EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000000833 (Gene tree)
Gene ID: 309596
Gene Symbol: Vars2
Alias: KIAA1885|Vars2l|Varsl|valRS
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 11018 bases
Position: chr20:3588497-3599514
Accession: 1303122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000046565	tRNA-synt_1g	PF09334.11	1.7e-15	1	1
ENSRNOP00000046565	Anticodon_1	PF08264.13	1.9e-31	1	1
ENSRNOP00000046565	tRNA-synt_1	PF00133.22	4.8e-183	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000091232	-	1185	-	-	- (aa)	-	-
ENSRNOT00000048103	-	3645	XM_006255932	ENSRNOP00000046565	1060 (aa)	XP_006255994	A0A0H2UHY0

Gene Model

Click here to download ENSRNOG00000000833's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000000833's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000000833	Vars2	92	52.663	ENSRNOG00000000867	Vars	83	50.712

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000000833	Vars2	94	51.217	ENSAPOG00000007396	vars2	97	50.708	Acanthochromis_polyacanthus
ENSRNOG00000000833	Vars2	100	82.298	ENSAMEG00000012997	VARS2	97	82.298	Ailuropoda_melanoleuca
ENSRNOG00000000833	Vars2	98	50.282	ENSACIG00000004344	vars2	99	50.282	Amphilophus_citrinellus
ENSRNOG00000000833	Vars2	94	51.167	ENSAOCG00000000476	vars2	97	50.660	Amphiprion_ocellaris
ENSRNOG00000000833	Vars2	94	51.167	ENSAPEG00000008646	vars2	95	50.660	Amphiprion_percula
ENSRNOG00000000833	Vars2	92	52.400	ENSATEG00000012291	vars2	97	51.344	Anabas_testudineus
ENSRNOG00000000833	Vars2	96	58.518	ENSACAG00000022093	VARS2	98	57.369	Anolis_carolinensis
ENSRNOG00000000833	Vars2	99	83.349	ENSANAG00000038018	VARS2	99	83.349	Aotus_nancymaae
ENSRNOG00000000833	Vars2	98	50.466	ENSACLG00000018673	vars2	99	50.466	Astatotilapia_calliptera
ENSRNOG00000000833	Vars2	95	52.395	ENSAMXG00000017773	vars2	97	53.586	Astyanax_mexicanus
ENSRNOG00000000833	Vars2	99	83.886	ENSBTAG00000010698	VARS2	99	83.822	Bos_taurus
ENSRNOG00000000833	Vars2	100	83.333	ENSCJAG00000019826	VARS2	99	83.333	Callithrix_jacchus
ENSRNOG00000000833	Vars2	100	81.544	ENSCAFG00000000454	VARS2	100	81.544	Canis_familiaris
ENSRNOG00000000833	Vars2	87	83.153	ENSCAFG00020019387	VARS2	95	83.190	Canis_lupus_dingo
ENSRNOG00000000833	Vars2	99	83.871	ENSCHIG00000007847	VARS2	99	83.648	Capra_hircus
ENSRNOG00000000833	Vars2	99	83.758	ENSTSYG00000009904	VARS2	99	83.758	Carlito_syrichta
ENSRNOG00000000833	Vars2	87	81.701	ENSCAPG00000017770	VARS2	99	81.701	Cavia_aperea
ENSRNOG00000000833	Vars2	99	81.226	ENSCPOG00000021834	VARS2	99	81.226	Cavia_porcellus
ENSRNOG00000000833	Vars2	99	83.728	ENSCCAG00000037907	VARS2	99	83.728	Cebus_capucinus
