EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000001199 (Gene tree)
Gene ID: 117241
Gene Symbol: Pop5
Alias: Rnasep3|Rnasep3-pending|rpP2
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 4507 bases
Position: chr12:47138346-47142852
Accession: 1311819
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001591	RNase_P_Rpp14	PF01900.19	4e-25	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000001591	-	1439	-	ENSRNOP00000001591	169 (aa)	XP_017453738	D3ZY31

Gene Model

Click here to download ENSRNOG00000001199's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03008	Ribosome biogenesis in eukaryotes	KEGG
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000001199's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000001199	Pop5	88	91.216	ENSG00000167272	POP5	99	86.335	Homo_sapiens
ENSRNOG00000001199	Pop5	84	52.817	ENSAPOG00000023686	POP5	96	50.000	Acanthochromis_polyacanthus
ENSRNOG00000001199	Pop5	100	83.140	ENSAMEG00000008503	POP5	94	83.333	Ailuropoda_melanoleuca
ENSRNOG00000001199	Pop5	84	53.521	ENSACIG00000018362	pop5	97	50.932	Amphilophus_citrinellus
ENSRNOG00000001199	Pop5	84	52.817	ENSAOCG00000001930	pop5	96	50.932	Amphiprion_ocellaris
ENSRNOG00000001199	Pop5	84	52.113	ENSAPEG00000006795	pop5	96	50.311	Amphiprion_percula
ENSRNOG00000001199	Pop5	91	51.948	ENSATEG00000016792	pop5	94	51.266	Anabas_testudineus
ENSRNOG00000001199	Pop5	53	71.910	ENSAPLG00000015761	POP5	92	66.667	Anas_platyrhynchos
ENSRNOG00000001199	Pop5	97	56.098	ENSACAG00000003091	POP5	95	57.595	Anolis_carolinensis
ENSRNOG00000001199	Pop5	88	89.865	ENSANAG00000023744	POP5	99	85.093	Aotus_nancymaae
ENSRNOG00000001199	Pop5	90	51.974	ENSACLG00000021131	-	95	52.201	Astatotilapia_calliptera
ENSRNOG00000001199	Pop5	89	52.318	ENSAMXG00000038175	pop5	92	50.000	Astyanax_mexicanus
ENSRNOG00000001199	Pop5	100	84.706	ENSBTAG00000005385	POP5	94	85.625	Bos_taurus
ENSRNOG00000001199	Pop5	88	90.541	ENSCJAG00000001309	POP5	99	85.714	Callithrix_jacchus
ENSRNOG00000001199	Pop5	100	84.706	ENSCAFG00000010389	POP5	94	84.375	Canis_familiaris
ENSRNOG00000001199	Pop5	100	84.706	ENSCAFG00020020663	POP5	94	84.375	Canis_lupus_dingo
ENSRNOG00000001199	Pop5	100	85.294	ENSCHIG00000016402	POP5	94	86.250	Capra_hircus
ENSRNOG00000001199	Pop5	100	87.574	ENSTSYG00000027616	POP5	95	88.750	Carlito_syrichta
ENSRNOG00000001199	Pop5	67	83.333	ENSCAPG00000016873	POP5	91	84.466	Cavia_aperea
ENSRNOG00000001199	Pop5	100	85.207	ENSCPOG00000012337	POP5	95	85.535	Cavia_porcellus
ENSRNOG00000001199	Pop5	88	89.865	ENSCCAG00000023154	POP5	99	85.093	Cebus_capucinus
ENSRNOG00000001199	Pop5	88	91.216	ENSCATG00000036825	POP5	99	86.957	Cercocebus_atys
ENSRNOG00000001199	Pop5	100	88.166	ENSCLAG00000007808	POP5	94	89.308	Chinchilla_lanigera
ENSRNOG00000001199	Pop5	88	91.216	ENSCSAG00000002246	POP5	99	86.335	Chlorocebus_sabaeus
