EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000001106 (Gene tree)
Gene ID: 687565
Gene Symbol: Denr
Alias: LOC687565
Full Name: density regulated reinitiation and release factor
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 20886 bases
Position: chr12:38096034-38116919
Accession: 1584200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001467	SUI1	PF01253.22	6.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000001467	-	582	XM_008769260	ENSRNOP00000001467	194 (aa)	XP_008767482	D3ZU54

Gene Model

Click here to download ENSRNOG00000001106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000001106's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000001106	Denr	100	92.424	ENSG00000139726	DENR	100	92.424	Homo_sapiens
ENSRNOG00000001106	Denr	100	75.127	ENSAPOG00000021065	denr	100	75.127	Acanthochromis_polyacanthus
ENSRNOG00000001106	Denr	100	87.192	ENSAMEG00000014851	DENR	99	87.192	Ailuropoda_melanoleuca
ENSRNOG00000001106	Denr	93	79.121	ENSACIG00000007705	denr	100	75.253	Amphilophus_citrinellus
ENSRNOG00000001106	Denr	100	75.127	ENSAOCG00000004767	denr	100	75.127	Amphiprion_ocellaris
ENSRNOG00000001106	Denr	100	75.127	ENSAPEG00000006323	denr	100	75.127	Amphiprion_percula
ENSRNOG00000001106	Denr	100	74.242	ENSATEG00000004198	denr	100	74.242	Anabas_testudineus
ENSRNOG00000001106	Denr	100	84.848	ENSAPLG00000003750	DENR	99	84.848	Anas_platyrhynchos
ENSRNOG00000001106	Denr	99	86.010	ENSACAG00000016012	DENR	95	88.710	Anolis_carolinensis
ENSRNOG00000001106	Denr	100	71.717	ENSANAG00000011753	-	99	71.717	Aotus_nancymaae
ENSRNOG00000001106	Denr	100	92.929	ENSANAG00000033479	-	100	92.929	Aotus_nancymaae
ENSRNOG00000001106	Denr	100	75.127	ENSACLG00000024786	denr	100	75.127	Astatotilapia_calliptera
ENSRNOG00000001106	Denr	100	75.622	ENSAMXG00000019387	denr	100	76.617	Astyanax_mexicanus
ENSRNOG00000001106	Denr	100	89.394	ENSBTAG00000049723	DENR	100	89.394	Bos_taurus
ENSRNOG00000001106	Denr	100	89.394	ENSBTAG00000032433	DENR	100	89.394	Bos_taurus
ENSRNOG00000001106	Denr	89	44.186	WBGene00012932	Y47D3A.21	89	44.022	Caenorhabditis_elegans
ENSRNOG00000001106	Denr	100	92.929	ENSCJAG00000020488	DENR	100	92.929	Callithrix_jacchus
ENSRNOG00000001106	Denr	78	79.355	ENSCJAG00000042372	-	95	79.355	Callithrix_jacchus
ENSRNOG00000001106	Denr	100	89.899	ENSCAFG00000032380	DENR	72	89.899	Canis_familiaris
ENSRNOG00000001106	Denr	100	89.899	ENSCAFG00020016334	DENR	100	89.899	Canis_lupus_dingo
ENSRNOG00000001106	Denr	100	89.394	ENSCHIG00000025489	DENR	100	89.394	Capra_hircus
ENSRNOG00000001106	Denr	100	88.889	ENSTSYG00000035451	-	100	88.889	Carlito_syrichta
ENSRNOG00000001106	Denr	100	91.414	ENSTSYG00000028003	-	100	91.414	Carlito_syrichta
ENSRNOG00000001106	Denr	84	90.741	ENSCAPG00000002873	DENR	100	90.741	Cavia_aperea
ENSRNOG00000001106	Denr	100	90.404	ENSCPOG00000031356	DENR	100	90.404	Cavia_porcellus
ENSRNOG00000001106	Denr	100	78.351	ENSCCAG00000026516	-	100	78.351	Cebus_capucinus