ENSRNOG00000000833	Vars2	99	84.106	ENSCATG00000032554	VARS2	99	84.106	Cercocebus_atys
ENSRNOG00000000833	Vars2	99	80.697	ENSCLAG00000002889	VARS2	99	80.697	Chinchilla_lanigera
ENSRNOG00000000833	Vars2	99	83.822	ENSCSAG00000008327	VARS2	99	83.822	Chlorocebus_sabaeus
ENSRNOG00000000833	Vars2	90	61.753	ENSCPBG00000021502	VARS2	96	61.689	Chrysemys_picta_bellii
ENSRNOG00000000833	Vars2	99	84.106	ENSCANG00000014991	VARS2	98	84.106	Colobus_angolensis_palliatus
ENSRNOG00000000833	Vars2	99	90.258	ENSCGRG00001021535	Vars2	100	90.094	Cricetulus_griseus_chok1gshd
ENSRNOG00000000833	Vars2	99	90.258	ENSCGRG00000014112	Vars2	100	90.094	Cricetulus_griseus_crigri
ENSRNOG00000000833	Vars2	87	55.727	ENSCSEG00000015432	vars2	97	56.027	Cynoglossus_semilaevis
ENSRNOG00000000833	Vars2	65	50.847	ENSCVAG00000017765	vars2	94	52.283	Cyprinodon_variegatus
ENSRNOG00000000833	Vars2	97	52.050	ENSDARG00000056717	vars2	98	52.050	Danio_rerio
ENSRNOG00000000833	Vars2	79	84.423	ENSDORG00000008516	Vars2	93	84.423	Dipodomys_ordii
ENSRNOG00000000833	Vars2	99	72.917	ENSETEG00000014844	VARS2	99	72.917	Echinops_telfairi
ENSRNOG00000000833	Vars2	99	83.789	ENSEASG00005019997	VARS2	97	83.789	Equus_asinus_asinus
ENSRNOG00000000833	Vars2	99	84.826	ENSECAG00000018202	VARS2	99	84.826	Equus_caballus
ENSRNOG00000000833	Vars2	67	78.641	ENSEEUG00000012591	-	67	78.641	Erinaceus_europaeus
ENSRNOG00000000833	Vars2	93	52.132	ENSELUG00000017824	vars2	97	51.507	Esox_lucius
ENSRNOG00000000833	Vars2	100	83.333	ENSFCAG00000010531	VARS2	100	83.333	Felis_catus
ENSRNOG00000000833	Vars2	99	82.015	ENSFDAG00000017216	VARS2	99	82.015	Fukomys_damarensis
ENSRNOG00000000833	Vars2	84	52.009	ENSFHEG00000013932	vars2	93	50.209	Fundulus_heteroclitus
ENSRNOG00000000833	Vars2	89	55.731	ENSGMOG00000018960	vars2	99	55.731	Gadus_morhua
ENSRNOG00000000833	Vars2	83	49.817	ENSGAFG00000004737	vars2	91	49.817	Gambusia_affinis
ENSRNOG00000000833	Vars2	92	53.401	ENSGACG00000001464	vars2	99	53.401	Gasterosteus_aculeatus
ENSRNOG00000000833	Vars2	91	60.790	ENSGAGG00000011652	VARS2	99	60.790	Gopherus_agassizii
ENSRNOG00000000833	Vars2	99	83.822	ENSGGOG00000014587	VARS2	99	83.822	Gorilla_gorilla
ENSRNOG00000000833	Vars2	98	48.926	ENSHBUG00000002448	vars2	100	48.926	Haplochromis_burtoni
ENSRNOG00000000833	Vars2	99	81.356	ENSHGLG00000012886	VARS2	96	81.356	Heterocephalus_glaber_female
ENSRNOG00000000833	Vars2	99	81.168	ENSHGLG00100016535	VARS2	99	81.168	Heterocephalus_glaber_male
ENSRNOG00000000833	Vars2	68	50.405	ENSHCOG00000017907	vars2	94	51.622	Hippocampus_comes
ENSRNOG00000000833	Vars2	92	53.479	ENSIPUG00000015573	Vars2	98	52.300	Ictalurus_punctatus
