EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000000848 (Gene tree)
Gene ID: 415064
Gene Symbol: Gpank1
Alias: Bat4
Full Name: G patch domain and ankyrin repeats 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 3044 bases
Position: chr20:5113339-5116382
Accession: 1303304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001124	G-patch	PF01585.23	5.3e-13	1	1
ENSRNOP00000068420	G-patch	PF01585.23	5.3e-13	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000076738	-	1360	XM_006256075	ENSRNOP00000068420	350 (aa)	XP_006256137	D3ZX77
ENSRNOT00000001124	-	1407	XM_006256076	ENSRNOP00000001124	350 (aa)	XP_006256138	D3ZX77

Gene Model

Click here to download ENSRNOG00000000848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000000848's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000000848	Gpank1	100	79.050	ENSG00000204438	GPANK1	100	76.257	Homo_sapiens
ENSRNOG00000000848	Gpank1	87	36.562	ENSAPOG00000010685	-	98	36.364	Acanthochromis_polyacanthus
ENSRNOG00000000848	Gpank1	87	36.562	ENSAPOG00000014355	-	98	36.364	Acanthochromis_polyacanthus
ENSRNOG00000000848	Gpank1	100	75.071	ENSAMEG00000009290	GPANK1	94	75.071	Ailuropoda_melanoleuca
ENSRNOG00000000848	Gpank1	97	34.853	ENSAOCG00000024034	GPANK1	67	43.529	Amphiprion_ocellaris
ENSRNOG00000000848	Gpank1	97	35.598	ENSAPEG00000000530	GPANK1	67	43.529	Amphiprion_percula
ENSRNOG00000000848	Gpank1	97	36.047	ENSATEG00000008243	-	74	41.339	Anabas_testudineus
ENSRNOG00000000848	Gpank1	100	74.862	ENSANAG00000026356	GPANK1	100	74.586	Aotus_nancymaae
ENSRNOG00000000848	Gpank1	71	43.307	ENSACLG00000001320	GPANK1	98	38.068	Astatotilapia_calliptera
ENSRNOG00000000848	Gpank1	97	38.701	ENSAMXG00000012581	-	85	39.831	Astyanax_mexicanus
ENSRNOG00000000848	Gpank1	100	74.788	ENSBTAG00000008835	GPANK1	100	75.071	Bos_taurus
ENSRNOG00000000848	Gpank1	100	76.880	ENSCJAG00000003002	GPANK1	100	75.766	Callithrix_jacchus
ENSRNOG00000000848	Gpank1	100	76.204	ENSCAFG00000000601	GPANK1	100	76.204	Canis_familiaris
ENSRNOG00000000848	Gpank1	100	76.204	ENSCAFG00020020706	GPANK1	100	76.204	Canis_lupus_dingo
ENSRNOG00000000848	Gpank1	100	76.353	ENSCHIG00000024637	GPANK1	100	76.353	Capra_hircus
ENSRNOG00000000848	Gpank1	100	75.419	ENSTSYG00000028288	GPANK1	100	74.860	Carlito_syrichta
ENSRNOG00000000848	Gpank1	100	72.958	ENSCAPG00000005661	GPANK1	95	72.394	Cavia_aperea
ENSRNOG00000000848	Gpank1	100	73.239	ENSCPOG00000031872	GPANK1	100	72.958	Cavia_porcellus
ENSRNOG00000000848	Gpank1	100	74.586	ENSCCAG00000019583	GPANK1	100	74.033	Cebus_capucinus
ENSRNOG00000000848	Gpank1	100	78.492	ENSCATG00000036761	GPANK1	100	79.330	Cercocebus_atys
ENSRNOG00000000848	Gpank1	100	76.338	ENSCLAG00000014639	GPANK1	99	75.775	Chinchilla_lanigera
ENSRNOG00000000848	Gpank1	100	78.212	ENSCSAG00000008570	GPANK1	100	79.050	Chlorocebus_sabaeus
ENSRNOG00000000848	Gpank1	99	46.575	ENSCPBG00000014706	GPANK1	99	45.455	Chrysemys_picta_bellii
