EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000001060 (Gene tree)
Gene ID: 360803
Gene Symbol: Snrnp35
Alias: LOC360803|RGD1310724|U1snrnpbp
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 35
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 7309 bases
Position: chr12:37531095-37538403
Accession: 1310724
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001402	RRM_1	PF00076.22	4.9e-17	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000001402	-	1107	XM_006249325	ENSRNOP00000001402	244 (aa)	XP_006249387	G3V639

Gene Model

Click here to download ENSRNOG00000001060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000001060's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000001060	Snrnp35	100	89.024	ENSG00000184209	SNRNP35	100	89.024	Homo_sapiens
ENSRNOG00000001060	Snrnp35	100	90.650	ENSAMEG00000019650	SNRNP35	99	90.650	Ailuropoda_melanoleuca
ENSRNOG00000001060	Snrnp35	78	74.372	ENSACIG00000003238	snrnp35	80	82.353	Amphilophus_citrinellus
ENSRNOG00000001060	Snrnp35	70	80.000	ENSAOCG00000007701	snrnp35	79	80.000	Amphiprion_ocellaris
ENSRNOG00000001060	Snrnp35	78	75.263	ENSAPEG00000023725	snrnp35	82	78.286	Amphiprion_percula
ENSRNOG00000001060	Snrnp35	70	79.412	ENSATEG00000021269	snrnp35	88	79.412	Anabas_testudineus
ENSRNOG00000001060	Snrnp35	100	76.613	ENSAPLG00000015654	SNRNP35	90	80.717	Anas_platyrhynchos
ENSRNOG00000001060	Snrnp35	89	78.182	ENSACAG00000015421	SNRNP35	85	77.232	Anolis_carolinensis
ENSRNOG00000001060	Snrnp35	100	88.664	ENSANAG00000025109	SNRNP35	97	87.449	Aotus_nancymaae
ENSRNOG00000001060	Snrnp35	70	81.765	ENSACLG00000020994	SNRNP35	81	81.765	Astatotilapia_calliptera
ENSRNOG00000001060	Snrnp35	70	81.765	ENSACLG00000020890	snrnp35	81	81.765	Astatotilapia_calliptera
ENSRNOG00000001060	Snrnp35	69	79.762	ENSAMXG00000026163	snrnp35	80	79.762	Astyanax_mexicanus
ENSRNOG00000001060	Snrnp35	100	89.837	ENSBTAG00000008060	SNRNP35	100	89.837	Bos_taurus
ENSRNOG00000001060	Snrnp35	100	88.618	ENSCJAG00000007131	SNRNP35	98	88.618	Callithrix_jacchus
ENSRNOG00000001060	Snrnp35	100	88.618	ENSCAFG00000007484	SNRNP35	100	88.618	Canis_familiaris
ENSRNOG00000001060	Snrnp35	100	88.618	ENSCAFG00020015272	-	100	88.618	Canis_lupus_dingo
ENSRNOG00000001060	Snrnp35	100	89.837	ENSCHIG00000006364	SNRNP35	100	89.837	Capra_hircus
ENSRNOG00000001060	Snrnp35	100	90.650	ENSTSYG00000034104	SNRNP35	99	90.650	Carlito_syrichta
ENSRNOG00000001060	Snrnp35	100	87.805	ENSCPOG00000002548	SNRNP35	100	87.805	Cavia_porcellus
ENSRNOG00000001060	Snrnp35	100	88.664	ENSCCAG00000001685	SNRNP35	98	87.449	Cebus_capucinus
ENSRNOG00000001060	Snrnp35	100	88.618	ENSCATG00000021946	SNRNP35	99	88.618	Cercocebus_atys
ENSRNOG00000001060	Snrnp35	100	88.211	ENSCLAG00000010232	SNRNP35	100	88.211	Chinchilla_lanigera
ENSRNOG00000001060	Snrnp35	100	88.211	ENSCSAG00000018950	SNRNP35	100	88.211	Chlorocebus_sabaeus
ENSRNOG00000001060	Snrnp35	100	90.650	ENSCHOG00000006263	SNRNP35	99	90.650	Choloepus_hoffmanni
