EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000001163 (Gene tree)
Gene ID: 288701
Gene Symbol: Srsf9
Alias: LOC288701|MGC105562|Sfrs9
Full Name: serine and arginine rich splicing factor 9
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 6307 bases
Position: chr12:47039716-47046022
Accession: 1309495
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001539	RRM_1	PF00076.22	1.9e-33	1	2
ENSRNOP00000001539	RRM_1	PF00076.22	1.9e-33	2	2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000001539	-	1096	-	ENSRNOP00000001539	221 (aa)	-	Q5PPI1

Gene Model

Click here to download ENSRNOG00000001163's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03040	Spliceosome	KEGG
rno05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000001163's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000001163	Srsf9	71	39.011	ENSRNOG00000006380	Srsf6	50	42.857
ENSRNOG00000001163	Srsf9	82	68.750	ENSRNOG00000050323	Srsf1	96	65.966
ENSRNOG00000001163	Srsf9	68	40.000	ENSRNOG00000005513	Srsf5	59	41.212

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000001163	Srsf9	100	97.285	ENSG00000111786	SRSF9	100	97.285	Homo_sapiens
ENSRNOG00000001163	Srsf9	80	71.038	ENSAPOG00000013728	srsf9	75	73.370	Acanthochromis_polyacanthus
ENSRNOG00000001163	Srsf9	97	97.209	ENSAMEG00000013294	SRSF9	100	97.209	Ailuropoda_melanoleuca
ENSRNOG00000001163	Srsf9	94	71.831	ENSACIG00000015765	srsf9	85	72.897	Amphilophus_citrinellus
ENSRNOG00000001163	Srsf9	80	72.131	ENSAOCG00000002992	srsf9	75	74.457	Amphiprion_ocellaris
ENSRNOG00000001163	Srsf9	85	68.205	ENSAPEG00000011908	srsf9	75	74.457	Amphiprion_percula
ENSRNOG00000001163	Srsf9	99	61.039	ENSATEG00000019984	srsf9	89	66.364	Anabas_testudineus
ENSRNOG00000001163	Srsf9	94	83.254	ENSACAG00000002877	SRSF9	87	86.047	Anolis_carolinensis
ENSRNOG00000001163	Srsf9	96	97.170	ENSANAG00000035910	SRSF9	96	97.170	Aotus_nancymaae
ENSRNOG00000001163	Srsf9	98	71.300	ENSACLG00000015678	srsf9	88	72.321	Astatotilapia_calliptera
ENSRNOG00000001163	Srsf9	94	70.370	ENSAMXG00000032281	srsf9	89	68.203	Astyanax_mexicanus
ENSRNOG00000001163	Srsf9	100	94.118	ENSBTAG00000005584	-	100	94.118	Bos_taurus
ENSRNOG00000001163	Srsf9	100	95.928	ENSBTAG00000012792	SRSF9	100	95.928	Bos_taurus
ENSRNOG00000001163	Srsf9	100	97.285	ENSCJAG00000001187	SRSF9	100	97.285	Callithrix_jacchus
ENSRNOG00000001163	Srsf9	100	97.285	ENSCAFG00000010314	SRSF9	100	97.285	Canis_familiaris
ENSRNOG00000001163	Srsf9	100	97.285	ENSCAFG00020020612	SRSF9	100	97.285	Canis_lupus_dingo
