOG00000000804	Mrps18b	98	77.821	ENSMFAG00000003966	MRPS18B	99	77.821	Macaca_fascicularis
ENSRNOG00000000804	Mrps18b	98	77.821	ENSMMUG00000006525	MRPS18B	99	77.821	Macaca_mulatta
ENSRNOG00000000804	Mrps18b	98	77.432	ENSMNEG00000045059	MRPS18B	99	77.432	Macaca_nemestrina
ENSRNOG00000000804	Mrps18b	98	72.374	ENSMLEG00000033833	MRPS18B	99	72.374	Mandrillus_leucophaeus
ENSRNOG00000000804	Mrps18b	84	44.295	ENSMAMG00000020243	mrps18b	83	49.495	Mastacembelus_armatus
ENSRNOG00000000804	Mrps18b	87	43.590	ENSMZEG00005017910	mrps18b	81	48.241	Maylandia_zebra
ENSRNOG00000000804	Mrps18b	56	47.222	ENSMZEG00005019697	-	68	47.222	Maylandia_zebra
ENSRNOG00000000804	Mrps18b	98	84.980	ENSMAUG00000019160	Mrps18b	100	84.980	Mesocricetus_auratus
ENSRNOG00000000804	Mrps18b	98	78.906	ENSMICG00000031536	MRPS18B	99	78.906	Microcebus_murinus
ENSRNOG00000000804	Mrps18b	97	87.649	ENSMOCG00000013273	Mrps18b	100	87.649	Microtus_ochrogaster
ENSRNOG00000000804	Mrps18b	85	45.033	ENSMMOG00000012076	mrps18b	82	49.485	Mola_mola
ENSRNOG00000000804	Mrps18b	82	74.286	ENSMODG00000015933	MRPS18B	95	69.298	Monodelphis_domestica
ENSRNOG00000000804	Mrps18b	97	43.023	ENSMALG00000019456	mrps18b	84	47.907	Monopterus_albus
ENSRNOG00000000804	Mrps18b	98	93.307	MGP_CAROLIEiJ_G0021541	Mrps18b	100	93.307	Mus_caroli
ENSRNOG00000000804	Mrps18b	98	91.732	ENSMUSG00000024436	Mrps18b	100	91.732	Mus_musculus
ENSRNOG00000000804	Mrps18b	98	91.304	MGP_PahariEiJ_G0020535	Mrps18b	100	91.304	Mus_pahari
ENSRNOG00000000804	Mrps18b	98	90.945	MGP_SPRETEiJ_G0022448	Mrps18b	100	90.945	Mus_spretus
ENSRNOG00000000804	Mrps18b	98	79.377	ENSMPUG00000011739	MRPS18B	99	79.377	Mustela_putorius_furo
ENSRNOG00000000804	Mrps18b	98	80.315	ENSMLUG00000008850	MRPS18B	99	80.315	Myotis_lucifugus
ENSRNOG00000000804	Mrps18b	93	83.333	ENSNGAG00000017874	Mrps18b	99	83.333	Nannospalax_galili
ENSRNOG00000000804	Mrps18b	56	44.138	ENSNBRG00000020716	-	78	44.138	Neolamprologus_brichardi
ENSRNOG00000000804	Mrps18b	98	78.210	ENSNLEG00000005224	MRPS18B	99	78.210	Nomascus_leucogenys
ENSRNOG00000000804	Mrps18b	95	61.212	ENSMEUG00000012457	MRPS18B	95	71.053	Notamacropus_eugenii
ENSRNOG00000000804	Mrps18b	51	85.385	ENSODEG00000017923	-	88	85.385	Octodon_degus
ENSRNOG00000000804	Mrps18b	99	43.605	ENSONIG00000015945	mrps18b	81	49.246	Oreochromis_niloticus
ENSRNOG00000000804	Mrps18b	87	81.858	ENSOCUG00000002149	MRPS18B	99	77.821	Oryctolagus_cuniculus
ENSRNOG00000000804	Mrps18b	68	54.598	ENSORLG00000010546	mrps18b	78	54.598	Oryzias_latipes
