EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000001203 (Gene tree)
Gene ID: 309674
Gene Symbol: Rrp1
Alias: LOC309674|Nnp1
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 11283 bases
Position: chr20:10981998-10993280
Accession: 1307286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001597	Nop52	PF05997.12	1.6e-68	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000001597	-	1829	-	ENSRNOP00000001597	443 (aa)	-	Q5M9F3

Gene Model

Click here to download ENSRNOG00000001203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000001203's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000001203	Rrp1	98	65.812	ENSG00000160214	RRP1	96	86.047	Homo_sapiens
ENSRNOG00000001203	Rrp1	98	64.602	ENSAMEG00000011448	RRP1	98	63.696	Ailuropoda_melanoleuca
ENSRNOG00000001203	Rrp1	65	50.173	ENSACIG00000019121	rrp1	57	48.780	Amphilophus_citrinellus
ENSRNOG00000001203	Rrp1	93	46.265	ENSAOCG00000017894	-	75	50.000	Amphiprion_ocellaris
ENSRNOG00000001203	Rrp1	80	71.229	ENSANAG00000037815	RRP1	99	62.168	Aotus_nancymaae
ENSRNOG00000001203	Rrp1	100	62.144	ENSBTAG00000003981	RRP1	100	59.780	Bos_taurus
ENSRNOG00000001203	Rrp1	88	70.992	ENSCJAG00000043205	RRP1	89	64.334	Callithrix_jacchus
ENSRNOG00000001203	Rrp1	100	66.517	ENSCAFG00000010646	RRP1	80	84.519	Canis_familiaris
ENSRNOG00000001203	Rrp1	100	66.517	ENSCAFG00020018979	RRP1	96	64.000	Canis_lupus_dingo
ENSRNOG00000001203	Rrp1	100	61.926	ENSCHIG00000020948	RRP1	100	61.538	Capra_hircus
ENSRNOG00000001203	Rrp1	100	62.554	ENSTSYG00000012831	RRP1	100	62.661	Carlito_syrichta
ENSRNOG00000001203	Rrp1	99	65.208	ENSCPOG00000038986	RRP1	100	63.974	Cavia_porcellus
ENSRNOG00000001203	Rrp1	98	66.595	ENSCCAG00000029828	RRP1	99	65.227	Cebus_capucinus
ENSRNOG00000001203	Rrp1	83	48.677	ENSCCAG00000029384	RRP1B	51	49.709	Cebus_capucinus
ENSRNOG00000001203	Rrp1	98	64.693	ENSCATG00000015632	RRP1	99	65.227	Cercocebus_atys
ENSRNOG00000001203	Rrp1	98	69.794	ENSCLAG00000011639	RRP1	99	66.592	Chinchilla_lanigera
ENSRNOG00000001203	Rrp1	75	74.551	ENSCSAG00000007936	RRP1	100	73.653	Chlorocebus_sabaeus
ENSRNOG00000001203	Rrp1	77	34.294	ENSCING00000003304	-	73	33.429	Ciona_intestinalis
ENSRNOG00000001203	Rrp1	89	64.213	ENSCANG00000042611	RRP1	84	62.690	Colobus_angolensis_palliatus
ENSRNOG00000001203	Rrp1	98	84.247	ENSCGRG00001011920	Rrp1	98	82.648	Cricetulus_griseus_chok1gshd
ENSRNOG00000001203	Rrp1	75	47.164	ENSCGRG00001023882	-	55	66.667	Cricetulus_griseus_chok1gshd
ENSRNOG00000001203	Rrp1	98	84.247	ENSCGRG00000008915	Rrp1	98	82.648	Cricetulus_griseus_crigri
ENSRNOG00000001203	Rrp1	82	49.062	ENSCSEG00000020711	-	64	50.000	Cynoglossus_semilaevis
ENSRNOG00000001203	Rrp1	79	46.023	ENSCVAG00000017568	-	88	45.455	Cyprinodon_variegatus
ENSRNOG00000001203	Rrp1	98	65.158	ENSDNOG00000019880	RRP1	99	61.803	Dasypus_novemcinctus
ENSRNOG00000001203	Rrp1	88	67.901	ENSDORG00000002104	Rrp1	98	69.307	Dipodomys_ordii
ENSRNOG00000001203	Rrp1	75	58.982	ENSETEG00000002963	-	73	58.383	Echinops_telfairi
ENSRNOG00000001203	Rrp1	98	64.126	ENSEASG00005001673	RRP1	99	63.901	Equus_asinus_asinus
ENSRNOG00000001203	Rrp1	98	63.901	ENSECAG00000015703	RRP1	99	63.453	Equus_caballus