ENSRNOG00000001163	Srsf9	100	95.928	ENSCHIG00000025274	SRSF9	100	95.928	Capra_hircus
ENSRNOG00000001163	Srsf9	99	74.886	ENSTSYG00000029305	-	98	74.886	Carlito_syrichta
ENSRNOG00000001163	Srsf9	99	97.273	ENSTSYG00000006848	-	99	97.273	Carlito_syrichta
ENSRNOG00000001163	Srsf9	99	79.909	ENSTSYG00000034124	-	98	79.909	Carlito_syrichta
ENSRNOG00000001163	Srsf9	99	82.192	ENSTSYG00000036169	-	98	82.192	Carlito_syrichta
ENSRNOG00000001163	Srsf9	100	97.285	ENSCPOG00000033486	SRSF9	100	97.285	Cavia_porcellus
ENSRNOG00000001163	Srsf9	100	97.285	ENSCCAG00000036053	SRSF9	100	97.285	Cebus_capucinus
ENSRNOG00000001163	Srsf9	100	97.285	ENSCATG00000021315	SRSF9	100	97.285	Cercocebus_atys
ENSRNOG00000001163	Srsf9	89	79.082	ENSCATG00000000421	-	99	79.082	Cercocebus_atys
ENSRNOG00000001163	Srsf9	100	97.285	ENSCLAG00000012289	SRSF9	100	97.285	Chinchilla_lanigera
ENSRNOG00000001163	Srsf9	100	97.285	ENSCSAG00000002257	SRSF9	100	97.285	Chlorocebus_sabaeus
ENSRNOG00000001163	Srsf9	71	96.835	ENSCHOG00000009241	SRSF9	100	96.835	Choloepus_hoffmanni
ENSRNOG00000001163	Srsf9	94	86.667	ENSCPBG00000011340	SRSF9	100	83.262	Chrysemys_picta_bellii
ENSRNOG00000001163	Srsf9	91	97.015	ENSCANG00000034161	SRSF9	91	97.015	Colobus_angolensis_palliatus
ENSRNOG00000001163	Srsf9	100	97.285	ENSCGRG00001021965	Srsf9	100	97.285	Cricetulus_griseus_chok1gshd
ENSRNOG00000001163	Srsf9	55	88.430	ENSCGRG00000001879	Srsf9	77	88.430	Cricetulus_griseus_crigri
ENSRNOG00000001163	Srsf9	80	75.568	ENSCSEG00000015663	srsf9	91	69.307	Cynoglossus_semilaevis
ENSRNOG00000001163	Srsf9	94	64.352	ENSCVAG00000021417	srsf9	89	64.352	Cyprinodon_variegatus
ENSRNOG00000001163	Srsf9	90	70.673	ENSDARG00000008097	srsf9	89	67.580	Danio_rerio
ENSRNOG00000001163	Srsf9	100	97.738	ENSDNOG00000012598	SRSF9	100	97.738	Dasypus_novemcinctus
ENSRNOG00000001163	Srsf9	100	96.833	ENSDORG00000013162	Srsf9	100	96.833	Dipodomys_ordii
ENSRNOG00000001163	Srsf9	95	75.829	ENSETEG00000002606	SRSF9	98	75.829	Echinops_telfairi
ENSRNOG00000001163	Srsf9	100	97.738	ENSEASG00005004727	SRSF9	100	97.738	Equus_asinus_asinus
ENSRNOG00000001163	Srsf9	100	97.738	ENSECAG00000009116	SRSF9	100	97.738	Equus_caballus
ENSRNOG00000001163	Srsf9	100	69.683	ENSEEUG00000011655	SRSF9	100	69.683	Erinaceus_europaeus
ENSRNOG00000001163	Srsf9	94	67.421	ENSELUG00000021669	srsf9	89	67.117	Esox_lucius
ENSRNOG00000001163	Srsf9	91	71.782	ENSELUG00000012644	SRSF9	86	70.813	Esox_lucius
ENSRNOG00000001163	Srsf9	100	97.285	ENSFCAG00000011011	SRSF9	100	97.285	Felis_catus