ENSRNOG00000000804	Mrps18b	68	55.172	ENSORLG00020018506	mrps18b	74	55.172	Oryzias_latipes_hni
ENSRNOG00000000804	Mrps18b	68	55.172	ENSORLG00015010248	mrps18b	73	55.172	Oryzias_latipes_hsok
ENSRNOG00000000804	Mrps18b	68	54.598	ENSOMEG00000008194	mrps18b	74	54.598	Oryzias_melastigma
ENSRNOG00000000804	Mrps18b	98	77.821	ENSOGAG00000004435	MRPS18B	100	77.821	Otolemur_garnettii
ENSRNOG00000000804	Mrps18b	98	79.377	ENSOARG00000012647	MRPS18B	99	79.377	Ovis_aries
ENSRNOG00000000804	Mrps18b	98	77.432	ENSPPAG00000018246	-	99	77.432	Pan_paniscus
ENSRNOG00000000804	Mrps18b	98	78.599	ENSPPAG00000039692	-	99	78.599	Pan_paniscus
ENSRNOG00000000804	Mrps18b	92	80.335	ENSPPRG00000003538	MRPS18B	99	78.599	Panthera_pardus
ENSRNOG00000000804	Mrps18b	93	79.433	ENSPTIG00000016443	MRPS18B	99	78.599	Panthera_tigris_altaica
ENSRNOG00000000804	Mrps18b	98	78.599	ENSPTRG00000017932	MRPS18B	99	78.599	Pan_troglodytes
ENSRNOG00000000804	Mrps18b	98	77.043	ENSPANG00000017647	MRPS18B	99	77.043	Papio_anubis
ENSRNOG00000000804	Mrps18b	79	46.099	ENSPKIG00000011007	mrps18b	74	51.087	Paramormyrops_kingsleyae
ENSRNOG00000000804	Mrps18b	71	61.538	ENSPSIG00000011533	MRPS18B	94	54.667	Pelodiscus_sinensis
ENSRNOG00000000804	Mrps18b	91	42.857	ENSPMGG00000020546	mrps18b	99	46.371	Periophthalmus_magnuspinnatus
ENSRNOG00000000804	Mrps18b	98	88.189	ENSPEMG00000001695	Mrps18b	99	90.129	Peromyscus_maniculatus_bairdii
ENSRNOG00000000804	Mrps18b	84	50.450	ENSPMAG00000001665	mrps18b	93	50.909	Petromyzon_marinus
ENSRNOG00000000804	Mrps18b	86	71.041	ENSPCIG00000014983	MRPS18B	85	68.996	Phascolarctos_cinereus
ENSRNOG00000000804	Mrps18b	72	48.855	ENSPFOG00000016437	mrps18b	62	52.299	Poecilia_formosa
ENSRNOG00000000804	Mrps18b	72	50.382	ENSPLAG00000002566	mrps18b	71	53.448	Poecilia_latipinna
ENSRNOG00000000804	Mrps18b	72	48.855	ENSPMEG00000010978	mrps18b	61	52.299	Poecilia_mexicana
ENSRNOG00000000804	Mrps18b	72	49.618	ENSPREG00000012186	mrps18b	65	52.571	Poecilia_reticulata
ENSRNOG00000000804	Mrps18b	99	77.483	ENSPPYG00000016412	MRPS18B	99	70.817	Pongo_abelii
ENSRNOG00000000804	Mrps18b	98	76.265	ENSPCAG00000017028	MRPS18B	99	76.265	Procavia_capensis
ENSRNOG00000000804	Mrps18b	96	68.924	ENSPCOG00000015431	MRPS18B	100	68.924	Propithecus_coquereli
ENSRNOG00000000804	Mrps18b	98	78.824	ENSPVAG00000003981	MRPS18B	99	78.824	Pteropus_vampyrus
ENSRNOG00000000804	Mrps18b	87	43.590	ENSPNYG00000011383	mrps18b	82	48.241	Pundamilia_nyererei