ENSRNOG00000001199	Pop5	86	72.414	ENSCHOG00000013969	POP5	94	70.625	Choloepus_hoffmanni
ENSRNOG00000001199	Pop5	96	67.485	ENSCPBG00000011331	POP5	93	67.925	Chrysemys_picta_bellii
ENSRNOG00000001199	Pop5	88	90.541	ENSCANG00000028001	POP5	99	85.714	Colobus_angolensis_palliatus
ENSRNOG00000001199	Pop5	100	92.308	ENSCGRG00001017974	Pop5	94	93.711	Cricetulus_griseus_chok1gshd
ENSRNOG00000001199	Pop5	100	92.308	ENSCGRG00000010102	Pop5	94	93.711	Cricetulus_griseus_crigri
ENSRNOG00000001199	Pop5	81	56.204	ENSCSEG00000011103	pop5	91	56.204	Cynoglossus_semilaevis
ENSRNOG00000001199	Pop5	91	52.597	ENSCSEG00000008332	-	96	51.852	Cynoglossus_semilaevis
ENSRNOG00000001199	Pop5	89	40.789	ENSCVAG00000009152	-	90	40.789	Cyprinodon_variegatus
ENSRNOG00000001199	Pop5	88	52.318	ENSDARG00000053452	pop5	95	50.932	Danio_rerio
ENSRNOG00000001199	Pop5	100	82.558	ENSDNOG00000012668	-	85	84.568	Dasypus_novemcinctus
ENSRNOG00000001199	Pop5	100	84.118	ENSDNOG00000045952	-	94	86.250	Dasypus_novemcinctus
ENSRNOG00000001199	Pop5	100	86.982	ENSDORG00000029401	Pop5	95	87.421	Dipodomys_ordii
ENSRNOG00000001199	Pop5	84	30.986	FBgn0036696	CG14057	95	30.986	Drosophila_melanogaster
ENSRNOG00000001199	Pop5	99	83.234	ENSETEG00000009283	POP5	94	84.906	Echinops_telfairi
ENSRNOG00000001199	Pop5	87	39.456	ENSEBUG00000016369	pop5	89	39.726	Eptatretus_burgeri
ENSRNOG00000001199	Pop5	100	83.529	ENSEASG00005004714	POP5	94	85.625	Equus_asinus_asinus
ENSRNOG00000001199	Pop5	100	83.529	ENSECAG00000010012	POP5	94	86.250	Equus_caballus
ENSRNOG00000001199	Pop5	96	52.147	ENSELUG00000023394	pop5	95	53.247	Esox_lucius
ENSRNOG00000001199	Pop5	100	84.706	ENSFCAG00000042614	POP5	94	86.250	Felis_catus
ENSRNOG00000001199	Pop5	90	66.447	ENSFALG00000007537	POP5	91	66.447	Ficedula_albicollis
ENSRNOG00000001199	Pop5	99	84.524	ENSFDAG00000009972	POP5	95	87.421	Fukomys_damarensis
ENSRNOG00000001199	Pop5	98	52.695	ENSFHEG00000022341	pop5	95	53.797	Fundulus_heteroclitus
ENSRNOG00000001199	Pop5	72	57.377	ENSGMOG00000001073	pop5	92	57.377	Gadus_morhua
ENSRNOG00000001199	Pop5	88	60.135	ENSGALG00000007124	POP5	52	60.135	Gallus_gallus
ENSRNOG00000001199	Pop5	84	57.042	ENSGAFG00000005937	-	94	55.063	Gambusia_affinis
ENSRNOG00000001199	Pop5	93	53.125	ENSGACG00000012710	-	98	53.125	Gasterosteus_aculeatus
ENSRNOG00000001199	Pop5	99	66.467	ENSGAGG00000016005	POP5	93	67.925	Gopherus_agassizii
ENSRNOG00000001199	Pop5	88	91.216	ENSGGOG00000013505	POP5	99	86.335	Gorilla_gorilla
ENSRNOG00000001199	Pop5	84	53.521	ENSHBUG00000011718	-	95	51.250	Haplochromis_burtoni
ENSRNOG00000001199	Pop5	100	84.615	ENSHGLG00000011786	POP5	95	85.535	Heterocephalus_glaber_female
ENSRNOG00000001199	Pop5	100	84.615	ENSHGLG00100014284	POP5	95	85.535	Heterocephalus_glaber_male