ENSRNOG00000000848	Gpank1	100	78.212	ENSCANG00000038862	GPANK1	100	77.095	Colobus_angolensis_palliatus
ENSRNOG00000000848	Gpank1	100	85.028	ENSCGRG00001007828	Gpank1	97	85.552	Cricetulus_griseus_chok1gshd
ENSRNOG00000000848	Gpank1	100	85.028	ENSCGRG00000014676	Gpank1	100	85.552	Cricetulus_griseus_crigri
ENSRNOG00000000848	Gpank1	90	35.103	ENSCVAG00000020672	-	68	41.667	Cyprinodon_variegatus
ENSRNOG00000000848	Gpank1	100	34.959	ENSDARG00000053995	gpank1	100	35.813	Danio_rerio
ENSRNOG00000000848	Gpank1	100	75.556	ENSDNOG00000018727	GPANK1	100	75.140	Dasypus_novemcinctus
ENSRNOG00000000848	Gpank1	100	73.889	ENSDORG00000024662	Gpank1	100	73.611	Dipodomys_ordii
ENSRNOG00000000848	Gpank1	100	71.067	ENSETEG00000015166	GPANK1	100	71.910	Echinops_telfairi
ENSRNOG00000000848	Gpank1	100	79.603	ENSEASG00005016313	GPANK1	100	78.754	Equus_asinus_asinus
ENSRNOG00000000848	Gpank1	100	78.754	ENSECAG00000019093	GPANK1	100	78.754	Equus_caballus
ENSRNOG00000000848	Gpank1	97	37.101	ENSELUG00000009653	-	98	36.311	Esox_lucius
ENSRNOG00000000848	Gpank1	100	76.487	ENSFCAG00000023899	GPANK1	100	76.487	Felis_catus
ENSRNOG00000000848	Gpank1	100	75.921	ENSFDAG00000018857	GPANK1	100	75.921	Fukomys_damarensis
ENSRNOG00000000848	Gpank1	96	35.616	ENSFHEG00000013343	-	97	37.017	Fundulus_heteroclitus
ENSRNOG00000000848	Gpank1	97	39.045	ENSGMOG00000007797	GPANK1	98	39.045	Gadus_morhua
ENSRNOG00000000848	Gpank1	100	37.430	ENSGAFG00000012817	-	98	36.872	Gambusia_affinis
ENSRNOG00000000848	Gpank1	98	37.892	ENSGACG00000016703	-	98	37.143	Gasterosteus_aculeatus
ENSRNOG00000000848	Gpank1	99	45.983	ENSGAGG00000011085	GPANK1	99	44.875	Gopherus_agassizii
ENSRNOG00000000848	Gpank1	100	79.330	ENSGGOG00000005539	GPANK1	100	79.050	Gorilla_gorilla
ENSRNOG00000000848	Gpank1	71	42.353	ENSHBUG00000018924	-	99	38.873	Haplochromis_burtoni
ENSRNOG00000000848	Gpank1	100	77.465	ENSHGLG00000011853	GPANK1	99	76.056	Heterocephalus_glaber_female
ENSRNOG00000000848	Gpank1	100	76.571	ENSHGLG00100018021	GPANK1	100	76.286	Heterocephalus_glaber_male
ENSRNOG00000000848	Gpank1	71	41.107	ENSHCOG00000000542	-	68	42.745	Hippocampus_comes
ENSRNOG00000000848	Gpank1	100	78.917	ENSSTOG00000024202	GPANK1	100	78.917	Ictidomys_tridecemlineatus
ENSRNOG00000000848	Gpank1	100	80.398	ENSJJAG00000015387	Gpank1	100	80.398	Jaculus_jaculus
ENSRNOG00000000848	Gpank1	92	32.869	ENSLBEG00000006109	-	53	40.094	Labrus_bergylta
ENSRNOG00000000848	Gpank1	93	36.176	ENSLBEG00000006075	-	88	35.965	Labrus_bergylta
ENSRNOG00000000848	Gpank1	71	37.302	ENSLBEG00000005751	GPANK1	75	37.302	Labrus_bergylta
ENSRNOG00000000848	Gpank1	100	41.351	ENSLACG00000008055	GPANK1	100	40.591	Latimeria_chalumnae
ENSRNOG00000000848	Gpank1	98	43.909	ENSLOCG00000008972	GPANK1	99	43.750	Lepisosteus_oculatus
ENSRNOG00000000848	Gpank1	100	72.853	ENSLAFG00000009499	GPANK1	94	74.792	Loxodonta_africana
ENSRNOG00000000848	Gpank1	100	77.374	ENSMFAG00000037562	GPANK1	100	78.212	Macaca_fascicularis
ENSRNOG00000000848	Gpank1	100	77.933	ENSMNEG00000040965	GPANK1	100	78.771	Macaca_nemestrina