ENSRNOG00000001106	Denr	99	76.166	ENSCCAG00000033248	-	100	77.202	Cebus_capucinus
ENSRNOG00000001106	Denr	100	91.919	ENSCATG00000032375	-	100	91.919	Cercocebus_atys
ENSRNOG00000001106	Denr	100	88.384	ENSCLAG00000014586	DENR	100	88.384	Chinchilla_lanigera
ENSRNOG00000001106	Denr	78	94.079	ENSCSAG00000002095	DENR	100	94.079	Chlorocebus_sabaeus
ENSRNOG00000001106	Denr	100	77.387	ENSCHOG00000011505	DENR	100	77.387	Choloepus_hoffmanni
ENSRNOG00000001106	Denr	100	86.869	ENSCPBG00000026018	DENR	100	86.869	Chrysemys_picta_bellii
ENSRNOG00000001106	Denr	89	52.874	ENSCING00000022096	-	85	52.874	Ciona_intestinalis
ENSRNOG00000001106	Denr	94	47.568	ENSCSAVG00000008066	-	90	48.087	Ciona_savignyi
ENSRNOG00000001106	Denr	100	90.404	ENSCGRG00001022427	Denr	100	90.404	Cricetulus_griseus_chok1gshd
ENSRNOG00000001106	Denr	100	90.404	ENSCGRG00000014376	Denr	100	90.404	Cricetulus_griseus_crigri
ENSRNOG00000001106	Denr	100	75.500	ENSCSEG00000012090	denr	100	75.500	Cynoglossus_semilaevis
ENSRNOG00000001106	Denr	100	77.500	ENSCVAG00000006732	denr	100	77.157	Cyprinodon_variegatus
ENSRNOG00000001106	Denr	100	72.596	ENSDARG00000037229	denr	100	74.038	Danio_rerio
ENSRNOG00000001106	Denr	78	94.737	ENSDNOG00000001447	DENR	100	94.737	Dasypus_novemcinctus
ENSRNOG00000001106	Denr	100	87.879	ENSDNOG00000036413	-	100	87.879	Dasypus_novemcinctus
ENSRNOG00000001106	Denr	89	49.133	FBgn0030802	DENR	87	49.133	Drosophila_melanogaster
ENSRNOG00000001106	Denr	100	70.854	ENSETEG00000013029	DENR	100	70.854	Echinops_telfairi
ENSRNOG00000001106	Denr	100	89.899	ENSEASG00005012513	DENR	100	89.899	Equus_asinus_asinus
ENSRNOG00000001106	Denr	100	89.899	ENSECAG00000021824	DENR	72	89.899	Equus_caballus
ENSRNOG00000001106	Denr	100	74.257	ENSELUG00000002656	denr	100	74.257	Esox_lucius
ENSRNOG00000001106	Denr	100	89.899	ENSFCAG00000006126	DENR	100	89.899	Felis_catus
ENSRNOG00000001106	Denr	100	83.500	ENSFALG00000009235	DENR	100	84.000	Ficedula_albicollis
ENSRNOG00000001106	Denr	100	90.909	ENSFDAG00000016899	-	100	90.909	Fukomys_damarensis
ENSRNOG00000001106	Denr	100	70.707	ENSFDAG00000018403	-	100	70.707	Fukomys_damarensis
ENSRNOG00000001106	Denr	100	78.173	ENSFHEG00000007729	denr	100	78.680	Fundulus_heteroclitus
ENSRNOG00000001106	Denr	99	73.232	ENSGMOG00000017892	denr	99	73.737	Gadus_morhua
ENSRNOG00000001106	Denr	100	85.354	ENSGALG00000003795	DENR	100	85.354	Gallus_gallus
ENSRNOG00000001106	Denr	100	75.758	ENSGAFG00000004297	denr	100	75.758	Gambusia_affinis
ENSRNOG00000001106	Denr	100	74.000	ENSGACG00000015614	denr	100	74.500	Gasterosteus_aculeatus
ENSRNOG00000001106	Denr	100	86.869	ENSGAGG00000023819	DENR	100	86.869	Gopherus_agassizii
ENSRNOG00000001106	Denr	100	92.424	ENSGGOG00000005562	DENR	100	92.424	Gorilla_gorilla
ENSRNOG00000001106	Denr	100	76.500	ENSHBUG00000011606	denr	100	76.500	Haplochromis_burtoni
ENSRNOG00000001106	Denr	100	90.909	ENSHGLG00000009606	DENR	100	90.909	Heterocephalus_glaber_female
ENSRNOG00000001106	Denr	100	90.909	ENSHGLG00100019201	DENR	100	90.909	Heterocephalus_glaber_male