ENSRNOG00000000833	Vars2	99	85.472	ENSSTOG00000009924	VARS2	99	85.472	Ictidomys_tridecemlineatus
ENSRNOG00000000833	Vars2	99	82.153	ENSJJAG00000011144	Vars2	99	82.153	Jaculus_jaculus
ENSRNOG00000000833	Vars2	93	50.777	ENSKMAG00000001393	vars2	98	50.140	Kryptolebias_marmoratus
ENSRNOG00000000833	Vars2	95	50.864	ENSLBEG00000011949	vars2	97	50.473	Labrus_bergylta
ENSRNOG00000000833	Vars2	52	63.243	ENSLBEG00000005480	-	81	63.225	Labrus_bergylta
ENSRNOG00000000833	Vars2	95	51.741	ENSLACG00000001576	-	99	51.838	Latimeria_chalumnae
ENSRNOG00000000833	Vars2	99	83.239	ENSLAFG00000015183	VARS2	99	83.239	Loxodonta_africana
ENSRNOG00000000833	Vars2	99	83.917	ENSMFAG00000042367	VARS2	99	83.917	Macaca_fascicularis
ENSRNOG00000000833	Vars2	99	83.917	ENSMMUG00000018609	VARS2	99	83.917	Macaca_mulatta
ENSRNOG00000000833	Vars2	99	84.106	ENSMNEG00000043163	VARS2	99	84.106	Macaca_nemestrina
ENSRNOG00000000833	Vars2	99	84.201	ENSMLEG00000041728	VARS2	97	84.201	Mandrillus_leucophaeus
ENSRNOG00000000833	Vars2	95	50.144	ENSMAMG00000020339	vars2	98	49.345	Mastacembelus_armatus
ENSRNOG00000000833	Vars2	98	50.372	ENSMZEG00005017669	vars2	99	50.372	Maylandia_zebra
ENSRNOG00000000833	Vars2	100	90.009	ENSMAUG00000018946	Vars2	100	90.009	Mesocricetus_auratus
ENSRNOG00000000833	Vars2	84	85.874	ENSMICG00000005365	VARS2	100	85.874	Microcebus_murinus
ENSRNOG00000000833	Vars2	94	91.879	ENSMOCG00000014607	Vars2	100	91.879	Microtus_ochrogaster
ENSRNOG00000000833	Vars2	93	51.693	ENSMMOG00000012122	vars2	98	50.331	Mola_mola
ENSRNOG00000000833	Vars2	99	73.421	ENSMODG00000015848	VARS2	99	73.421	Monodelphis_domestica
ENSRNOG00000000833	Vars2	89	53.894	ENSMALG00000009217	vars2	95	53.894	Monopterus_albus
ENSRNOG00000000833	Vars2	100	94.623	MGP_CAROLIEiJ_G0021529	Vars2	100	94.623	Mus_caroli
ENSRNOG00000000833	Vars2	100	94.340	ENSMUSG00000038838	Vars2	100	94.340	Mus_musculus
ENSRNOG00000000833	Vars2	100	94.434	MGP_PahariEiJ_G0020523	Vars2	100	94.434	Mus_pahari
ENSRNOG00000000833	Vars2	100	94.340	MGP_SPRETEiJ_G0022436	Vars2	100	94.340	Mus_spretus
ENSRNOG00000000833	Vars2	100	82.768	ENSMPUG00000011643	VARS2	100	82.768	Mustela_putorius_furo
ENSRNOG00000000833	Vars2	99	80.579	ENSMLUG00000002356	VARS2	97	80.579	Myotis_lucifugus
ENSRNOG00000000833	Vars2	99	79.507	ENSNGAG00000020607	Vars2	100	79.362	Nannospalax_galili
ENSRNOG00000000833	Vars2	61	48.485	ENSNBRG00000001624	vars2	58	49.311	Neolamprologus_brichardi
ENSRNOG00000000833	Vars2	99	80.190	ENSNLEG00000005625	VARS2	97	80.190	Nomascus_leucogenys
ENSRNOG00000000833	Vars2	78	73.957	ENSMEUG00000014475	VARS2	89	73.957	Notamacropus_eugenii