ENSRNOG00000001199	Pop5	84	52.113	ENSHCOG00000011809	pop5	96	49.367	Hippocampus_comes
ENSRNOG00000001199	Pop5	91	49.673	ENSIPUG00000003437	pop5	94	48.734	Ictalurus_punctatus
ENSRNOG00000001199	Pop5	100	88.166	ENSSTOG00000012577	POP5	94	88.050	Ictidomys_tridecemlineatus
ENSRNOG00000001199	Pop5	100	82.456	ENSJJAG00000001080	Pop5	95	85.714	Jaculus_jaculus
ENSRNOG00000001199	Pop5	87	50.340	ENSKMAG00000011158	-	92	50.000	Kryptolebias_marmoratus
ENSRNOG00000001199	Pop5	91	50.649	ENSLBEG00000008652	pop5	84	50.649	Labrus_bergylta
ENSRNOG00000001199	Pop5	100	56.805	ENSLACG00000018188	POP5	98	60.127	Latimeria_chalumnae
ENSRNOG00000001199	Pop5	84	53.521	ENSLOCG00000002924	pop5	94	51.266	Lepisosteus_oculatus
ENSRNOG00000001199	Pop5	100	85.965	ENSLAFG00000014545	POP5	94	86.957	Loxodonta_africana
ENSRNOG00000001199	Pop5	88	91.216	ENSMFAG00000045933	POP5	100	87.261	Macaca_fascicularis
ENSRNOG00000001199	Pop5	88	91.216	ENSMMUG00000040120	POP5	99	86.335	Macaca_mulatta
ENSRNOG00000001199	Pop5	88	91.216	ENSMNEG00000041716	POP5	99	86.335	Macaca_nemestrina
ENSRNOG00000001199	Pop5	88	90.541	ENSMLEG00000029377	POP5	99	85.714	Mandrillus_leucophaeus
ENSRNOG00000001199	Pop5	89	53.333	ENSMAMG00000002108	pop5	94	51.266	Mastacembelus_armatus
ENSRNOG00000001199	Pop5	84	53.521	ENSMZEG00005000069	-	95	51.250	Maylandia_zebra
ENSRNOG00000001199	Pop5	100	92.899	ENSMAUG00000019670	Pop5	94	93.082	Mesocricetus_auratus
ENSRNOG00000001199	Pop5	100	88.235	ENSMICG00000008692	POP5	94	89.375	Microcebus_murinus
ENSRNOG00000001199	Pop5	100	84.024	ENSMOCG00000013322	Pop5	93	85.443	Microtus_ochrogaster
ENSRNOG00000001199	Pop5	80	54.074	ENSMMOG00000010471	pop5	89	53.061	Mola_mola
ENSRNOG00000001199	Pop5	100	75.740	ENSMODG00000003066	POP5	64	77.358	Monodelphis_domestica
ENSRNOG00000001199	Pop5	84	54.225	ENSMALG00000017797	-	96	50.932	Monopterus_albus
ENSRNOG00000001199	Pop5	100	95.858	MGP_CAROLIEiJ_G0027618	Pop5	94	96.226	Mus_caroli
ENSRNOG00000001199	Pop5	100	95.858	ENSMUSG00000060152	Pop5	94	96.226	Mus_musculus
ENSRNOG00000001199	Pop5	100	93.491	MGP_PahariEiJ_G0024198	Pop5	94	93.711	Mus_pahari
ENSRNOG00000001199	Pop5	100	94.675	MGP_SPRETEiJ_G0028616	Pop5	94	94.969	Mus_spretus
ENSRNOG00000001199	Pop5	88	86.577	ENSMPUG00000003221	POP5	94	84.277	Mustela_putorius_furo
ENSRNOG00000001199	Pop5	98	84.431	ENSMLUG00000014657	POP5	97	85.802	Myotis_lucifugus
ENSRNOG00000001199	Pop5	100	88.235	ENSNGAG00000002594	Pop5	94	91.250	Nannospalax_galili
ENSRNOG00000001199	Pop5	83	46.429	ENSNBRG00000001020	-	98	46.429	Neolamprologus_brichardi
ENSRNOG00000001199	Pop5	88	90.541	ENSNLEG00000015839	POP5	94	88.312	Nomascus_leucogenys
ENSRNOG00000001199	Pop5	100	76.331	ENSMEUG00000015288	POP5	96	78.981	Notamacropus_eugenii
ENSRNOG00000001199	Pop5	86	91.096	ENSOPRG00000004327	POP5	94	88.199	Ochotona_princeps
