EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000001056 (Gene tree)
Gene ID: 304204
Gene Symbol: Snapc2
Alias: LOC304204
Full Name: small nuclear RNA activating complex%2C polypeptide 2
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 3394 bases
Position: chr12:2537275-2540668
Accession: 1304589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001398	SnAPC_2_like	PF11035.8	1.1e-136	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000001398	-	1705	XM_008768956	ENSRNOP00000001398	359 (aa)	XP_008767178	Q68FX5

Gene Model

Click here to download ENSRNOG00000001056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000001056's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000001056	Snapc2	96	60.684	ENSG00000104976	SNAPC2	100	61.475	Homo_sapiens
ENSRNOG00000001056	Snapc2	99	59.066	ENSAMEG00000008622	SNAPC2	99	59.066	Ailuropoda_melanoleuca
ENSRNOG00000001056	Snapc2	58	42.466	ENSAOCG00000013265	-	52	42.466	Amphiprion_ocellaris
ENSRNOG00000001056	Snapc2	78	35.099	ENSAPEG00000010950	-	61	35.099	Amphiprion_percula
ENSRNOG00000001056	Snapc2	78	33.140	ENSATEG00000003573	-	65	32.075	Anabas_testudineus
ENSRNOG00000001056	Snapc2	98	37.958	ENSACAG00000026540	-	98	37.958	Anolis_carolinensis
ENSRNOG00000001056	Snapc2	100	62.117	ENSANAG00000029939	SNAPC2	100	62.117	Aotus_nancymaae
ENSRNOG00000001056	Snapc2	70	32.903	ENSACLG00000013092	-	58	34.641	Astatotilapia_calliptera
ENSRNOG00000001056	Snapc2	98	60.674	ENSBTAG00000014926	SNAPC2	99	60.674	Bos_taurus
ENSRNOG00000001056	Snapc2	96	60.694	ENSCJAG00000006117	SNAPC2	100	60.714	Callithrix_jacchus
ENSRNOG00000001056	Snapc2	100	60.606	ENSCAFG00000031676	SNAPC2	100	60.606	Canis_familiaris
ENSRNOG00000001056	Snapc2	100	60.606	ENSCAFG00020022851	SNAPC2	100	60.606	Canis_lupus_dingo
ENSRNOG00000001056	Snapc2	88	65.190	ENSTSYG00000037088	SNAPC2	100	65.190	Carlito_syrichta
ENSRNOG00000001056	Snapc2	100	57.143	ENSCPOG00000034229	SNAPC2	100	57.143	Cavia_porcellus
ENSRNOG00000001056	Snapc2	96	61.561	ENSCCAG00000034172	SNAPC2	100	62.117	Cebus_capucinus
ENSRNOG00000001056	Snapc2	96	62.717	ENSCATG00000037131	SNAPC2	100	63.231	Cercocebus_atys
ENSRNOG00000001056	Snapc2	100	60.053	ENSCLAG00000006885	SNAPC2	100	60.053	Chinchilla_lanigera
ENSRNOG00000001056	Snapc2	96	62.139	ENSCSAG00000008167	SNAPC2	100	62.088	Chlorocebus_sabaeus
ENSRNOG00000001056	Snapc2	98	36.905	ENSCPBG00000002277	SNAPC2	98	37.857	Chrysemys_picta_bellii
ENSRNOG00000001056	Snapc2	96	61.850	ENSCANG00000040525	SNAPC2	100	62.396	Colobus_angolensis_palliatus
