EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000001210 (Gene tree)
Gene ID: 690297
Gene Symbol: Pwp2
Alias: LOC690297
Full Name: PWP2%2C small subunit processome component
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 14362 bases
Position: chr20:11228844-11243205
Accession: 1582817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001605	Utp12	PF04003.12	1.1e-22	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000001605	-	3904	XM_006256257	ENSRNOP00000001605	920 (aa)	XP_006256319	D3ZV54

Gene Model

Click here to download ENSRNOG00000001210's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000001210's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000001210	Pwp2	99	89.130	ENSG00000241945	PWP2	99	89.648	Homo_sapiens
ENSRNOG00000001210	Pwp2	96	71.396	ENSAPOG00000021522	pwp2h	99	70.419	Acanthochromis_polyacanthus
ENSRNOG00000001210	Pwp2	99	85.076	ENSAMEG00000010907	-	100	85.185	Ailuropoda_melanoleuca
ENSRNOG00000001210	Pwp2	96	72.148	ENSACIG00000024109	pwp2h	98	71.084	Amphilophus_citrinellus
ENSRNOG00000001210	Pwp2	96	71.396	ENSAOCG00000014853	pwp2h	99	70.939	Amphiprion_ocellaris
ENSRNOG00000001210	Pwp2	96	71.171	ENSAPEG00000008152	pwp2h	99	70.718	Amphiprion_percula
ENSRNOG00000001210	Pwp2	96	72.185	ENSATEG00000015493	pwp2h	100	72.338	Anabas_testudineus
ENSRNOG00000001210	Pwp2	96	75.986	ENSAPLG00000010371	-	98	74.862	Anas_platyrhynchos
ENSRNOG00000001210	Pwp2	98	74.229	ENSACAG00000017861	-	99	74.119	Anolis_carolinensis
ENSRNOG00000001210	Pwp2	99	88.248	ENSANAG00000034845	-	99	88.559	Aotus_nancymaae
ENSRNOG00000001210	Pwp2	96	71.700	ENSACLG00000011425	pwp2h	98	71.131	Astatotilapia_calliptera
ENSRNOG00000001210	Pwp2	97	68.777	ENSAMXG00000007988	pwp2h	97	68.352	Astyanax_mexicanus
ENSRNOG00000001210	Pwp2	99	88.255	ENSBTAG00000007105	-	99	88.364	Bos_taurus
ENSRNOG00000001210	Pwp2	96	38.598	WBGene00018891	F55F8.3	97	38.111	Caenorhabditis_elegans
ENSRNOG00000001210	Pwp2	99	87.514	ENSCJAG00000005570	-	99	88.009	Callithrix_jacchus
ENSRNOG00000001210	Pwp2	98	86.534	ENSCAFG00000010687	-	99	86.564	Canis_familiaris
ENSRNOG00000001210	Pwp2	82	85.505	ENSCAFG00020019199	-	89	85.544	Canis_lupus_dingo
ENSRNOG00000001210	Pwp2	97	84.916	ENSCHIG00000026362	-	99	84.153	Capra_hircus
ENSRNOG00000001210	Pwp2	100	88.395	ENSTSYG00000009022	-	98	89.097	Carlito_syrichta
ENSRNOG00000001210	Pwp2	99	89.606	ENSCAPG00000017934	-	99	89.648	Cavia_aperea
ENSRNOG00000001210	Pwp2	100	88.985	ENSCPOG00000023616	-	99	89.497	Cavia_porcellus
ENSRNOG00000001210	Pwp2	100	88.056	ENSCCAG00000034616	-	99	88.571	Cebus_capucinus
ENSRNOG00000001210	Pwp2	99	89.674	ENSCATG00000032550	-	99	90.088	Cercocebus_atys
ENSRNOG00000001210	Pwp2	99	89.923	ENSCLAG00000009503	-	99	89.978	Chinchilla_lanigera
ENSRNOG00000001210	Pwp2	99	89.457	ENSCSAG00000007903	-	99	89.868	Chlorocebus_sabaeus
ENSRNOG00000001210	Pwp2	96	77.540	ENSCPBG00000018335	-	99	76.354	Chrysemys_picta_bellii
ENSRNOG00000001210	Pwp2	98	56.396	ENSCSAVG00000004186	-	99	56.222	Ciona_savignyi
ENSRNOG00000001210	Pwp2	99	89.457	ENSCANG00000028013	-	99	89.868	Colobus_angolensis_palliatus