ENSRNOG00000001199	Pop5	100	85.799	ENSODEG00000006549	-	94	86.792	Octodon_degus
ENSRNOG00000001199	Pop5	99	74.405	ENSODEG00000010351	-	93	74.684	Octodon_degus
ENSRNOG00000001199	Pop5	84	53.521	ENSONIG00000011172	pop5	95	51.250	Oreochromis_niloticus
ENSRNOG00000001199	Pop5	68	70.435	ENSOANG00000001792	-	96	72.477	Ornithorhynchus_anatinus
ENSRNOG00000001199	Pop5	99	85.207	ENSOCUG00000006537	POP5	94	85.000	Oryctolagus_cuniculus
ENSRNOG00000001199	Pop5	90	51.316	ENSORLG00000014745	pop5	91	51.316	Oryzias_latipes
ENSRNOG00000001199	Pop5	84	52.113	ENSORLG00020001168	pop5	85	52.113	Oryzias_latipes_hni
ENSRNOG00000001199	Pop5	80	54.412	ENSORLG00015013535	pop5	80	54.412	Oryzias_latipes_hsok
ENSRNOG00000001199	Pop5	96	49.398	ENSOMEG00000017643	pop5	96	50.311	Oryzias_melastigma
ENSRNOG00000001199	Pop5	95	85.625	ENSOGAG00000008528	POP5	97	86.164	Otolemur_garnettii
ENSRNOG00000001199	Pop5	100	84.302	ENSOARG00000012764	POP5	94	85.185	Ovis_aries
ENSRNOG00000001199	Pop5	88	91.216	ENSPPAG00000043719	POP5	99	86.335	Pan_paniscus
ENSRNOG00000001199	Pop5	100	84.706	ENSPPRG00000006474	POP5	94	86.250	Panthera_pardus
ENSRNOG00000001199	Pop5	100	84.706	ENSPTIG00000012194	POP5	94	86.250	Panthera_tigris_altaica
ENSRNOG00000001199	Pop5	88	91.216	ENSPTRG00000005543	POP5	99	86.335	Pan_troglodytes
ENSRNOG00000001199	Pop5	88	91.216	ENSPANG00000014166	POP5	99	86.335	Papio_anubis
ENSRNOG00000001199	Pop5	88	54.362	ENSPKIG00000025154	pop5	95	53.797	Paramormyrops_kingsleyae
ENSRNOG00000001199	Pop5	65	70.000	ENSPSIG00000013154	POP5	79	71.429	Pelodiscus_sinensis
ENSRNOG00000001199	Pop5	98	50.000	ENSPMGG00000000812	-	96	50.943	Periophthalmus_magnuspinnatus
ENSRNOG00000001199	Pop5	100	91.716	ENSPEMG00000017493	Pop5	94	93.082	Peromyscus_maniculatus_bairdii
ENSRNOG00000001199	Pop5	88	55.405	ENSPFOG00000013000	pop5	94	56.436	Poecilia_formosa
ENSRNOG00000001199	Pop5	84	55.634	ENSPLAG00000014070	pop5	94	53.165	Poecilia_latipinna
ENSRNOG00000001199	Pop5	87	54.422	ENSPMEG00000024039	pop5	95	52.830	Poecilia_mexicana
ENSRNOG00000001199	Pop5	87	54.422	ENSPMEG00000012863	POP5	95	52.830	Poecilia_mexicana
ENSRNOG00000001199	Pop5	84	55.634	ENSPREG00000020151	pop5	85	55.634	Poecilia_reticulata
ENSRNOG00000001199	Pop5	88	90.541	ENSPPYG00000005036	POP5	83	86.250	Pongo_abelii
ENSRNOG00000001199	Pop5	62	90.385	ENSPCAG00000004788	POP5	100	90.385	Procavia_capensis
ENSRNOG00000001199	Pop5	100	87.059	ENSPCOG00000017618	POP5	94	89.375	Propithecus_coquereli
ENSRNOG00000001199	Pop5	100	85.882	ENSPVAG00000002233	POP5	94	87.500	Pteropus_vampyrus
ENSRNOG00000001199	Pop5	84	53.521	ENSPNYG00000002679	pop5	95	51.250	Pundamilia_nyererei
ENSRNOG00000001199	Pop5	84	49.650	ENSPNAG00000012662	pop5	81	49.306	Pygocentrus_nattereri
ENSRNOG00000001199	Pop5	86	91.096	ENSRBIG00000043505	POP5	96	90.066	Rhinopithecus_bieti