ENSRNOG00000001060	Snrnp35	96	75.949	ENSCPBG00000025965	SNRNP35	91	74.390	Chrysemys_picta_bellii
ENSRNOG00000001060	Snrnp35	69	57.396	ENSCSAVG00000000748	-	94	57.396	Ciona_savignyi
ENSRNOG00000001060	Snrnp35	100	87.805	ENSCANG00000025364	SNRNP35	98	87.805	Colobus_angolensis_palliatus
ENSRNOG00000001060	Snrnp35	100	95.935	ENSCGRG00001012630	Snrnp35	100	95.935	Cricetulus_griseus_chok1gshd
ENSRNOG00000001060	Snrnp35	100	95.935	ENSCGRG00000002063	Snrnp35	100	95.935	Cricetulus_griseus_crigri
ENSRNOG00000001060	Snrnp35	68	77.711	ENSDARG00000099913	snrnp35	81	76.786	Danio_rerio
ENSRNOG00000001060	Snrnp35	100	91.057	ENSDNOG00000038603	SNRNP35	100	91.057	Dasypus_novemcinctus
ENSRNOG00000001060	Snrnp35	100	90.244	ENSDORG00000001859	Snrnp35	100	90.244	Dipodomys_ordii
ENSRNOG00000001060	Snrnp35	69	59.524	ENSEBUG00000003535	snrnp35	62	60.241	Eptatretus_burgeri
ENSRNOG00000001060	Snrnp35	99	90.164	ENSEASG00005012617	SNRNP35	99	90.164	Equus_asinus_asinus
ENSRNOG00000001060	Snrnp35	99	90.164	ENSECAG00000006080	SNRNP35	99	90.164	Equus_caballus
ENSRNOG00000001060	Snrnp35	81	91.878	ENSEEUG00000011544	SNRNP35	80	91.878	Erinaceus_europaeus
ENSRNOG00000001060	Snrnp35	71	79.885	ENSELUG00000000071	snrnp35	72	79.885	Esox_lucius
ENSRNOG00000001060	Snrnp35	100	89.837	ENSFCAG00000001159	SNRNP35	98	89.837	Felis_catus
ENSRNOG00000001060	Snrnp35	100	76.230	ENSFALG00000014650	SNRNP35	100	76.230	Ficedula_albicollis
ENSRNOG00000001060	Snrnp35	100	80.081	ENSFDAG00000018743	SNRNP35	100	79.268	Fukomys_damarensis
ENSRNOG00000001060	Snrnp35	86	65.611	ENSGMOG00000002299	snrnp35	73	77.059	Gadus_morhua
ENSRNOG00000001060	Snrnp35	93	79.204	ENSGALG00000003318	SNRNP35	91	76.033	Gallus_gallus
ENSRNOG00000001060	Snrnp35	70	77.647	ENSGACG00000020631	snrnp35	73	77.647	Gasterosteus_aculeatus
ENSRNOG00000001060	Snrnp35	100	89.024	ENSGGOG00000015936	SNRNP35	98	89.024	Gorilla_gorilla
ENSRNOG00000001060	Snrnp35	85	70.561	ENSHBUG00000015853	snrnp35	80	81.765	Haplochromis_burtoni
ENSRNOG00000001060	Snrnp35	100	87.805	ENSHGLG00000017961	SNRNP35	100	87.805	Heterocephalus_glaber_female
ENSRNOG00000001060	Snrnp35	100	87.805	ENSHGLG00100019252	SNRNP35	100	87.805	Heterocephalus_glaber_male
ENSRNOG00000001060	Snrnp35	72	74.286	ENSIPUG00000016053	snrnp35	66	74.286	Ictalurus_punctatus
ENSRNOG00000001060	Snrnp35	100	85.366	ENSSTOG00000025145	SNRNP35	100	85.366	Ictidomys_tridecemlineatus
ENSRNOG00000001060	Snrnp35	100	91.057	ENSJJAG00000013421	Snrnp35	97	91.057	Jaculus_jaculus
ENSRNOG00000001060	Snrnp35	100	72.541	ENSLACG00000017176	SNRNP35	87	72.131	Latimeria_chalumnae
ENSRNOG00000001060	Snrnp35	80	74.359	ENSLOCG00000018154	snrnp35	64	80.460	Lepisosteus_oculatus
ENSRNOG00000001060	Snrnp35	100	89.837	ENSLAFG00000022302	SNRNP35	100	89.837	Loxodonta_africana
ENSRNOG00000001060	Snrnp35	100	88.211	ENSMFAG00000008986	SNRNP35	99	88.211	Macaca_fascicularis
ENSRNOG00000001060	Snrnp35	100	88.211	ENSMMUG00000008411	SNRNP35	99	88.211	Macaca_mulatta
