EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000001080 (Gene tree)
Gene ID: 288656
Gene Symbol: Arl6ip4
Alias: LOC288656|MGC114409|MGC124687|aip-4
Full Name: ADP-ribosylation factor like GTPase 6 interacting protein 4
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 2143 bases
Position: chr12:37904379-37906521
Accession: 1307657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001432	SR-25	PF10500.9	3e-104	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000001432	-	1187	-	ENSRNOP00000001432	231 (aa)	-	Q4V8I5

Gene Model

Click here to download ENSRNOG00000001080's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000001080's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000001080	Arl6ip4	87	82.178	ENSG00000182196	ARL6IP4	85	81.818	Homo_sapiens
ENSRNOG00000001080	Arl6ip4	90	66.514	ENSAMEG00000015055	-	70	66.341	Ailuropoda_melanoleuca
ENSRNOG00000001080	Arl6ip4	87	82.000	ENSANAG00000035845	ARL6IP4	85	82.143	Aotus_nancymaae
ENSRNOG00000001080	Arl6ip4	87	78.607	ENSBTAG00000001594	ARL6IP4	85	79.188	Bos_taurus
ENSRNOG00000001080	Arl6ip4	87	76.500	ENSCJAG00000016476	-	85	76.531	Callithrix_jacchus
ENSRNOG00000001080	Arl6ip4	90	82.938	ENSCAFG00000007665	ARL6IP4	85	80.808	Canis_familiaris
ENSRNOG00000001080	Arl6ip4	90	82.381	ENSCAFG00020016288	-	85	80.711	Canis_lupus_dingo
ENSRNOG00000001080	Arl6ip4	87	79.208	ENSCHIG00000014369	-	85	82.323	Capra_hircus
ENSRNOG00000001080	Arl6ip4	87	83.168	ENSTSYG00000030992	ARL6IP4	85	83.333	Carlito_syrichta
ENSRNOG00000001080	Arl6ip4	90	74.641	ENSCPOG00000031539	-	85	75.510	Cavia_porcellus
ENSRNOG00000001080	Arl6ip4	87	80.500	ENSCCAG00000037235	ARL6IP4	84	80.612	Cebus_capucinus
ENSRNOG00000001080	Arl6ip4	83	80.412	ENSCATG00000004525	-	86	84.536	Cercocebus_atys
ENSRNOG00000001080	Arl6ip4	100	89.610	ENSCGRG00001024174	Arl6ip4	100	85.281	Cricetulus_griseus_chok1gshd
ENSRNOG00000001080	Arl6ip4	100	89.610	ENSCGRG00000002843	Arl6ip4	100	85.281	Cricetulus_griseus_crigri
ENSRNOG00000001080	Arl6ip4	81	78.723	ENSDNOG00000044908	-	94	80.851	Dasypus_novemcinctus
ENSRNOG00000001080	Arl6ip4	80	75.676	ENSETEG00000008410	ARL6IP4	59	74.619	Echinops_telfairi
ENSRNOG00000001080	Arl6ip4	100	79.741	ENSEASG00005012544	-	85	80.711	Equus_asinus_asinus
ENSRNOG00000001080	Arl6ip4	100	77.586	ENSECAG00000023197	ARL6IP4	85	80.711	Equus_caballus
ENSRNOG00000001080	Arl6ip4	90	81.991	ENSFCAG00000006132	-	85	82.828	Felis_catus
ENSRNOG00000001080	Arl6ip4	90	76.077	ENSFDAG00000009535	-	84	77.041	Fukomys_damarensis
ENSRNOG00000001080	Arl6ip4	90	76.555	ENSHGLG00000011726	-	85	78.061	Heterocephalus_glaber_female
ENSRNOG00000001080	Arl6ip4	90	76.555	ENSHGLG00100018434	-	85	78.061	Heterocephalus_glaber_male