ENSRNOG00000001056	Snapc2	100	77.159	ENSCGRG00001006223	Snapc2	100	77.159	Cricetulus_griseus_chok1gshd
ENSRNOG00000001056	Snapc2	83	73.490	ENSCGRG00000005622	Snapc2	98	73.490	Cricetulus_griseus_crigri
ENSRNOG00000001056	Snapc2	74	33.566	ENSCSEG00000014882	-	59	33.566	Cynoglossus_semilaevis
ENSRNOG00000001056	Snapc2	99	57.341	ENSDNOG00000036458	SNAPC2	98	57.341	Dasypus_novemcinctus
ENSRNOG00000001056	Snapc2	96	59.249	ENSDORG00000009155	Snapc2	95	71.765	Dipodomys_ordii
ENSRNOG00000001056	Snapc2	99	57.064	ENSETEG00000012986	SNAPC2	99	57.064	Echinops_telfairi
ENSRNOG00000001056	Snapc2	100	66.125	ENSEASG00005003809	SNAPC2	100	67.956	Equus_asinus_asinus
ENSRNOG00000001056	Snapc2	100	64.770	ENSECAG00000011011	SNAPC2	100	66.575	Equus_caballus
ENSRNOG00000001056	Snapc2	100	62.983	ENSFCAG00000014945	SNAPC2	100	62.983	Felis_catus
ENSRNOG00000001056	Snapc2	83	57.718	ENSFDAG00000001564	SNAPC2	100	61.111	Fukomys_damarensis
ENSRNOG00000001056	Snapc2	98	36.967	ENSGAGG00000015845	SNAPC2	99	37.915	Gopherus_agassizii
ENSRNOG00000001056	Snapc2	96	60.399	ENSGGOG00000022392	SNAPC2	100	60.989	Gorilla_gorilla
ENSRNOG00000001056	Snapc2	100	62.155	ENSHGLG00000011707	SNAPC2	100	62.431	Heterocephalus_glaber_female
ENSRNOG00000001056	Snapc2	100	58.047	ENSHGLG00100003422	SNAPC2	100	58.311	Heterocephalus_glaber_male
ENSRNOG00000001056	Snapc2	98	33.333	ENSHCOG00000002795	-	97	33.777	Hippocampus_comes
ENSRNOG00000001056	Snapc2	100	60.221	ENSSTOG00000009102	SNAPC2	100	60.221	Ictidomys_tridecemlineatus
ENSRNOG00000001056	Snapc2	100	63.514	ENSJJAG00000003060	Snapc2	100	73.600	Jaculus_jaculus
ENSRNOG00000001056	Snapc2	79	36.310	ENSKMAG00000007231	-	68	36.310	Kryptolebias_marmoratus
ENSRNOG00000001056	Snapc2	98	34.677	ENSLOCG00000014065	snapc2	98	35.598	Lepisosteus_oculatus
ENSRNOG00000001056	Snapc2	100	57.493	ENSLAFG00000023323	SNAPC2	100	57.493	Loxodonta_africana
ENSRNOG00000001056	Snapc2	96	62.428	ENSMFAG00000034273	SNAPC2	100	62.953	Macaca_fascicularis
ENSRNOG00000001056	Snapc2	96	62.428	ENSMMUG00000006540	SNAPC2	100	62.953	Macaca_mulatta
ENSRNOG00000001056	Snapc2	96	61.850	ENSMNEG00000039547	SNAPC2	100	61.813	Macaca_nemestrina
ENSRNOG00000001056	Snapc2	96	62.717	ENSMLEG00000031059	SNAPC2	100	63.231	Mandrillus_leucophaeus
ENSRNOG00000001056	Snapc2	74	37.209	ENSMAMG00000018195	-	56	37.209	Mastacembelus_armatus
ENSRNOG00000001056	Snapc2	70	32.903	ENSMZEG00005009488	-	58	34.641	Maylandia_zebra
ENSRNOG00000001056	Snapc2	79	82.400	ENSMAUG00000015015	Snapc2	100	82.400	Mesocricetus_auratus
ENSRNOG00000001056	Snapc2	100	67.956	ENSMICG00000035695	SNAPC2	100	67.956	Microcebus_murinus