ENSRNOG00000001060	Snrnp35	100	88.211	ENSMNEG00000018139	SNRNP35	99	88.211	Macaca_nemestrina
ENSRNOG00000001060	Snrnp35	100	88.618	ENSMLEG00000040998	SNRNP35	98	88.618	Mandrillus_leucophaeus
ENSRNOG00000001060	Snrnp35	69	82.738	ENSMAMG00000018927	snrnp35	72	81.765	Mastacembelus_armatus
ENSRNOG00000001060	Snrnp35	70	81.765	ENSMZEG00005018928	snrnp35	81	81.765	Maylandia_zebra
ENSRNOG00000001060	Snrnp35	68	75.758	ENSMZEG00005018947	-	78	75.758	Maylandia_zebra
ENSRNOG00000001060	Snrnp35	100	76.230	ENSMGAG00000003241	SNRNP35	100	76.230	Meleagris_gallopavo
ENSRNOG00000001060	Snrnp35	100	96.341	ENSMAUG00000001690	Snrnp35	100	96.341	Mesocricetus_auratus
ENSRNOG00000001060	Snrnp35	100	89.024	ENSMICG00000026512	SNRNP35	98	89.024	Microcebus_murinus
ENSRNOG00000001060	Snrnp35	100	95.935	ENSMOCG00000000548	Snrnp35	100	95.935	Microtus_ochrogaster
ENSRNOG00000001060	Snrnp35	70	80.000	ENSMMOG00000018779	snrnp35	72	80.000	Mola_mola
ENSRNOG00000001060	Snrnp35	73	87.151	ENSMODG00000012481	SNRNP35	97	88.506	Monodelphis_domestica
ENSRNOG00000001060	Snrnp35	100	97.131	MGP_CAROLIEiJ_G0027752	Snrnp35	100	98.347	Mus_caroli
ENSRNOG00000001060	Snrnp35	100	97.951	ENSMUSG00000029402	Snrnp35	100	99.174	Mus_musculus
ENSRNOG00000001060	Snrnp35	100	96.721	MGP_PahariEiJ_G0024332	Snrnp35	100	99.174	Mus_pahari
ENSRNOG00000001060	Snrnp35	100	97.951	MGP_SPRETEiJ_G0028751	Snrnp35	100	99.174	Mus_spretus
ENSRNOG00000001060	Snrnp35	100	90.650	ENSMPUG00000019392	SNRNP35	100	90.650	Mustela_putorius_furo
ENSRNOG00000001060	Snrnp35	100	86.585	ENSMLUG00000025311	SNRNP35	100	88.211	Myotis_lucifugus
ENSRNOG00000001060	Snrnp35	100	91.129	ENSNGAG00000010711	Snrnp35	100	91.129	Nannospalax_galili
ENSRNOG00000001060	Snrnp35	100	89.024	ENSNLEG00000029859	SNRNP35	98	89.024	Nomascus_leucogenys
ENSRNOG00000001060	Snrnp35	100	89.024	ENSOPRG00000011119	SNRNP35	99	86.585	Ochotona_princeps
ENSRNOG00000001060	Snrnp35	100	89.024	ENSODEG00000019870	SNRNP35	100	89.024	Octodon_degus
ENSRNOG00000001060	Snrnp35	80	71.498	ENSONIG00000021361	snrnp35	89	70.183	Oreochromis_niloticus
ENSRNOG00000001060	Snrnp35	96	78.601	ENSOANG00000002697	SNRNP35	95	81.739	Ornithorhynchus_anatinus
ENSRNOG00000001060	Snrnp35	100	88.211	ENSOCUG00000021248	SNRNP35	100	88.211	Oryctolagus_cuniculus
ENSRNOG00000001060	Snrnp35	69	82.738	ENSORLG00000005673	snrnp35	79	82.738	Oryzias_latipes
ENSRNOG00000001060	Snrnp35	69	83.333	ENSORLG00015014439	snrnp35	82	83.333	Oryzias_latipes_hsok
ENSRNOG00000001060	Snrnp35	100	89.837	ENSOGAG00000011301	SNRNP35	100	89.837	Otolemur_garnettii
ENSRNOG00000001060	Snrnp35	100	89.837	ENSOARG00000004583	SNRNP35	100	89.837	Ovis_aries
ENSRNOG00000001060	Snrnp35	100	88.618	ENSPPAG00000000480	SNRNP35	98	88.618	Pan_paniscus
ENSRNOG00000001060	Snrnp35	100	89.431	ENSPPRG00000013139	SNRNP35	98	89.431	Panthera_pardus
ENSRNOG00000001060	Snrnp35	100	89.431	ENSPTIG00000015832	SNRNP35	98	89.431	Panthera_tigris_altaica
ENSRNOG00000001060	Snrnp35	100	88.618	ENSPTRG00000023573	SNRNP35	98	88.618	Pan_troglodytes