ENSRNOG00000000833	Vars2	89	81.858	ENSOPRG00000000682	VARS2	90	81.858	Ochotona_princeps
ENSRNOG00000000833	Vars2	99	80.038	ENSODEG00000017965	VARS2	99	80.038	Octodon_degus
ENSRNOG00000000833	Vars2	67	56.036	ENSONIG00000004734	vars2	72	58.680	Oreochromis_niloticus
ENSRNOG00000000833	Vars2	75	85.294	ENSOANG00000000398	-	98	85.294	Ornithorhynchus_anatinus
ENSRNOG00000000833	Vars2	99	77.530	ENSOCUG00000021496	VARS2	64	77.530	Oryctolagus_cuniculus
ENSRNOG00000000833	Vars2	93	50.836	ENSORLG00000010632	vars2	96	49.810	Oryzias_latipes
ENSRNOG00000000833	Vars2	93	51.030	ENSORLG00020018584	vars2	95	50.047	Oryzias_latipes_hni
ENSRNOG00000000833	Vars2	92	51.572	ENSORLG00015010408	vars2	96	50.521	Oryzias_latipes_hsok
ENSRNOG00000000833	Vars2	93	52.178	ENSOMEG00000008360	vars2	96	50.851	Oryzias_melastigma
ENSRNOG00000000833	Vars2	99	84.136	ENSOGAG00000006087	VARS2	97	84.136	Otolemur_garnettii
ENSRNOG00000000833	Vars2	99	82.938	ENSOARG00000010844	VARS2	98	82.720	Ovis_aries
ENSRNOG00000000833	Vars2	99	84.011	ENSPPAG00000041141	VARS2	99	84.011	Pan_paniscus
ENSRNOG00000000833	Vars2	100	82.580	ENSPPRG00000006751	VARS2	97	82.580	Panthera_pardus
ENSRNOG00000000833	Vars2	100	82.486	ENSPTIG00000017799	VARS2	98	83.534	Panthera_tigris_altaica
ENSRNOG00000000833	Vars2	99	84.011	ENSPTRG00000034497	VARS2	99	84.011	Pan_troglodytes
ENSRNOG00000000833	Vars2	99	84.106	ENSPANG00000018481	VARS2	100	84.124	Papio_anubis
ENSRNOG00000000833	Vars2	95	53.906	ENSPKIG00000011372	vars2	98	53.119	Paramormyrops_kingsleyae
ENSRNOG00000000833	Vars2	59	66.244	ENSPSIG00000006206	VARS2	92	65.432	Pelodiscus_sinensis
ENSRNOG00000000833	Vars2	97	51.766	ENSPMGG00000000465	vars2	99	51.766	Periophthalmus_magnuspinnatus
ENSRNOG00000000833	Vars2	100	92.358	ENSPEMG00000014691	Vars2	100	92.358	Peromyscus_maniculatus_bairdii
ENSRNOG00000000833	Vars2	99	75.024	ENSPCIG00000015040	VARS2	99	75.024	Phascolarctos_cinereus
ENSRNOG00000000833	Vars2	92	52.433	ENSPFOG00000017616	vars2	95	51.751	Poecilia_formosa
ENSRNOG00000000833	Vars2	92	51.980	ENSPLAG00000019778	vars2	99	50.000	Poecilia_latipinna
ENSRNOG00000000833	Vars2	92	52.079	ENSPMEG00000011123	vars2	97	50.904	Poecilia_mexicana
ENSRNOG00000000833	Vars2	90	47.604	ENSPREG00000014998	vars2	95	46.443	Poecilia_reticulata
ENSRNOG00000000833	Vars2	99	83.917	ENSPPYG00000016424	VARS2	99	83.917	Pongo_abelii
ENSRNOG00000000833	Vars2	83	77.629	ENSPCAG00000006946	VARS2	84	77.629	Procavia_capensis
ENSRNOG00000000833	Vars2	99	82.881	ENSPCOG00000014839	VARS2	97	82.881	Propithecus_coquereli
ENSRNOG00000000833	Vars2	99	81.930	ENSPVAG00000004197	VARS2	99	81.930	Pteropus_vampyrus
