EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSRNOG00000001141 (Gene tree)
Gene ID: -
Gene Symbol: Srrm4
Alias: LOC498189|RGD1560213
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 155437 bases
Position: chr12:45727112-45882548
Accession: 1560213
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001507	SRRM_C	PF15230.6	1.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000001507	-	1806	-	ENSRNOP00000001507	602 (aa)	-	F1M2T7

Gene Model

Click here to download ENSRNOG00000001141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000001141's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000001141	Srrm4	86	85.632	ENSG00000139767	SRRM4	85	86.346	Homo_sapiens
ENSRNOG00000001141	Srrm4	66	53.846	ENSAPLG00000009202	SRRM4	67	51.852	Anas_platyrhynchos
ENSRNOG00000001141	Srrm4	86	46.916	ENSACAG00000004139	SRRM4	88	50.746	Anolis_carolinensis
ENSRNOG00000001141	Srrm4	84	67.525	ENSANAG00000020333	SRRM4	83	66.799	Aotus_nancymaae
ENSRNOG00000001141	Srrm4	86	80.460	ENSBTAG00000008676	SRRM4	86	82.308	Bos_taurus
ENSRNOG00000001141	Srrm4	86	86.015	ENSCJAG00000009146	SRRM4	85	86.731	Callithrix_jacchus
ENSRNOG00000001141	Srrm4	86	82.500	ENSCAFG00000023113	SRRM4	85	84.615	Canis_familiaris
ENSRNOG00000001141	Srrm4	52	84.494	ENSCAFG00020018665	SRRM4	55	84.494	Canis_lupus_dingo
ENSRNOG00000001141	Srrm4	86	66.667	ENSCHIG00000019151	SRRM4	85	65.966	Capra_hircus
ENSRNOG00000001141	Srrm4	79	83.716	ENSTSYG00000012239	SRRM4	84	84.486	Carlito_syrichta
ENSRNOG00000001141	Srrm4	84	76.817	ENSCAPG00000008729	SRRM4	88	85.591	Cavia_aperea
ENSRNOG00000001141	Srrm4	86	85.605	ENSCPOG00000003544	SRRM4	85	86.320	Cavia_porcellus
ENSRNOG00000001141	Srrm4	86	85.441	ENSCCAG00000022479	SRRM4	85	86.154	Cebus_capucinus
ENSRNOG00000001141	Srrm4	86	84.866	ENSCATG00000036343	SRRM4	85	85.577	Cercocebus_atys
ENSRNOG00000001141	Srrm4	86	86.731	ENSCLAG00000009764	SRRM4	85	87.476	Chinchilla_lanigera
ENSRNOG00000001141	Srrm4	86	85.249	ENSCSAG00000002300	SRRM4	85	85.962	Chlorocebus_sabaeus
ENSRNOG00000001141	Srrm4	52	59.649	ENSCPBG00000012293	SRRM4	65	58.374	Chrysemys_picta_bellii
ENSRNOG00000001141	Srrm4	86	82.308	ENSCANG00000031719	SRRM4	85	82.819	Colobus_angolensis_palliatus
ENSRNOG00000001141	Srrm4	86	91.473	ENSCGRG00001000544	Srrm4	86	94.186	Cricetulus_griseus_chok1gshd
ENSRNOG00000001141	Srrm4	86	86.486	ENSCGRG00000006973	Srrm4	100	96.522	Cricetulus_griseus_crigri
ENSRNOG00000001141	Srrm4	86	81.453	ENSDNOG00000000260	SRRM4	88	81.888	Dasypus_novemcinctus
ENSRNOG00000001141	Srrm4	86	76.583	ENSDORG00000015243	Srrm4	87	76.448	Dipodomys_ordii
ENSRNOG00000001141	Srrm4	85	82.012	ENSEASG00005008759	SRRM4	87	83.462	Equus_asinus_asinus
ENSRNOG00000001141	Srrm4	85	81.818	ENSECAG00000021729	SRRM4	87	83.269	Equus_caballus
ENSRNOG00000001141	Srrm4	85	85.300	ENSFCAG00000010536	SRRM4	83	86.154	Felis_catus
ENSRNOG00000001141	Srrm4	85	83.752	ENSFDAG00000007218	SRRM4	85	84.038	Fukomys_damarensis
ENSRNOG00000001141	Srrm4	86	85.824	ENSGGOG00000005338	SRRM4	85	86.538	Gorilla_gorilla
ENSRNOG00000001141	Srrm4	85	83.205	ENSHGLG00000007830	SRRM4	86	85.192	Heterocephalus_glaber_female
ENSRNOG00000001141	Srrm4	51	80.000	ENSHGLG00100008549	SRRM4	90	73.967	Heterocephalus_glaber_male
ENSRNOG00000001141	Srrm4	79	75.000	ENSSTOG00000026642	SRRM4	83	75.158	Ictidomys_tridecemlineatus
ENSRNOG00000001141	Srrm4	83	76.892	ENSJJAG00000016448	Srrm4	81	81.971	Jaculus_jaculus
ENSRNOG00000001141	Srrm4	85	84.109	ENSLAFG00000003731	SRRM4	84	83.205	Loxodonta_africana