ENSRNOG00000001060	Snrnp35	100	88.618	ENSPANG00000019739	SNRNP35	98	88.618	Papio_anubis
ENSRNOG00000001060	Snrnp35	69	79.882	ENSPKIG00000005221	snrnp35	81	79.882	Paramormyrops_kingsleyae
ENSRNOG00000001060	Snrnp35	100	75.203	ENSPSIG00000000450	SNRNP35	91	75.203	Pelodiscus_sinensis
ENSRNOG00000001060	Snrnp35	89	81.818	ENSPCIG00000010978	SNRNP35	93	78.049	Phascolarctos_cinereus
ENSRNOG00000001060	Snrnp35	76	78.919	ENSPFOG00000019881	snrnp35	76	84.524	Poecilia_formosa
ENSRNOG00000001060	Snrnp35	100	89.024	ENSPPYG00000005088	SNRNP35	98	89.024	Pongo_abelii
ENSRNOG00000001060	Snrnp35	100	88.211	ENSPCAG00000011478	SNRNP35	99	88.211	Procavia_capensis
ENSRNOG00000001060	Snrnp35	100	89.837	ENSPCOG00000009946	SNRNP35	99	89.837	Propithecus_coquereli
ENSRNOG00000001060	Snrnp35	100	89.837	ENSPVAG00000015317	SNRNP35	99	89.837	Pteropus_vampyrus
ENSRNOG00000001060	Snrnp35	99	66.534	ENSPNAG00000020589	snrnp35	69	79.096	Pygocentrus_nattereri
ENSRNOG00000001060	Snrnp35	100	88.211	ENSRBIG00000043111	SNRNP35	98	88.211	Rhinopithecus_bieti
ENSRNOG00000001060	Snrnp35	100	88.211	ENSRROG00000032878	SNRNP35	98	88.211	Rhinopithecus_roxellana
ENSRNOG00000001060	Snrnp35	100	88.664	ENSSBOG00000012231	SNRNP35	98	87.449	Saimiri_boliviensis_boliviensis
ENSRNOG00000001060	Snrnp35	100	76.016	ENSSHAG00000001216	-	100	74.390	Sarcophilus_harrisii
ENSRNOG00000001060	Snrnp35	89	81.364	ENSSHAG00000015558	-	100	76.423	Sarcophilus_harrisii
ENSRNOG00000001060	Snrnp35	73	77.966	ENSSFOG00015003785	snrnp35	90	81.065	Scleropages_formosus
ENSRNOG00000001060	Snrnp35	80	72.308	ENSSLDG00000017209	snrnp35	80	80.000	Seriola_lalandi_dorsalis
ENSRNOG00000001060	Snrnp35	100	86.992	ENSSARG00000012656	SNRNP35	99	87.805	Sorex_araneus
ENSRNOG00000001060	Snrnp35	96	72.881	ENSSPUG00000012768	SNRNP35	93	71.951	Sphenodon_punctatus
ENSRNOG00000001060	Snrnp35	85	71.564	ENSSPAG00000008207	snrnp35	79	80.588	Stegastes_partitus
ENSRNOG00000001060	Snrnp35	100	89.431	ENSSSCG00000022212	SNRNP35	99	91.509	Sus_scrofa
ENSRNOG00000001060	Snrnp35	100	75.820	ENSTGUG00000005364	-	100	76.446	Taeniopygia_guttata
ENSRNOG00000001060	Snrnp35	96	77.021	ENSTGUG00000015471	-	91	75.410	Taeniopygia_guttata
ENSRNOG00000001060	Snrnp35	69	80.357	ENSTNIG00000009984	snrnp35	80	80.357	Tetraodon_nigroviridis
ENSRNOG00000001060	Snrnp35	100	86.992	ENSTBEG00000002309	SNRNP35	99	86.992	Tupaia_belangeri
ENSRNOG00000001060	Snrnp35	100	90.650	ENSUAMG00000012611	SNRNP35	100	90.650	Ursus_americanus
ENSRNOG00000001060	Snrnp35	100	90.650	ENSUMAG00000003914	SNRNP35	97	90.650	Ursus_maritimus
ENSRNOG00000001060	Snrnp35	100	88.618	ENSVVUG00000027761	-	100	88.618	Vulpes_vulpes
ENSRNOG00000001060	Snrnp35	76	78.919	ENSXMAG00000019885	snrnp35	67	84.524	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005689	U12-type spliceosomal complex	21873635.	IBA	Component
GO:0005689	U12-type spliceosomal complex	-	IEA	Component
GO:0005689	U12-type spliceosomal complex	-	ISO	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component