ENSRNOG00000001080	Arl6ip4	87	83.663	ENSSTOG00000010405	-	85	82.143	Ictidomys_tridecemlineatus
ENSRNOG00000001080	Arl6ip4	100	82.251	ENSJJAG00000019114	Arl6ip4	85	84.694	Jaculus_jaculus
ENSRNOG00000001080	Arl6ip4	91	77.619	ENSLAFG00000005314	-	85	79.082	Loxodonta_africana
ENSRNOG00000001080	Arl6ip4	84	76.884	ENSMMUG00000015930	ARL6IP4	51	93.578	Macaca_mulatta
ENSRNOG00000001080	Arl6ip4	83	80.311	ENSMNEG00000015953	ARL6IP4	86	84.456	Macaca_nemestrina
ENSRNOG00000001080	Arl6ip4	87	84.500	ENSMAUG00000018929	Arl6ip4	84	83.420	Mesocricetus_auratus
ENSRNOG00000001080	Arl6ip4	100	87.446	ENSMOCG00000001258	Arl6ip4	100	87.446	Microtus_ochrogaster
ENSRNOG00000001080	Arl6ip4	90	89.474	MGP_CAROLIEiJ_G0027744	Arl6ip4	84	90.306	Mus_caroli
ENSRNOG00000001080	Arl6ip4	90	89.952	ENSMUSG00000029404	Arl6ip4	96	84.536	Mus_musculus
ENSRNOG00000001080	Arl6ip4	90	86.603	MGP_PahariEiJ_G0024324	Arl6ip4	84	86.735	Mus_pahari
ENSRNOG00000001080	Arl6ip4	90	90.909	MGP_SPRETEiJ_G0028742	Arl6ip4	96	85.567	Mus_spretus
ENSRNOG00000001080	Arl6ip4	90	82.648	ENSMPUG00000001705	ARL6IP4	70	77.073	Mustela_putorius_furo
ENSRNOG00000001080	Arl6ip4	87	83.000	ENSNGAG00000023492	Arl6ip4	85	85.714	Nannospalax_galili
ENSRNOG00000001080	Arl6ip4	87	74.146	ENSNLEG00000002378	-	85	74.129	Nomascus_leucogenys
ENSRNOG00000001080	Arl6ip4	90	79.621	ENSODEG00000010162	-	85	80.303	Octodon_degus
ENSRNOG00000001080	Arl6ip4	90	75.120	ENSOGAG00000015951	-	68	78.495	Otolemur_garnettii
ENSRNOG00000001080	Arl6ip4	87	75.238	ENSOARG00000007010	ARL6IP4	65	78.155	Ovis_aries
ENSRNOG00000001080	Arl6ip4	90	81.991	ENSPPRG00000003154	-	85	82.828	Panthera_pardus
ENSRNOG00000001080	Arl6ip4	90	77.465	ENSPTIG00000020573	-	85	79.000	Panthera_tigris_altaica
ENSRNOG00000001080	Arl6ip4	83	77.083	ENSPANG00000029614	-	85	79.793	Papio_anubis
ENSRNOG00000001080	Arl6ip4	100	87.879	ENSPEMG00000008921	Arl6ip4	100	86.147	Peromyscus_maniculatus_bairdii
ENSRNOG00000001080	Arl6ip4	80	59.043	ENSPCIG00000003197	-	67	61.453	Phascolarctos_cinereus
ENSRNOG00000001080	Arl6ip4	90	83.732	ENSPCOG00000018734	-	85	84.694	Propithecus_coquereli
ENSRNOG00000001080	Arl6ip4	87	78.218	ENSSBOG00000033244	-	85	78.283	Saimiri_boliviensis_boliviensis
ENSRNOG00000001080	Arl6ip4	87	76.190	ENSSSCG00000009782	-	86	79.126	Sus_scrofa
ENSRNOG00000001080	Arl6ip4	86	75.253	ENSTBEG00000000080	ARL6IP4	61	74.510	Tupaia_belangeri
ENSRNOG00000001080	Arl6ip4	90	78.571	ENSUAMG00000000545	-	85	79.188	Ursus_americanus
ENSRNOG00000001080	Arl6ip4	90	78.095	ENSUMAG00000004427	-	85	78.680	Ursus_maritimus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005730	nucleolus	-	IEA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process
GO:0016607	nuclear speck	-	IEA	Component