ENSRNOG00000001106	Denr	100	74.490	ENSHCOG00000003310	denr	100	74.490	Hippocampus_comes
ENSRNOG00000001106	Denr	99	75.243	ENSIPUG00000016199	denr	99	75.243	Ictalurus_punctatus
ENSRNOG00000001106	Denr	100	92.424	ENSSTOG00000014128	DENR	100	92.424	Ictidomys_tridecemlineatus
ENSRNOG00000001106	Denr	100	91.414	ENSJJAG00000012558	-	100	91.414	Jaculus_jaculus
ENSRNOG00000001106	Denr	78	85.350	ENSJJAG00000013822	-	92	85.350	Jaculus_jaculus
ENSRNOG00000001106	Denr	100	89.175	ENSJJAG00000008721	-	100	89.175	Jaculus_jaculus
ENSRNOG00000001106	Denr	96	79.679	ENSKMAG00000008452	denr	96	80.214	Kryptolebias_marmoratus
ENSRNOG00000001106	Denr	90	82.584	ENSLBEG00000021674	denr	100	77.000	Labrus_bergylta
ENSRNOG00000001106	Denr	66	85.938	ENSLACG00000022178	DENR	96	85.938	Latimeria_chalumnae
ENSRNOG00000001106	Denr	100	79.798	ENSLOCG00000005501	denr	100	80.303	Lepisosteus_oculatus
ENSRNOG00000001106	Denr	100	88.000	ENSLAFG00000031728	DENR	100	88.000	Loxodonta_africana
ENSRNOG00000001106	Denr	100	91.919	ENSMFAG00000038312	DENR	100	91.919	Macaca_fascicularis
ENSRNOG00000001106	Denr	100	91.919	ENSMMUG00000046801	DENR	100	91.919	Macaca_mulatta
ENSRNOG00000001106	Denr	79	69.935	ENSMNEG00000030944	-	99	66.839	Macaca_nemestrina
ENSRNOG00000001106	Denr	100	92.424	ENSMNEG00000034844	-	100	91.919	Macaca_nemestrina
ENSRNOG00000001106	Denr	100	91.919	ENSMLEG00000032214	DENR	100	91.919	Mandrillus_leucophaeus
ENSRNOG00000001106	Denr	93	79.006	ENSMAMG00000011386	denr	100	75.127	Mastacembelus_armatus
ENSRNOG00000001106	Denr	100	75.127	ENSMZEG00005007982	denr	100	75.127	Maylandia_zebra
ENSRNOG00000001106	Denr	100	85.354	ENSMGAG00000003720	DENR	99	85.354	Meleagris_gallopavo
ENSRNOG00000001106	Denr	100	77.778	ENSMAUG00000020940	Denr	100	77.778	Mesocricetus_auratus
ENSRNOG00000001106	Denr	100	92.424	ENSMICG00000046263	DENR	100	92.424	Microcebus_murinus
ENSRNOG00000001106	Denr	100	91.919	ENSMOCG00000019231	Denr	100	91.919	Microtus_ochrogaster
ENSRNOG00000001106	Denr	99	71.875	ENSMMOG00000009357	denr	98	71.875	Mola_mola
ENSRNOG00000001106	Denr	100	87.374	ENSMODG00000012302	DENR	100	87.374	Monodelphis_domestica
ENSRNOG00000001106	Denr	93	81.768	ENSMALG00000018416	denr	100	77.665	Monopterus_albus
ENSRNOG00000001106	Denr	100	93.434	MGP_CAROLIEiJ_G0027737	Denr	100	93.434	Mus_caroli
ENSRNOG00000001106	Denr	100	93.434	ENSMUSG00000023106	Denr	100	93.434	Mus_musculus
ENSRNOG00000001106	Denr	100	92.424	MGP_PahariEiJ_G0024317	Denr	100	92.424	Mus_pahari
ENSRNOG00000001106	Denr	100	93.434	MGP_SPRETEiJ_G0028735	Denr	100	93.434	Mus_spretus
ENSRNOG00000001106	Denr	100	88.000	ENSMPUG00000001826	DENR	73	88.000	Mustela_putorius_furo
ENSRNOG00000001106	Denr	100	87.500	ENSMLUG00000002088	DENR	100	87.500	Myotis_lucifugus
ENSRNOG00000001106	Denr	100	91.919	ENSNGAG00000013775	Denr	100	91.919	Nannospalax_galili
ENSRNOG00000001106	Denr	100	77.665	ENSNBRG00000018898	denr	100	77.665	Neolamprologus_brichardi
ENSRNOG00000001106	Denr	100	92.424	ENSNLEG00000029880	DENR	100	92.424	Nomascus_leucogenys