ENSRNOG00000000848	Gpank1	100	78.212	ENSMLEG00000034247	GPANK1	100	79.050	Mandrillus_leucophaeus
ENSRNOG00000000848	Gpank1	98	35.467	ENSMAMG00000008470	-	67	43.307	Mastacembelus_armatus
ENSRNOG00000000848	Gpank1	89	37.421	ENSMZEG00005012135	GPANK1	99	39.385	Maylandia_zebra
ENSRNOG00000000848	Gpank1	100	85.429	ENSMAUG00000014293	Gpank1	100	85.429	Mesocricetus_auratus
ENSRNOG00000000848	Gpank1	100	76.389	ENSMICG00000037690	GPANK1	100	76.111	Microcebus_murinus
ENSRNOG00000000848	Gpank1	100	88.857	ENSMOCG00000000141	Gpank1	100	88.857	Microtus_ochrogaster
ENSRNOG00000000848	Gpank1	90	38.629	ENSMMOG00000003606	-	76	43.137	Mola_mola
ENSRNOG00000000848	Gpank1	100	60.224	ENSMODG00000015291	GPANK1	99	60.504	Monodelphis_domestica
ENSRNOG00000000848	Gpank1	71	41.667	ENSMALG00000002757	-	75	43.307	Monopterus_albus
ENSRNOG00000000848	Gpank1	100	91.429	MGP_CAROLIEiJ_G0021506	Gpank1	100	91.143	Mus_caroli
ENSRNOG00000000848	Gpank1	100	90.857	ENSMUSG00000092417	Gpank1	100	90.286	Mus_musculus
ENSRNOG00000000848	Gpank1	100	90.598	MGP_PahariEiJ_G0020501	Gpank1	100	90.028	Mus_pahari
ENSRNOG00000000848	Gpank1	100	90.857	MGP_SPRETEiJ_G0022411	Gpank1	100	90.286	Mus_spretus
ENSRNOG00000000848	Gpank1	100	73.938	ENSMPUG00000011149	GPANK1	100	74.788	Mustela_putorius_furo
ENSRNOG00000000848	Gpank1	100	74.504	ENSMLUG00000009408	GPANK1	94	73.088	Myotis_lucifugus
ENSRNOG00000000848	Gpank1	100	78.212	ENSNLEG00000006201	GPANK1	100	77.374	Nomascus_leucogenys
ENSRNOG00000000848	Gpank1	100	63.533	ENSMEUG00000004082	GPANK1	100	63.533	Notamacropus_eugenii
ENSRNOG00000000848	Gpank1	100	72.222	ENSOPRG00000012134	GPANK1	100	72.222	Ochotona_princeps
ENSRNOG00000000848	Gpank1	99	74.571	ENSODEG00000017947	GPANK1	99	74.294	Octodon_degus
ENSRNOG00000000848	Gpank1	100	72.778	ENSOCUG00000021491	GPANK1	100	73.056	Oryctolagus_cuniculus
ENSRNOG00000000848	Gpank1	97	34.463	ENSORLG00000009014	-	75	42.692	Oryzias_latipes
ENSRNOG00000000848	Gpank1	71	41.176	ENSORLG00020012082	-	68	42.802	Oryzias_latipes_hni
ENSRNOG00000000848	Gpank1	71	40.784	ENSORLG00015011561	-	68	42.412	Oryzias_latipes_hsok
ENSRNOG00000000848	Gpank1	100	75.140	ENSOGAG00000010276	GPANK1	100	76.536	Otolemur_garnettii
ENSRNOG00000000848	Gpank1	100	76.638	ENSOARG00000006913	GPANK1	97	76.638	Ovis_aries
ENSRNOG00000000848	Gpank1	100	78.771	ENSPPAG00000035166	GPANK1	100	75.978	Pan_paniscus
ENSRNOG00000000848	Gpank1	100	75.921	ENSPPRG00000001737	GPANK1	100	75.921	Panthera_pardus
ENSRNOG00000000848	Gpank1	100	75.921	ENSPTIG00000014920	GPANK1	100	75.921	Panthera_tigris_altaica
ENSRNOG00000000848	Gpank1	100	78.771	ENSPTRG00000017973	GPANK1	100	75.978	Pan_troglodytes
ENSRNOG00000000848	Gpank1	100	78.212	ENSPANG00000007625	GPANK1	100	79.050	Papio_anubis
ENSRNOG00000000848	Gpank1	98	41.761	ENSPKIG00000001197	GPANK1	100	41.761	Paramormyrops_kingsleyae
ENSRNOG00000000848	Gpank1	99	45.429	ENSPSIG00000006795	GPANK1	99	43.681	Pelodiscus_sinensis