ENSRNOG00000001203	Rrp1	89	44.844	ENSELUG00000015885	-	92	46.939	Esox_lucius
ENSRNOG00000001203	Rrp1	93	67.146	ENSFCAG00000008434	RRP1	85	69.133	Felis_catus
ENSRNOG00000001203	Rrp1	99	63.297	ENSFDAG00000013728	RRP1	100	63.216	Fukomys_damarensis
ENSRNOG00000001203	Rrp1	78	48.547	ENSGACG00000001438	rrp1	52	46.647	Gasterosteus_aculeatus
ENSRNOG00000001203	Rrp1	98	66.239	ENSGGOG00000000173	RRP1	99	65.302	Gorilla_gorilla
ENSRNOG00000001203	Rrp1	86	45.153	ENSHGLG00000004968	RRP1B	61	42.857	Heterocephalus_glaber_female
ENSRNOG00000001203	Rrp1	95	67.053	ENSHGLG00000017085	RRP1	94	64.680	Heterocephalus_glaber_female
ENSRNOG00000001203	Rrp1	76	40.173	ENSHGLG00100002232	RRP1B	54	38.043	Heterocephalus_glaber_male
ENSRNOG00000001203	Rrp1	78	45.983	ENSIPUG00000000673	-	69	45.983	Ictalurus_punctatus
ENSRNOG00000001203	Rrp1	97	67.955	ENSSTOG00000011116	RRP1	99	64.091	Ictidomys_tridecemlineatus
ENSRNOG00000001203	Rrp1	100	74.720	ENSJJAG00000018886	Rrp1	100	73.602	Jaculus_jaculus
ENSRNOG00000001203	Rrp1	78	46.537	ENSLBEG00000021417	RRP1	89	46.240	Labrus_bergylta
ENSRNOG00000001203	Rrp1	98	62.302	ENSLAFG00000022901	RRP1	98	61.915	Loxodonta_africana
ENSRNOG00000001203	Rrp1	93	49.048	ENSLAFG00000000766	RRP1B	89	50.132	Loxodonta_africana
ENSRNOG00000001203	Rrp1	98	65.319	ENSMFAG00000003202	RRP1	99	65.152	Macaca_fascicularis
ENSRNOG00000001203	Rrp1	98	65.525	ENSMMUG00000012304	RRP1	99	64.935	Macaca_mulatta
ENSRNOG00000001203	Rrp1	98	65.310	ENSMNEG00000031210	RRP1	99	64.719	Macaca_nemestrina
ENSRNOG00000001203	Rrp1	88	66.837	ENSMLEG00000037797	RRP1	99	63.208	Mandrillus_leucophaeus
ENSRNOG00000001203	Rrp1	98	70.938	ENSMAUG00000017653	Rrp1	98	70.938	Mesocricetus_auratus
ENSRNOG00000001203	Rrp1	98	67.640	ENSMICG00000004700	RRP1	98	65.843	Microcebus_murinus
ENSRNOG00000001203	Rrp1	100	69.215	ENSMOCG00000015687	Rrp1	100	68.595	Microtus_ochrogaster
ENSRNOG00000001203	Rrp1	81	44.904	ENSMMOG00000019175	rrp1	86	45.058	Mola_mola
ENSRNOG00000001203	Rrp1	79	59.026	ENSMODG00000021036	-	52	56.630	Monodelphis_domestica
ENSRNOG00000001203	Rrp1	78	50.000	ENSMALG00000010310	rrp1	88	48.837	Monopterus_albus
ENSRNOG00000001203	Rrp1	75	45.181	MGP_CAROLIEiJ_G0021376	Rrp1b	53	63.492	Mus_caroli
ENSRNOG00000001203	Rrp1	100	76.566	MGP_CAROLIEiJ_G0015508	Rrp1	85	91.213	Mus_caroli
ENSRNOG00000001203	Rrp1	75	46.687	ENSMUSG00000058392	Rrp1b	53	65.079	Mus_musculus
ENSRNOG00000001203	Rrp1	100	76.162	ENSMUSG00000061032	Rrp1	55	95.556	Mus_musculus
ENSRNOG00000001203	Rrp1	100	73.843	MGP_PahariEiJ_G0030921	Rrp1	85	92.469	Mus_pahari
ENSRNOG00000001203	Rrp1	75	46.687	MGP_PahariEiJ_G0023695	Rrp1b	53	63.492	Mus_pahari
ENSRNOG00000001203	Rrp1	100	75.960	MGP_SPRETEiJ_G0016321	Rrp1	85	90.795	Mus_spretus
ENSRNOG00000001203	Rrp1	75	47.590	MGP_SPRETEiJ_G0022290	Rrp1b	53	65.079	Mus_spretus
ENSRNOG00000001203	Rrp1	89	64.045	ENSMPUG00000009826	RRP1	77	84.937	Mustela_putorius_furo
ENSRNOG00000001203	Rrp1	87	84.716	ENSMLUG00000017788	RRP1	79	83.682	Myotis_lucifugus
ENSRNOG00000001203	Rrp1	97	55.785	ENSNGAG00000022344	Rrp1	77	68.619	Nannospalax_galili
ENSRNOG00000001203	Rrp1	91	71.464	ENSNLEG00000034734	RRP1	99	63.793	Nomascus_leucogenys
ENSRNOG00000001203	Rrp1	83	62.398	ENSOPRG00000001319	RRP1	97	63.510	Ochotona_princeps