ENSRNOG00000001199	Pop5	88	91.216	ENSRROG00000045063	POP5	96	90.066	Rhinopithecus_roxellana
ENSRNOG00000001199	Pop5	88	90.541	ENSSBOG00000032691	POP5	100	88.971	Saimiri_boliviensis_boliviensis
ENSRNOG00000001199	Pop5	84	54.225	ENSSFOG00015005630	pop5	87	55.224	Scleropages_formosus
ENSRNOG00000001199	Pop5	84	52.083	ENSSMAG00000018868	pop5	85	52.083	Scophthalmus_maximus
ENSRNOG00000001199	Pop5	99	51.497	ENSSDUG00000001282	-	94	52.532	Seriola_dumerili
ENSRNOG00000001199	Pop5	99	50.898	ENSSLDG00000017031	pop5	94	51.899	Seriola_lalandi_dorsalis
ENSRNOG00000001199	Pop5	99	50.898	ENSSLDG00000003801	-	94	51.899	Seriola_lalandi_dorsalis
ENSRNOG00000001199	Pop5	62	89.423	ENSSARG00000005564	POP5	64	89.423	Sorex_araneus
ENSRNOG00000001199	Pop5	84	72.535	ENSSPUG00000015531	POP5	93	68.387	Sphenodon_punctatus
ENSRNOG00000001199	Pop5	84	56.338	ENSSPAG00000015306	pop5	96	53.416	Stegastes_partitus
ENSRNOG00000001199	Pop5	100	87.647	ENSSSCG00000009912	POP5	94	88.125	Sus_scrofa
ENSRNOG00000001199	Pop5	100	63.905	ENSTGUG00000009602	POP5	93	66.447	Taeniopygia_guttata
ENSRNOG00000001199	Pop5	99	49.701	ENSTRUG00000016214	pop5	92	52.288	Takifugu_rubripes
ENSRNOG00000001199	Pop5	99	52.976	ENSTNIG00000011465	pop5	86	57.639	Tetraodon_nigroviridis
ENSRNOG00000001199	Pop5	100	85.207	ENSTBEG00000010131	POP5	94	87.421	Tupaia_belangeri
ENSRNOG00000001199	Pop5	100	87.059	ENSTTRG00000000153	POP5	94	86.875	Tursiops_truncatus
ENSRNOG00000001199	Pop5	96	82.927	ENSUAMG00000015541	POP5	71	83.117	Ursus_americanus
ENSRNOG00000001199	Pop5	100	83.529	ENSUMAG00000006137	POP5	94	83.750	Ursus_maritimus
ENSRNOG00000001199	Pop5	100	87.059	ENSVPAG00000010365	POP5	94	87.500	Vicugna_pacos
ENSRNOG00000001199	Pop5	100	84.706	ENSVVUG00000021154	POP5	94	84.375	Vulpes_vulpes
ENSRNOG00000001199	Pop5	67	62.832	ENSXETG00000031793	POP5	89	66.667	Xenopus_tropicalis
ENSRNOG00000001199	Pop5	84	57.042	ENSXMAG00000003508	-	82	54.717	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000172	ribonuclease MRP complex	21873635.	IBA	Component
GO:0000172	ribonuclease MRP complex	-	ISO	Component
GO:0001682	tRNA 5'-leader removal	-	IEA	Process
GO:0001682	tRNA 5'-leader removal	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0004526	ribonuclease P activity	21873635.	IBA	Function
GO:0004526	ribonuclease P activity	-	ISO	Function
GO:0004526	ribonuclease P activity	-	ISO	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005655	nucleolar ribonuclease P complex	21873635.	IBA	Component
GO:0005655	nucleolar ribonuclease P complex	-	ISO	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0008033	tRNA processing	21873635.	IBA	Process
GO:0008033	tRNA processing	-	ISO	Process
GO:0008150	biological_process	-	ND	Process
GO:0030681	multimeric ribonuclease P complex	-	ISO	Component
GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	-	IEA	Process