ENSRNOG00000001163	Srsf9	56	86.992	ENSFDAG00000004364	SRSF9	77	88.430	Fukomys_damarensis
ENSRNOG00000001163	Srsf9	94	68.519	ENSFHEG00000020851	srsf9	90	65.278	Fundulus_heteroclitus
ENSRNOG00000001163	Srsf9	81	67.895	ENSGMOG00000007980	srsf9	89	62.222	Gadus_morhua
ENSRNOG00000001163	Srsf9	90	64.115	ENSGAFG00000009123	srsf9	97	66.986	Gambusia_affinis
ENSRNOG00000001163	Srsf9	90	62.727	ENSGACG00000016921	srsf9	89	62.445	Gasterosteus_aculeatus
ENSRNOG00000001163	Srsf9	94	86.190	ENSGAGG00000016015	SRSF9	100	82.833	Gopherus_agassizii
ENSRNOG00000001163	Srsf9	55	67.213	ENSGGOG00000022012	-	97	67.213	Gorilla_gorilla
ENSRNOG00000001163	Srsf9	100	76.233	ENSGGOG00000027142	-	99	76.233	Gorilla_gorilla
ENSRNOG00000001163	Srsf9	98	71.300	ENSHBUG00000019320	srsf9	88	73.832	Haplochromis_burtoni
ENSRNOG00000001163	Srsf9	100	97.285	ENSHGLG00000014372	SRSF9	100	97.285	Heterocephalus_glaber_female
ENSRNOG00000001163	Srsf9	82	87.912	ENSHGLG00000003582	-	90	87.912	Heterocephalus_glaber_female
ENSRNOG00000001163	Srsf9	100	97.285	ENSHGLG00100013695	SRSF9	100	97.285	Heterocephalus_glaber_male
ENSRNOG00000001163	Srsf9	83	86.957	ENSHGLG00100015198	-	90	86.957	Heterocephalus_glaber_male
ENSRNOG00000001163	Srsf9	80	47.368	ENSHCOG00000017311	srsf9	90	47.748	Hippocampus_comes
ENSRNOG00000001163	Srsf9	94	70.423	ENSIPUG00000005511	srsf9	89	69.159	Ictalurus_punctatus
ENSRNOG00000001163	Srsf9	100	97.738	ENSSTOG00000007344	SRSF9	100	97.738	Ictidomys_tridecemlineatus
ENSRNOG00000001163	Srsf9	100	95.475	ENSJJAG00000013374	Srsf9	100	95.475	Jaculus_jaculus
ENSRNOG00000001163	Srsf9	94	63.636	ENSKMAG00000007113	srsf9	89	65.753	Kryptolebias_marmoratus
ENSRNOG00000001163	Srsf9	95	64.186	ENSLBEG00000017430	srsf9	90	67.111	Labrus_bergylta
ENSRNOG00000001163	Srsf9	100	73.894	ENSLACG00000018228	SRSF9	99	76.211	Latimeria_chalumnae
ENSRNOG00000001163	Srsf9	91	72.683	ENSLOCG00000004044	srsf9	85	73.113	Lepisosteus_oculatus
ENSRNOG00000001163	Srsf9	79	95.977	ENSLAFG00000006381	SRSF9	99	95.977	Loxodonta_africana
ENSRNOG00000001163	Srsf9	85	96.791	ENSMFAG00000039423	SRSF9	100	96.791	Macaca_fascicularis
ENSRNOG00000001163	Srsf9	93	80.097	ENSMMUG00000040941	-	100	80.097	Macaca_mulatta
ENSRNOG00000001163	Srsf9	96	92.166	ENSMMUG00000016494	SRSF9	76	92.166	Macaca_mulatta
ENSRNOG00000001163	Srsf9	100	97.285	ENSMNEG00000044129	SRSF9	100	97.285	Macaca_nemestrina
ENSRNOG00000001163	Srsf9	94	97.115	ENSMLEG00000041155	SRSF9	100	97.115	Mandrillus_leucophaeus
ENSRNOG00000001163	Srsf9	94	69.444	ENSMAMG00000011581	srsf9	89	71.429	Mastacembelus_armatus