ENSRNOG00000000804	Mrps18b	50	46.923	ENSPNYG00000004553	-	70	46.923	Pundamilia_nyererei
ENSRNOG00000000804	Mrps18b	69	54.802	ENSPNAG00000029858	mrps18b	73	54.802	Pygocentrus_nattereri
ENSRNOG00000000804	Mrps18b	98	78.210	ENSRBIG00000037128	MRPS18B	99	78.210	Rhinopithecus_bieti
ENSRNOG00000000804	Mrps18b	98	78.210	ENSRROG00000017497	MRPS18B	99	78.210	Rhinopithecus_roxellana
ENSRNOG00000000804	Mrps18b	95	79.032	ENSSBOG00000023414	MRPS18B	99	78.138	Saimiri_boliviensis_boliviensis
ENSRNOG00000000804	Mrps18b	86	67.873	ENSSHAG00000006769	MRPS18B	90	66.960	Sarcophilus_harrisii
ENSRNOG00000000804	Mrps18b	73	49.254	ENSSFOG00015015664	mrps18b	77	52.432	Scleropages_formosus
ENSRNOG00000000804	Mrps18b	69	54.802	ENSSMAG00000020784	mrps18b	72	54.802	Scophthalmus_maximus
ENSRNOG00000000804	Mrps18b	99	41.622	ENSSDUG00000009519	mrps18b	99	46.639	Seriola_dumerili
ENSRNOG00000000804	Mrps18b	73	46.617	ENSSLDG00000000473	mrps18b	83	45.455	Seriola_lalandi_dorsalis
ENSRNOG00000000804	Mrps18b	71	60.989	ENSSPUG00000015230	MRPS18B	72	61.111	Sphenodon_punctatus
ENSRNOG00000000804	Mrps18b	68	54.545	ENSSPAG00000004508	mrps18b	99	45.679	Stegastes_partitus
ENSRNOG00000000804	Mrps18b	98	77.821	ENSSSCG00000029425	MRPS18B	99	77.821	Sus_scrofa
ENSRNOG00000000804	Mrps18b	86	43.902	ENSTRUG00000022309	mrps18b	86	43.902	Takifugu_rubripes
ENSRNOG00000000804	Mrps18b	98	78.988	ENSTTRG00000008313	MRPS18B	99	78.988	Tursiops_truncatus
ENSRNOG00000000804	Mrps18b	98	78.599	ENSUAMG00000005833	MRPS18B	99	78.599	Ursus_americanus
ENSRNOG00000000804	Mrps18b	99	78.682	ENSUMAG00000019652	MRPS18B	77	78.682	Ursus_maritimus
ENSRNOG00000000804	Mrps18b	99	65.537	ENSVPAG00000001181	MRPS18B	100	76.923	Vicugna_pacos
ENSRNOG00000000804	Mrps18b	98	78.125	ENSVVUG00000009631	MRPS18B	99	78.125	Vulpes_vulpes
ENSRNOG00000000804	Mrps18b	89	43.312	ENSXETG00000032503	MRPS18B	89	50.746	Xenopus_tropicalis
ENSRNOG00000000804	Mrps18b	72	49.618	ENSXCOG00000003011	mrps18b	86	53.448	Xiphophorus_couchianus
ENSRNOG00000000804	Mrps18b	68	52.874	ENSXMAG00000016698	mrps18b	71	52.874	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005654	nucleoplasm	-	IEA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005763	mitochondrial small ribosomal subunit	-	IEA	Component
GO:0005763	mitochondrial small ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0030054	cell junction	-	IEA	Component
GO:0030054	cell junction	-	ISO	Component
GO:0032543	mitochondrial translation	-	IEA	Process