ENSRNOG00000000848	Gpank1	97	37.322	ENSPMGG00000019843	-	99	38.095	Periophthalmus_magnuspinnatus
ENSRNOG00000000848	Gpank1	100	87.535	ENSPEMG00000014457	Gpank1	100	88.068	Peromyscus_maniculatus_bairdii
ENSRNOG00000000848	Gpank1	99	36.997	ENSPMAG00000010274	GPANK1	100	37.433	Petromyzon_marinus
ENSRNOG00000000848	Gpank1	100	63.277	ENSPCIG00000018505	GPANK1	100	64.689	Phascolarctos_cinereus
ENSRNOG00000000848	Gpank1	96	34.000	ENSPFOG00000009128	-	98	34.605	Poecilia_formosa
ENSRNOG00000000848	Gpank1	98	35.955	ENSPLAG00000007457	-	99	35.955	Poecilia_latipinna
ENSRNOG00000000848	Gpank1	96	33.238	ENSPMEG00000011187	-	98	34.605	Poecilia_mexicana
ENSRNOG00000000848	Gpank1	97	35.593	ENSPREG00000000043	-	97	35.754	Poecilia_reticulata
ENSRNOG00000000848	Gpank1	100	79.330	ENSPPYG00000016447	GPANK1	90	76.536	Pongo_abelii
ENSRNOG00000000848	Gpank1	100	58.217	ENSPCAG00000012850	GPANK1	100	59.331	Procavia_capensis
ENSRNOG00000000848	Gpank1	100	78.333	ENSPCOG00000017559	GPANK1	100	78.056	Propithecus_coquereli
ENSRNOG00000000848	Gpank1	61	74.126	ENSPVAG00000012380	-	58	74.126	Pteropus_vampyrus
ENSRNOG00000000848	Gpank1	71	42.353	ENSPNYG00000021711	GPANK1	99	38.873	Pundamilia_nyererei
ENSRNOG00000000848	Gpank1	100	77.095	ENSRROG00000036770	GPANK1	100	75.978	Rhinopithecus_roxellana
ENSRNOG00000000848	Gpank1	100	76.177	ENSSBOG00000031598	GPANK1	100	75.900	Saimiri_boliviensis_boliviensis
ENSRNOG00000000848	Gpank1	98	44.602	ENSSFOG00015015696	gpank1	99	43.923	Scleropages_formosus
ENSRNOG00000000848	Gpank1	97	37.183	ENSSMAG00000021273	-	98	36.901	Scophthalmus_maximus
ENSRNOG00000000848	Gpank1	85	40.196	ENSSDUG00000016390	-	85	44.531	Seriola_dumerili
ENSRNOG00000000848	Gpank1	87	40.000	ENSSLDG00000022692	-	65	44.531	Seriola_lalandi_dorsalis
ENSRNOG00000000848	Gpank1	100	75.000	ENSSARG00000013203	GPANK1	100	75.000	Sorex_araneus
ENSRNOG00000000848	Gpank1	99	39.798	ENSSPUG00000017213	GPANK1	99	39.798	Sphenodon_punctatus
ENSRNOG00000000848	Gpank1	91	35.694	ENSSPAG00000023053	GPANK1	94	37.465	Stegastes_partitus
ENSRNOG00000000848	Gpank1	100	75.706	ENSSSCG00000001413	GPANK1	100	76.638	Sus_scrofa
ENSRNOG00000000848	Gpank1	97	35.838	ENSTRUG00000024606	-	98	35.838	Takifugu_rubripes
ENSRNOG00000000848	Gpank1	100	74.788	ENSTTRG00000014102	GPANK1	100	74.788	Tursiops_truncatus
ENSRNOG00000000848	Gpank1	100	76.487	ENSUAMG00000012437	GPANK1	100	76.771	Ursus_americanus
ENSRNOG00000000848	Gpank1	100	76.204	ENSUMAG00000014147	GPANK1	100	76.487	Ursus_maritimus
ENSRNOG00000000848	Gpank1	100	75.284	ENSVPAG00000002989	GPANK1	100	75.284	Vicugna_pacos
ENSRNOG00000000848	Gpank1	100	76.487	ENSVVUG00000020893	GPANK1	100	76.487	Vulpes_vulpes
ENSRNOG00000000848	Gpank1	100	36.740	ENSXETG00000002509	gpank1	100	36.066	Xenopus_tropicalis
ENSRNOG00000000848	Gpank1	97	33.714	ENSXCOG00000005699	-	95	33.807	Xiphophorus_couchianus
ENSRNOG00000000848	Gpank1	97	34.000	ENSXMAG00000026046	-	98	35.695	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function