ENSRNOG00000001163	Srsf9	98	71.300	ENSMZEG00005018422	srsf9	88	72.321	Maylandia_zebra
ENSRNOG00000001163	Srsf9	100	96.380	ENSMAUG00000011403	Srsf9	100	96.380	Mesocricetus_auratus
ENSRNOG00000001163	Srsf9	100	97.285	ENSMICG00000008674	SRSF9	100	97.285	Microcebus_murinus
ENSRNOG00000001163	Srsf9	100	96.380	ENSMOCG00000021163	Srsf9	100	96.380	Microtus_ochrogaster
ENSRNOG00000001163	Srsf9	96	60.965	ENSMMOG00000009349	srsf9	90	62.185	Mola_mola
ENSRNOG00000001163	Srsf9	98	81.944	ENSMODG00000003146	SRSF9	99	84.259	Monodelphis_domestica
ENSRNOG00000001163	Srsf9	94	68.246	ENSMALG00000011678	srsf9	88	70.142	Monopterus_albus
ENSRNOG00000001163	Srsf9	99	97.273	MGP_CAROLIEiJ_G0027622	Srsf9	99	97.273	Mus_caroli
ENSRNOG00000001163	Srsf9	99	97.273	ENSMUSG00000029538	Srsf9	99	97.273	Mus_musculus
ENSRNOG00000001163	Srsf9	58	84.496	MGP_PahariEiJ_G0024202	-	80	86.508	Mus_pahari
ENSRNOG00000001163	Srsf9	99	97.273	MGP_SPRETEiJ_G0028620	Srsf9	99	97.273	Mus_spretus
ENSRNOG00000001163	Srsf9	100	96.413	ENSMPUG00000003193	SRSF9	99	96.413	Mustela_putorius_furo
ENSRNOG00000001163	Srsf9	100	95.964	ENSMLUG00000010346	SRSF9	99	95.964	Myotis_lucifugus
ENSRNOG00000001163	Srsf9	100	95.928	ENSNGAG00000012738	Srsf9	100	95.928	Nannospalax_galili
ENSRNOG00000001163	Srsf9	94	72.430	ENSNBRG00000003888	srsf9	88	73.832	Neolamprologus_brichardi
ENSRNOG00000001163	Srsf9	93	82.039	ENSNLEG00000033316	-	97	82.039	Nomascus_leucogenys
ENSRNOG00000001163	Srsf9	100	97.285	ENSNLEG00000015661	SRSF9	100	97.285	Nomascus_leucogenys
ENSRNOG00000001163	Srsf9	71	82.278	ENSMEUG00000004069	SRSF9	100	84.177	Notamacropus_eugenii
ENSRNOG00000001163	Srsf9	100	95.023	ENSOPRG00000004234	SRSF9	100	95.023	Ochotona_princeps
ENSRNOG00000001163	Srsf9	54	94.167	ENSODEG00000006061	SRSF9	98	94.167	Octodon_degus
ENSRNOG00000001163	Srsf9	94	72.430	ENSONIG00000013974	srsf9	89	73.832	Oreochromis_niloticus
ENSRNOG00000001163	Srsf9	100	96.833	ENSOCUG00000024603	SRSF9	100	96.833	Oryctolagus_cuniculus
ENSRNOG00000001163	Srsf9	94	63.134	ENSORLG00000023709	srsf9	89	65.138	Oryzias_latipes
ENSRNOG00000001163	Srsf9	94	63.134	ENSORLG00020017678	srsf9	89	65.138	Oryzias_latipes_hni
ENSRNOG00000001163	Srsf9	94	63.134	ENSORLG00015004857	srsf9	89	65.138	Oryzias_latipes_hsok
ENSRNOG00000001163	Srsf9	94	63.594	ENSOMEG00000002601	srsf9	89	64.679	Oryzias_melastigma
ENSRNOG00000001163	Srsf9	100	96.833	ENSOGAG00000003852	SRSF9	99	96.833	Otolemur_garnettii
ENSRNOG00000001163	Srsf9	96	95.283	ENSOARG00000012402	SRSF9	100	91.071	Ovis_aries