ENSRNOG00000001203	Rrp1	77	58.651	ENSOANG00000006472	-	85	57.185	Ornithorhynchus_anatinus
ENSRNOG00000001203	Rrp1	71	52.727	ENSOCUG00000022843	-	72	78.808	Oryctolagus_cuniculus
ENSRNOG00000001203	Rrp1	98	65.533	ENSOGAG00000006105	RRP1	98	65.227	Otolemur_garnettii
ENSRNOG00000001203	Rrp1	79	49.020	ENSOGAG00000009872	RRP1B	54	48.468	Otolemur_garnettii
ENSRNOG00000001203	Rrp1	100	58.515	ENSOARG00000011434	RRP1	74	71.343	Ovis_aries
ENSRNOG00000001203	Rrp1	98	65.812	ENSPPAG00000029050	RRP1	99	64.871	Pan_paniscus
ENSRNOG00000001203	Rrp1	95	65.877	ENSPPRG00000010656	RRP1	100	61.790	Panthera_pardus
ENSRNOG00000001203	Rrp1	87	54.408	ENSPTIG00000019473	RRP1	72	57.357	Panthera_tigris_altaica
ENSRNOG00000001203	Rrp1	98	65.598	ENSPTRG00000013962	RRP1	99	64.655	Pan_troglodytes
ENSRNOG00000001203	Rrp1	98	64.968	ENSPANG00000015097	RRP1	99	65.011	Papio_anubis
ENSRNOG00000001203	Rrp1	78	40.056	ENSPMGG00000007512	-	84	38.547	Periophthalmus_magnuspinnatus
ENSRNOG00000001203	Rrp1	100	80.717	ENSPEMG00000018421	Rrp1	100	81.166	Peromyscus_maniculatus_bairdii
ENSRNOG00000001203	Rrp1	91	54.197	ENSPCIG00000015523	-	76	57.865	Phascolarctos_cinereus
ENSRNOG00000001203	Rrp1	98	64.744	ENSPPYG00000011474	RRP1	99	63.578	Pongo_abelii
ENSRNOG00000001203	Rrp1	82	51.507	ENSPCAG00000008370	-	64	68.776	Procavia_capensis
ENSRNOG00000001203	Rrp1	98	65.479	ENSPCOG00000017706	RRP1	98	64.108	Propithecus_coquereli
ENSRNOG00000001203	Rrp1	83	56.429	ENSPVAG00000009925	-	82	56.429	Pteropus_vampyrus
ENSRNOG00000001203	Rrp1	98	64.482	ENSRBIG00000032082	RRP1	99	65.227	Rhinopithecus_bieti
ENSRNOG00000001203	Rrp1	98	64.606	ENSRROG00000039799	RRP1	99	65.227	Rhinopithecus_roxellana
ENSRNOG00000001203	Rrp1	91	69.877	ENSSBOG00000034689	RRP1	99	63.736	Saimiri_boliviensis_boliviensis
ENSRNOG00000001203	Rrp1	81	44.051	ENSSBOG00000034727	RRP1B	57	39.954	Saimiri_boliviensis_boliviensis
ENSRNOG00000001203	Rrp1	72	56.386	ENSSHAG00000010304	-	93	57.143	Sarcophilus_harrisii
ENSRNOG00000001203	Rrp1	71	44.578	ENSSFOG00015003932	-	51	41.692	Scleropages_formosus
ENSRNOG00000001203	Rrp1	78	48.876	ENSSMAG00000016847	-	80	48.328	Scophthalmus_maximus
ENSRNOG00000001203	Rrp1	82	49.731	ENSSSCG00000021698	RRP1B	52	49.570	Sus_scrofa
ENSRNOG00000001203	Rrp1	88	66.582	ENSSSCG00000037061	RRP1	99	61.454	Sus_scrofa
ENSRNOG00000001203	Rrp1	78	49.570	ENSTRUG00000017592	rrp1	97	48.256	Takifugu_rubripes
ENSRNOG00000001203	Rrp1	78	49.280	ENSTNIG00000005053	rrp1	54	49.133	Tetraodon_nigroviridis
ENSRNOG00000001203	Rrp1	61	69.799	ENSTBEG00000001260	-	53	69.799	Tupaia_belangeri
ENSRNOG00000001203	Rrp1	72	71.078	ENSTTRG00000011162	RRP1	79	71.078	Tursiops_truncatus
ENSRNOG00000001203	Rrp1	71	58.383	ENSUAMG00000014189	-	97	57.186	Ursus_americanus
ENSRNOG00000001203	Rrp1	89	63.196	ENSUMAG00000025507	RRP1	98	61.224	Ursus_maritimus
ENSRNOG00000001203	Rrp1	73	48.193	ENSUMAG00000025510	RRP1B	57	49.502	Ursus_maritimus
ENSRNOG00000001203	Rrp1	64	57.566	ENSVVUG00000024498	-	74	58.086	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0030687	preribosome, large subunit precursor	21873635.	IBA	Component
GO:0030688	preribosome, small subunit precursor	-	IEA	Component