ENSRNOG00000001056	Snapc2	100	75.209	ENSMOCG00000019080	Snapc2	100	75.209	Microtus_ochrogaster
ENSRNOG00000001056	Snapc2	93	46.591	ENSMODG00000005069	-	99	47.368	Monodelphis_domestica
ENSRNOG00000001056	Snapc2	98	30.914	ENSMALG00000002335	-	99	30.914	Monopterus_albus
ENSRNOG00000001056	Snapc2	100	85.237	MGP_CAROLIEiJ_G0030795	Snapc2	100	85.237	Mus_caroli
ENSRNOG00000001056	Snapc2	100	84.958	ENSMUSG00000011837	Snapc2	100	84.958	Mus_musculus
ENSRNOG00000001056	Snapc2	100	84.123	MGP_SPRETEiJ_G0031903	Snapc2	100	84.123	Mus_spretus
ENSRNOG00000001056	Snapc2	100	60.548	ENSMPUG00000008010	SNAPC2	100	61.096	Mustela_putorius_furo
ENSRNOG00000001056	Snapc2	84	47.333	ENSMLUG00000013735	-	87	46.341	Myotis_lucifugus
ENSRNOG00000001056	Snapc2	96	56.447	ENSMLUG00000013689	-	100	57.735	Myotis_lucifugus
ENSRNOG00000001056	Snapc2	77	52.518	ENSMLUG00000001710	-	96	47.564	Myotis_lucifugus
ENSRNOG00000001056	Snapc2	77	51.203	ENSMLUG00000006427	-	89	50.980	Myotis_lucifugus
ENSRNOG00000001056	Snapc2	78	50.890	ENSMLUG00000002738	-	90	51.014	Myotis_lucifugus
ENSRNOG00000001056	Snapc2	85	63.279	ENSNGAG00000014201	Snapc2	95	63.279	Nannospalax_galili
ENSRNOG00000001056	Snapc2	96	60.969	ENSNLEG00000001250	SNAPC2	100	61.813	Nomascus_leucogenys
ENSRNOG00000001056	Snapc2	100	46.995	ENSMEUG00000014367	SNAPC2	100	46.995	Notamacropus_eugenii
ENSRNOG00000001056	Snapc2	99	62.363	ENSODEG00000011415	SNAPC2	99	62.363	Octodon_degus
ENSRNOG00000001056	Snapc2	76	31.655	ENSONIG00000002078	-	93	33.333	Oreochromis_niloticus
ENSRNOG00000001056	Snapc2	100	54.496	ENSOCUG00000027536	SNAPC2	77	55.041	Oryctolagus_cuniculus
ENSRNOG00000001056	Snapc2	98	32.039	ENSORLG00000010375	-	80	33.010	Oryzias_latipes
ENSRNOG00000001056	Snapc2	98	33.985	ENSORLG00020015071	-	97	33.985	Oryzias_latipes_hni
ENSRNOG00000001056	Snapc2	98	32.090	ENSOMEG00000003040	snapc2	95	33.416	Oryzias_melastigma
ENSRNOG00000001056	Snapc2	99	57.263	ENSOGAG00000012870	SNAPC2	99	57.263	Otolemur_garnettii
ENSRNOG00000001056	Snapc2	84	57.980	ENSOARG00000003045	SNAPC2	100	57.980	Ovis_aries
ENSRNOG00000001056	Snapc2	96	57.465	ENSPPAG00000032460	SNAPC2	100	58.378	Pan_paniscus
ENSRNOG00000001056	Snapc2	100	62.953	ENSPPRG00000003265	SNAPC2	100	62.953	Panthera_pardus
ENSRNOG00000001056	Snapc2	86	54.723	ENSPTIG00000016014	SNAPC2	89	54.723	Panthera_tigris_altaica
ENSRNOG00000001056	Snapc2	96	60.399	ENSPTRG00000042034	SNAPC2	100	61.264	Pan_troglodytes
ENSRNOG00000001056	Snapc2	96	62.428	ENSPANG00000025882	SNAPC2	100	62.953	Papio_anubis