ENSRNOG00000001163	Srsf9	91	97.030	ENSPPAG00000034420	SRSF9	86	97.030	Pan_paniscus
ENSRNOG00000001163	Srsf9	55	73.770	ENSPPAG00000026547	-	97	73.770	Pan_paniscus
ENSRNOG00000001163	Srsf9	100	97.285	ENSPPRG00000001309	SRSF9	100	97.285	Panthera_pardus
ENSRNOG00000001163	Srsf9	71	96.203	ENSPTIG00000010327	SRSF9	71	96.203	Panthera_tigris_altaica
ENSRNOG00000001163	Srsf9	100	97.285	ENSPTRG00000005535	SRSF9	100	97.285	Pan_troglodytes
ENSRNOG00000001163	Srsf9	55	73.770	ENSPTRG00000052688	-	97	73.770	Pan_troglodytes
ENSRNOG00000001163	Srsf9	100	97.285	ENSPANG00000016072	SRSF9	100	97.285	Papio_anubis
ENSRNOG00000001163	Srsf9	90	72.059	ENSPKIG00000023787	srsf9	85	68.599	Paramormyrops_kingsleyae
ENSRNOG00000001163	Srsf9	83	69.519	ENSPKIG00000024851	SRSF9	85	65.116	Paramormyrops_kingsleyae
ENSRNOG00000001163	Srsf9	79	61.170	ENSPMGG00000016215	srsf9	75	62.032	Periophthalmus_magnuspinnatus
ENSRNOG00000001163	Srsf9	100	96.380	ENSPEMG00000016311	Srsf9	100	96.380	Peromyscus_maniculatus_bairdii
ENSRNOG00000001163	Srsf9	100	84.305	ENSPCIG00000025998	SRSF9	92	85.202	Phascolarctos_cinereus
ENSRNOG00000001163	Srsf9	79	68.817	ENSPFOG00000019792	srsf9	89	64.732	Poecilia_formosa
ENSRNOG00000001163	Srsf9	79	74.286	ENSPLAG00000022740	srsf9	88	66.038	Poecilia_latipinna
ENSRNOG00000001163	Srsf9	79	68.817	ENSPMEG00000008809	srsf9	89	64.732	Poecilia_mexicana
ENSRNOG00000001163	Srsf9	84	71.505	ENSPREG00000013165	srsf9	85	65.741	Poecilia_reticulata
ENSRNOG00000001163	Srsf9	100	97.285	ENSPPYG00000005031	-	100	97.285	Pongo_abelii
ENSRNOG00000001163	Srsf9	100	95.928	ENSPPYG00000019910	-	100	95.928	Pongo_abelii
ENSRNOG00000001163	Srsf9	100	94.118	ENSPPYG00000029896	-	100	94.118	Pongo_abelii
ENSRNOG00000001163	Srsf9	71	94.304	ENSPCAG00000013889	SRSF9	100	94.304	Procavia_capensis
ENSRNOG00000001163	Srsf9	100	97.285	ENSPCOG00000015115	SRSF9	100	97.285	Propithecus_coquereli
ENSRNOG00000001163	Srsf9	100	97.738	ENSPVAG00000002229	SRSF9	100	97.738	Pteropus_vampyrus
ENSRNOG00000001163	Srsf9	94	72.430	ENSPNYG00000008644	srsf9	88	73.832	Pundamilia_nyererei
ENSRNOG00000001163	Srsf9	90	72.059	ENSPNAG00000003588	srsf9	89	68.056	Pygocentrus_nattereri
ENSRNOG00000001163	Srsf9	83	85.792	ENSRBIG00000042683	SRSF9	94	85.792	Rhinopithecus_bieti
ENSRNOG00000001163	Srsf9	83	88.043	ENSRROG00000041980	SRSF9	95	88.764	Rhinopithecus_roxellana
ENSRNOG00000001163	Srsf9	50	96.396	ENSSBOG00000017305	SRSF9	86	96.396	Saimiri_boliviensis_boliviensis
ENSRNOG00000001163	Srsf9	72	81.366	ENSSHAG00000005685	SRSF9	100	84.472	Sarcophilus_harrisii