ENSRNOG00000001106	Denr	100	67.677	ENSODEG00000006563	-	100	67.677	Octodon_degus
ENSRNOG00000001106	Denr	99	85.859	ENSODEG00000009408	-	98	85.859	Octodon_degus
ENSRNOG00000001106	Denr	100	75.253	ENSODEG00000005378	-	100	78.283	Octodon_degus
ENSRNOG00000001106	Denr	100	76.000	ENSONIG00000015319	denr	100	76.000	Oreochromis_niloticus
ENSRNOG00000001106	Denr	100	86.000	ENSOANG00000011417	-	100	86.000	Ornithorhynchus_anatinus
ENSRNOG00000001106	Denr	100	90.404	ENSOCUG00000008150	-	100	90.404	Oryctolagus_cuniculus
ENSRNOG00000001106	Denr	95	79.348	ENSOCUG00000027291	-	97	79.348	Oryctolagus_cuniculus
ENSRNOG00000001106	Denr	100	74.227	ENSORLG00000001495	denr	100	74.742	Oryzias_latipes
ENSRNOG00000001106	Denr	100	74.227	ENSORLG00020015485	denr	100	74.742	Oryzias_latipes_hni
ENSRNOG00000001106	Denr	100	73.846	ENSORLG00015002890	denr	100	74.359	Oryzias_latipes_hsok
ENSRNOG00000001106	Denr	100	74.227	ENSOMEG00000021836	denr	100	74.742	Oryzias_melastigma
ENSRNOG00000001106	Denr	100	91.919	ENSOGAG00000012426	DENR	100	91.919	Otolemur_garnettii
ENSRNOG00000001106	Denr	100	87.192	ENSOARG00000008511	DENR	99	87.192	Ovis_aries
ENSRNOG00000001106	Denr	100	87.864	ENSPPAG00000031425	DENR	100	87.864	Pan_paniscus
ENSRNOG00000001106	Denr	100	89.899	ENSPPRG00000009664	-	100	89.899	Panthera_pardus
ENSRNOG00000001106	Denr	100	64.433	ENSPPRG00000020005	-	100	64.433	Panthera_pardus
ENSRNOG00000001106	Denr	100	89.394	ENSPTIG00000014761	-	100	89.394	Panthera_tigris_altaica
ENSRNOG00000001106	Denr	96	68.617	ENSPTIG00000021643	-	90	77.515	Panthera_tigris_altaica
ENSRNOG00000001106	Denr	100	92.424	ENSPTRG00000005584	DENR	100	92.424	Pan_troglodytes
ENSRNOG00000001106	Denr	84	94.479	ENSPANG00000035364	-	100	94.479	Papio_anubis
ENSRNOG00000001106	Denr	100	91.919	ENSPANG00000030074	-	100	91.919	Papio_anubis
ENSRNOG00000001106	Denr	100	75.758	ENSPKIG00000001107	denr	100	73.367	Paramormyrops_kingsleyae
ENSRNOG00000001106	Denr	100	85.859	ENSPSIG00000008249	DENR	95	85.859	Pelodiscus_sinensis
ENSRNOG00000001106	Denr	75	78.767	ENSPMGG00000017214	denr	61	78.767	Periophthalmus_magnuspinnatus
ENSRNOG00000001106	Denr	100	91.414	ENSPEMG00000006521	-	100	91.414	Peromyscus_maniculatus_bairdii
ENSRNOG00000001106	Denr	91	65.363	ENSPMAG00000008589	denr	94	66.480	Petromyzon_marinus
ENSRNOG00000001106	Denr	100	88.384	ENSPCIG00000022523	DENR	100	88.384	Phascolarctos_cinereus
ENSRNOG00000001106	Denr	100	79.695	ENSPFOG00000023419	denr	100	79.695	Poecilia_formosa
ENSRNOG00000001106	Denr	100	79.695	ENSPLAG00000014807	denr	100	79.695	Poecilia_latipinna
ENSRNOG00000001106	Denr	100	74.384	ENSPMEG00000020699	denr	100	74.384	Poecilia_mexicana
ENSRNOG00000001106	Denr	100	79.695	ENSPREG00000016795	denr	100	79.695	Poecilia_reticulata
ENSRNOG00000001106	Denr	100	84.925	ENSPCAG00000012039	DENR	100	84.925	Procavia_capensis
ENSRNOG00000001106	Denr	100	92.424	ENSPCOG00000015933	DENR	100	92.424	Propithecus_coquereli
ENSRNOG00000001106	Denr	100	87.437	ENSPVAG00000001291	DENR	100	87.437	Pteropus_vampyrus