ENSRNOG00000001056	Snapc2	80	33.221	ENSPKIG00000000084	snapc2	62	34.564	Paramormyrops_kingsleyae
ENSRNOG00000001056	Snapc2	95	37.875	ENSPSIG00000016099	SNAPC2	99	38.947	Pelodiscus_sinensis
ENSRNOG00000001056	Snapc2	100	77.994	ENSPEMG00000009767	Snapc2	100	77.994	Peromyscus_maniculatus_bairdii
ENSRNOG00000001056	Snapc2	99	31.856	ENSPFOG00000012045	-	99	31.856	Poecilia_formosa
ENSRNOG00000001056	Snapc2	98	30.607	ENSPLAG00000018873	-	98	30.607	Poecilia_latipinna
ENSRNOG00000001056	Snapc2	66	40.000	ENSPMEG00000002270	-	59	40.000	Poecilia_mexicana
ENSRNOG00000001056	Snapc2	72	38.356	ENSPREG00000003140	-	71	38.356	Poecilia_reticulata
ENSRNOG00000001056	Snapc2	96	60.684	ENSPPYG00000009494	SNAPC2	100	61.264	Pongo_abelii
ENSRNOG00000001056	Snapc2	55	77.049	ENSPCAG00000015864	-	59	77.049	Procavia_capensis
ENSRNOG00000001056	Snapc2	100	62.707	ENSPCOG00000026672	SNAPC2	100	64.917	Propithecus_coquereli
ENSRNOG00000001056	Snapc2	78	73.333	ENSPVAG00000002296	SNAPC2	77	73.333	Pteropus_vampyrus
ENSRNOG00000001056	Snapc2	75	39.865	ENSPNAG00000020947	snapc2	65	39.865	Pygocentrus_nattereri
ENSRNOG00000001056	Snapc2	96	60.983	ENSRBIG00000044314	SNAPC2	100	61.560	Rhinopithecus_bieti
ENSRNOG00000001056	Snapc2	96	60.983	ENSRROG00000043480	SNAPC2	100	61.560	Rhinopithecus_roxellana
ENSRNOG00000001056	Snapc2	96	61.850	ENSSBOG00000011587	SNAPC2	100	61.813	Saimiri_boliviensis_boliviensis
ENSRNOG00000001056	Snapc2	94	40.625	ENSSHAG00000009002	-	100	41.910	Sarcophilus_harrisii
ENSRNOG00000001056	Snapc2	75	35.484	ENSSMAG00000009095	-	56	35.484	Scophthalmus_maximus
ENSRNOG00000001056	Snapc2	78	35.669	ENSSDUG00000016949	-	59	35.032	Seriola_dumerili
ENSRNOG00000001056	Snapc2	100	46.685	ENSSARG00000012954	SNAPC2	99	47.790	Sorex_araneus
ENSRNOG00000001056	Snapc2	94	38.857	ENSSPUG00000014836	-	64	39.886	Sphenodon_punctatus
ENSRNOG00000001056	Snapc2	100	60.218	ENSSSCG00000013589	SNAPC2	100	60.218	Sus_scrofa
ENSRNOG00000001056	Snapc2	80	30.892	ENSTRUG00000005122	-	99	31.447	Takifugu_rubripes
ENSRNOG00000001056	Snapc2	100	60.434	ENSTTRG00000010165	SNAPC2	100	60.434	Tursiops_truncatus
ENSRNOG00000001056	Snapc2	100	60.833	ENSUAMG00000021489	SNAPC2	100	60.278	Ursus_americanus
ENSRNOG00000001056	Snapc2	86	54.487	ENSUMAG00000014809	SNAPC2	86	54.487	Ursus_maritimus
ENSRNOG00000001056	Snapc2	100	60.331	ENSVVUG00000026998	SNAPC2	100	60.331	Vulpes_vulpes
ENSRNOG00000001056	Snapc2	75	37.333	ENSXMAG00000027683	-	59	37.333	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0016604	nuclear body	21873635.	IBA	Component
GO:0016604	nuclear body	-	ISO	Component