ENSRNOG00000001163	Srsf9	94	71.028	ENSSFOG00015017303	srsf9	84	69.565	Scleropages_formosus
ENSRNOG00000001163	Srsf9	94	71.698	ENSSFOG00015002476	SRSF9	84	72.816	Scleropages_formosus
ENSRNOG00000001163	Srsf9	99	68.722	ENSSMAG00000002039	srsf9	93	69.163	Scophthalmus_maximus
ENSRNOG00000001163	Srsf9	94	63.348	ENSSDUG00000018908	srsf9	89	66.667	Seriola_dumerili
ENSRNOG00000001163	Srsf9	99	61.638	ENSSLDG00000012305	srsf9	89	66.667	Seriola_lalandi_dorsalis
ENSRNOG00000001163	Srsf9	71	95.570	ENSSARG00000003434	SRSF9	100	95.570	Sorex_araneus
ENSRNOG00000001163	Srsf9	93	83.732	ENSSPUG00000015680	SRSF9	100	82.128	Sphenodon_punctatus
ENSRNOG00000001163	Srsf9	80	69.355	ENSSPAG00000006285	srsf9	76	72.727	Stegastes_partitus
ENSRNOG00000001163	Srsf9	100	66.516	ENSSSCG00000038585	-	100	66.968	Sus_scrofa
ENSRNOG00000001163	Srsf9	100	97.738	ENSSSCG00000009906	SRSF9	100	97.738	Sus_scrofa
ENSRNOG00000001163	Srsf9	80	48.958	ENSTRUG00000012723	srsf9	73	50.521	Takifugu_rubripes
ENSRNOG00000001163	Srsf9	80	75.568	ENSTNIG00000000697	srsf9	73	75.568	Tetraodon_nigroviridis
ENSRNOG00000001163	Srsf9	90	95.455	ENSTBEG00000008499	SRSF9	100	95.455	Tupaia_belangeri
ENSRNOG00000001163	Srsf9	89	96.954	ENSTTRG00000000145	SRSF9	100	96.954	Tursiops_truncatus
ENSRNOG00000001163	Srsf9	100	97.738	ENSUAMG00000015527	SRSF9	100	97.738	Ursus_americanus
ENSRNOG00000001163	Srsf9	77	89.266	ENSUMAG00000006151	SRSF9	83	84.574	Ursus_maritimus
ENSRNOG00000001163	Srsf9	84	65.946	ENSVPAG00000010361	SRSF9	100	65.946	Vicugna_pacos
ENSRNOG00000001163	Srsf9	100	97.285	ENSVVUG00000021065	SRSF9	100	97.285	Vulpes_vulpes
ENSRNOG00000001163	Srsf9	100	76.211	ENSXETG00000026940	srsf9	99	77.093	Xenopus_tropicalis
ENSRNOG00000001163	Srsf9	90	64.115	ENSXMAG00000001438	srsf9	98	66.986	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000381	regulation of alternative mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0005515	protein binding	9671816.11118435.	IPI	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0009636	response to toxic substance	23275536.	IEP	Process
GO:0016607	nuclear speck	21873635.	IBA	Component
GO:0019904	protein domain specific binding	-	IEA	Function
GO:0019904	protein domain specific binding	-	ISO	Function
GO:0043279	response to alkaloid	23275536.	IEP	Process
GO:0045292	mRNA cis splicing, via spliceosome	21873635.	IBA	Process
GO:0048025	negative regulation of mRNA splicing, via spliceosome	-	ISO	Process
GO:0048025	negative regulation of mRNA splicing, via spliceosome	-	ISS	Process