ENSRNOG00000001141	Srrm4	86	85.441	ENSMFAG00000041271	SRRM4	84	86.154	Macaca_fascicularis
ENSRNOG00000001141	Srrm4	85	72.394	ENSMMUG00000021230	SRRM4	67	74.707	Macaca_mulatta
ENSRNOG00000001141	Srrm4	86	85.249	ENSMNEG00000044154	SRRM4	84	85.962	Macaca_nemestrina
ENSRNOG00000001141	Srrm4	86	85.632	ENSMLEG00000034455	SRRM4	85	86.346	Mandrillus_leucophaeus
ENSRNOG00000001141	Srrm4	85	59.398	ENSMGAG00000009082	SRRM4	65	57.960	Meleagris_gallopavo
ENSRNOG00000001141	Srrm4	86	90.698	ENSMAUG00000013203	Srrm4	86	93.411	Mesocricetus_auratus
ENSRNOG00000001141	Srrm4	86	85.057	ENSMICG00000012386	SRRM4	85	85.769	Microcebus_murinus
ENSRNOG00000001141	Srrm4	86	89.729	ENSMOCG00000006737	Srrm4	86	92.248	Microtus_ochrogaster
ENSRNOG00000001141	Srrm4	85	56.738	ENSMODG00000015283	SRRM4	86	55.417	Monodelphis_domestica
ENSRNOG00000001141	Srrm4	100	96.865	MGP_CAROLIEiJ_G0027638	Srrm4	100	96.865	Mus_caroli
ENSRNOG00000001141	Srrm4	100	95.888	ENSMUSG00000063919	Srrm4	100	95.888	Mus_musculus
ENSRNOG00000001141	Srrm4	86	95.543	MGP_PahariEiJ_G0024219	Srrm4	85	95.543	Mus_pahari
ENSRNOG00000001141	Srrm4	100	95.902	MGP_SPRETEiJ_G0028637	Srrm4	100	95.902	Mus_spretus
ENSRNOG00000001141	Srrm4	85	82.398	ENSMPUG00000002930	SRRM4	86	84.615	Mustela_putorius_furo
ENSRNOG00000001141	Srrm4	86	86.233	ENSNGAG00000020807	Srrm4	86	87.716	Nannospalax_galili
ENSRNOG00000001141	Srrm4	86	85.632	ENSNLEG00000000200	SRRM4	85	86.346	Nomascus_leucogenys
ENSRNOG00000001141	Srrm4	50	83.871	ENSMEUG00000010419	-	50	85.714	Notamacropus_eugenii
ENSRNOG00000001141	Srrm4	85	77.143	ENSOPRG00000016981	SRRM4	77	76.136	Ochotona_princeps
ENSRNOG00000001141	Srrm4	86	85.934	ENSODEG00000006291	SRRM4	85	86.705	Octodon_degus
ENSRNOG00000001141	Srrm4	85	84.749	ENSOCUG00000004503	SRRM4	77	83.109	Oryctolagus_cuniculus
ENSRNOG00000001141	Srrm4	86	84.674	ENSOGAG00000015431	SRRM4	85	85.385	Otolemur_garnettii
ENSRNOG00000001141	Srrm4	86	82.759	ENSOARG00000002063	SRRM4	86	83.654	Ovis_aries
ENSRNOG00000001141	Srrm4	79	85.146	ENSPPAG00000028134	SRRM4	84	85.924	Pan_paniscus
ENSRNOG00000001141	Srrm4	85	84.913	ENSPPRG00000002659	SRRM4	84	85.769	Panthera_pardus
ENSRNOG00000001141	Srrm4	86	85.824	ENSPTRG00000005517	SRRM4	85	86.538	Pan_troglodytes
ENSRNOG00000001141	Srrm4	86	85.249	ENSPANG00000022544	SRRM4	99	85.686	Papio_anubis
ENSRNOG00000001141	Srrm4	86	92.070	ENSPEMG00000001823	Srrm4	86	94.584	Peromyscus_maniculatus_bairdii
ENSRNOG00000001141	Srrm4	79	76.050	ENSPCAG00000016401	SRRM4	68	74.895	Procavia_capensis
ENSRNOG00000001141	Srrm4	86	85.249	ENSPCOG00000013803	SRRM4	86	85.962	Propithecus_coquereli
ENSRNOG00000001141	Srrm4	79	83.891	ENSPVAG00000017487	SRRM4	85	84.874	Pteropus_vampyrus
ENSRNOG00000001141	Srrm4	56	84.320	ENSRBIG00000040107	SRRM4	80	74.105	Rhinopithecus_bieti
ENSRNOG00000001141	Srrm4	56	85.503	ENSRROG00000035868	SRRM4	80	74.737	Rhinopithecus_roxellana
ENSRNOG00000001141	Srrm4	86	78.544	ENSSBOG00000035310	SRRM4	85	79.231	Saimiri_boliviensis_boliviensis
ENSRNOG00000001141	Srrm4	78	66.132	ENSSHAG00000017330	SRRM4	87	62.048	Sarcophilus_harrisii
ENSRNOG00000001141	Srrm4	63	77.603	ENSSARG00000012647	SRRM4	84	65.756	Sorex_araneus
ENSRNOG00000001141	Srrm4	86	83.716	ENSSSCG00000009845	SRRM4	85	84.423	Sus_scrofa
ENSRNOG00000001141	Srrm4	64	55.471	ENSTGUG00000009228	SRRM4	91	55.701	Taeniopygia_guttata
ENSRNOG00000001141	Srrm4	76	85.517	ENSVPAG00000007937	SRRM4	71	83.969	Vicugna_pacos
ENSRNOG00000001141	Srrm4	55	51.051	ENSXETG00000019934	SRRM4	97	51.321	Xenopus_tropicalis