ENSRNOG00000001106	Denr	100	77.665	ENSPNYG00000003833	denr	100	77.665	Pundamilia_nyererei
ENSRNOG00000001106	Denr	100	75.000	ENSPNAG00000021662	denr	100	75.000	Pygocentrus_nattereri
ENSRNOG00000001106	Denr	100	72.222	ENSRBIG00000041357	DENR	100	72.222	Rhinopithecus_bieti
ENSRNOG00000001106	Denr	100	91.919	ENSRROG00000044446	DENR	100	91.919	Rhinopithecus_roxellana
ENSRNOG00000001106	Denr	74	32.278	YJR014W	TMA22	80	32.278	Saccharomyces_cerevisiae
ENSRNOG00000001106	Denr	77	89.610	ENSSBOG00000030149	-	87	89.610	Saimiri_boliviensis_boliviensis
ENSRNOG00000001106	Denr	99	62.437	ENSSBOG00000024171	-	100	62.500	Saimiri_boliviensis_boliviensis
ENSRNOG00000001106	Denr	99	85.859	ENSSHAG00000012064	DENR	99	85.859	Sarcophilus_harrisii
ENSRNOG00000001106	Denr	100	78.788	ENSSFOG00015018494	denr	100	78.788	Scleropages_formosus
ENSRNOG00000001106	Denr	90	80.571	ENSSMAG00000010563	denr	95	75.661	Scophthalmus_maximus
ENSRNOG00000001106	Denr	100	76.000	ENSSDUG00000023551	denr	100	76.000	Seriola_dumerili
ENSRNOG00000001106	Denr	100	75.500	ENSSLDG00000011430	denr	100	75.500	Seriola_lalandi_dorsalis
ENSRNOG00000001106	Denr	80	94.231	ENSSARG00000004446	DENR	100	94.231	Sorex_araneus
ENSRNOG00000001106	Denr	100	86.364	ENSSPUG00000012205	DENR	100	86.364	Sphenodon_punctatus
ENSRNOG00000001106	Denr	100	77.000	ENSSPAG00000019529	denr	100	77.000	Stegastes_partitus
ENSRNOG00000001106	Denr	100	89.394	ENSSSCG00000009788	-	100	89.394	Sus_scrofa
ENSRNOG00000001106	Denr	100	80.808	ENSTGUG00000005674	DENR	100	81.910	Taeniopygia_guttata
ENSRNOG00000001106	Denr	100	72.081	ENSTRUG00000020621	denr	100	72.081	Takifugu_rubripes
ENSRNOG00000001106	Denr	100	77.157	ENSTNIG00000013510	denr	99	77.157	Tetraodon_nigroviridis
ENSRNOG00000001106	Denr	100	71.357	ENSTTRG00000015856	DENR	100	71.357	Tursiops_truncatus
ENSRNOG00000001106	Denr	100	89.394	ENSUAMG00000003667	-	100	89.394	Ursus_americanus
ENSRNOG00000001106	Denr	100	52.821	ENSUAMG00000011200	-	100	52.821	Ursus_americanus
ENSRNOG00000001106	Denr	100	89.394	ENSUMAG00000005166	-	100	89.394	Ursus_maritimus
ENSRNOG00000001106	Denr	100	52.821	ENSUMAG00000023866	-	100	52.821	Ursus_maritimus
ENSRNOG00000001106	Denr	100	68.293	ENSVPAG00000011472	DENR	100	68.293	Vicugna_pacos
ENSRNOG00000001106	Denr	100	89.899	ENSVVUG00000028097	DENR	72	89.899	Vulpes_vulpes
ENSRNOG00000001106	Denr	100	81.218	ENSXETG00000005791	denr	99	81.218	Xenopus_tropicalis
ENSRNOG00000001106	Denr	100	73.096	ENSXCOG00000017611	denr	100	73.096	Xiphophorus_couchianus
ENSRNOG00000001106	Denr	100	79.188	ENSXMAG00000019247	denr	100	79.188	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001731	formation of translation preinitiation complex	-	ISO	Process
GO:0003743	translation initiation factor activity	-	IEA	Function
GO:0032790	ribosome disassembly	-	IEA	Process
GO:0032790	ribosome disassembly	-	ISO	Process
GO:0075522	IRES-dependent viral translational initiation	-	IEA	Process
GO:0075522	IRES-dependent viral translational initiation	-	ISO	Process