ENSRNOG00000000833	Vars2	82	59.140	ENSPNYG00000010314	vars2	100	59.140	Pundamilia_nyererei
ENSRNOG00000000833	Vars2	94	53.346	ENSPNAG00000026793	vars2	94	53.346	Pygocentrus_nattereri
ENSRNOG00000000833	Vars2	99	83.728	ENSRBIG00000032725	VARS2	99	83.728	Rhinopithecus_bieti
ENSRNOG00000000833	Vars2	99	83.728	ENSRROG00000043847	VARS2	99	83.728	Rhinopithecus_roxellana
ENSRNOG00000000833	Vars2	99	81.372	ENSSBOG00000033240	VARS2	97	81.372	Saimiri_boliviensis_boliviensis
ENSRNOG00000000833	Vars2	99	74.078	ENSSHAG00000009307	VARS2	99	74.078	Sarcophilus_harrisii
ENSRNOG00000000833	Vars2	97	52.919	ENSSFOG00015016187	vars2	98	52.519	Scleropages_formosus
ENSRNOG00000000833	Vars2	92	53.815	ENSSMAG00000020842	vars2	96	52.913	Scophthalmus_maximus
ENSRNOG00000000833	Vars2	93	51.957	ENSSDUG00000011598	vars2	97	51.576	Seriola_dumerili
ENSRNOG00000000833	Vars2	90	52.561	ENSSLDG00000015492	vars2	97	50.574	Seriola_lalandi_dorsalis
ENSRNOG00000000833	Vars2	57	85.401	ENSSARG00000003786	-	69	85.401	Sorex_araneus
ENSRNOG00000000833	Vars2	88	59.275	ENSSPUG00000014700	VARS2	94	59.275	Sphenodon_punctatus
ENSRNOG00000000833	Vars2	92	50.100	ENSSPAG00000004654	vars2	98	48.912	Stegastes_partitus
ENSRNOG00000000833	Vars2	100	83.710	ENSSSCG00000001384	VARS2	100	83.710	Sus_scrofa
ENSRNOG00000000833	Vars2	93	52.941	ENSTRUG00000005264	vars2	96	52.386	Takifugu_rubripes
ENSRNOG00000000833	Vars2	99	50.372	ENSTNIG00000005916	vars2	99	50.649	Tetraodon_nigroviridis
ENSRNOG00000000833	Vars2	52	83.582	ENSTBEG00000007976	-	52	83.582	Tupaia_belangeri
ENSRNOG00000000833	Vars2	93	84.305	ENSTTRG00000012243	VARS2	99	71.807	Tursiops_truncatus
ENSRNOG00000000833	Vars2	100	82.408	ENSUAMG00000026124	VARS2	100	83.839	Ursus_americanus
ENSRNOG00000000833	Vars2	100	83.051	ENSUMAG00000019894	VARS2	100	83.051	Ursus_maritimus
ENSRNOG00000000833	Vars2	100	81.921	ENSVVUG00000010754	VARS2	95	81.921	Vulpes_vulpes
ENSRNOG00000000833	Vars2	89	54.006	ENSXETG00000003036	vars2	99	54.006	Xenopus_tropicalis
ENSRNOG00000000833	Vars2	90	53.790	ENSXCOG00000003455	vars2	96	52.187	Xiphophorus_couchianus
ENSRNOG00000000833	Vars2	92	51.976	ENSXMAG00000013523	vars2	97	50.997	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002161	aminoacyl-tRNA editing activity	-	IEA	Function
GO:0004832	valine-tRNA ligase activity	21873635.	IBA	Function
GO:0004832	valine-tRNA ligase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0006438	valyl-tRNA aminoacylation	21873635.	IBA	Process
GO:0006438	valyl-tRNA aminoacylation	-	IEA	Process
GO:0106074	aminoacyl-tRNA metabolism involved in translational fidelity	-	IEA	Process