ENSRNOG00000001210	Pwp2	99	95.280	ENSCGRG00001020074	Pwp2	100	95.027	Cricetulus_griseus_chok1gshd
ENSRNOG00000001210	Pwp2	99	95.280	ENSCGRG00000003750	Pwp2	100	95.027	Cricetulus_griseus_crigri
ENSRNOG00000001210	Pwp2	96	71.896	ENSCSEG00000000861	pwp2h	98	71.381	Cynoglossus_semilaevis
ENSRNOG00000001210	Pwp2	96	71.268	ENSCVAG00000000996	pwp2h	99	70.843	Cyprinodon_variegatus
ENSRNOG00000001210	Pwp2	98	66.667	ENSDARG00000037109	pwp2h	97	66.081	Danio_rerio
ENSRNOG00000001210	Pwp2	86	86.439	ENSDNOG00000012128	-	99	86.439	Dasypus_novemcinctus
ENSRNOG00000001210	Pwp2	95	87.115	ENSDORG00000003015	Pwp2	94	87.514	Dipodomys_ordii
ENSRNOG00000001210	Pwp2	99	47.071	FBgn0033557	CG12325	97	47.454	Drosophila_melanogaster
ENSRNOG00000001210	Pwp2	85	62.660	ENSEBUG00000003140	pwp2h	96	61.809	Eptatretus_burgeri
ENSRNOG00000001210	Pwp2	98	89.333	ENSEASG00005001651	-	98	88.512	Equus_asinus_asinus
ENSRNOG00000001210	Pwp2	98	89.556	ENSECAG00000006090	-	98	88.731	Equus_caballus
ENSRNOG00000001210	Pwp2	100	69.740	ENSELUG00000001878	pwp2h	99	70.342	Esox_lucius
ENSRNOG00000001210	Pwp2	97	87.205	ENSFCAG00000004487	-	99	86.469	Felis_catus
ENSRNOG00000001210	Pwp2	99	74.289	ENSFALG00000012300	-	99	74.586	Ficedula_albicollis
ENSRNOG00000001210	Pwp2	98	90.022	ENSFDAG00000016140	-	99	89.800	Fukomys_damarensis
ENSRNOG00000001210	Pwp2	94	71.676	ENSFHEG00000009078	pwp2h	100	71.908	Fundulus_heteroclitus
ENSRNOG00000001210	Pwp2	96	70.148	ENSGMOG00000016522	pwp2h	98	69.290	Gadus_morhua
ENSRNOG00000001210	Pwp2	98	76.133	ENSGALG00000045726	-	99	76.022	Gallus_gallus
ENSRNOG00000001210	Pwp2	99	70.626	ENSGAFG00000011340	pwp2h	98	71.713	Gambusia_affinis
ENSRNOG00000001210	Pwp2	96	71.026	ENSGACG00000014928	pwp2h	98	70.407	Gasterosteus_aculeatus
ENSRNOG00000001210	Pwp2	98	77.017	ENSGAGG00000005377	-	99	76.796	Gopherus_agassizii
ENSRNOG00000001210	Pwp2	99	88.696	ENSGGOG00000041875	-	99	89.207	Gorilla_gorilla
ENSRNOG00000001210	Pwp2	96	71.924	ENSHBUG00000005530	pwp2h	98	71.350	Haplochromis_burtoni
ENSRNOG00000001210	Pwp2	99	88.043	ENSHGLG00000017401	-	99	88.449	Heterocephalus_glaber_female
ENSRNOG00000001210	Pwp2	99	87.364	ENSHGLG00100013888	-	98	87.762	Heterocephalus_glaber_male
ENSRNOG00000001210	Pwp2	97	68.989	ENSHCOG00000018121	pwp2h	97	67.912	Hippocampus_comes
ENSRNOG00000001210	Pwp2	100	67.452	ENSIPUG00000014074	pwp2h	98	68.415	Ictalurus_punctatus
ENSRNOG00000001210	Pwp2	99	90.044	ENSSTOG00000014194	-	98	90.198	Ictidomys_tridecemlineatus
ENSRNOG00000001210	Pwp2	100	93.043	ENSJJAG00000013039	Pwp2	99	93.612	Jaculus_jaculus
ENSRNOG00000001210	Pwp2	96	71.477	ENSKMAG00000003143	pwp2h	99	70.829	Kryptolebias_marmoratus
ENSRNOG00000001210	Pwp2	96	70.800	ENSLBEG00000006388	pwp2h	98	70.354	Labrus_bergylta
ENSRNOG00000001210	Pwp2	95	70.535	ENSLACG00000006084	pwp2h	98	71.098	Latimeria_chalumnae
ENSRNOG00000001210	Pwp2	97	71.205	ENSLOCG00000003663	pwp2h	97	70.634	Lepisosteus_oculatus
ENSRNOG00000001210	Pwp2	94	87.963	ENSLAFG00000003871	-	100	87.963	Loxodonta_africana
ENSRNOG00000001210	Pwp2	99	89.457	ENSMFAG00000044448	-	99	89.868	Macaca_fascicularis
ENSRNOG00000001210	Pwp2	99	89.457	ENSMMUG00000005271	PWP2	99	89.868	Macaca_mulatta
ENSRNOG00000001210	Pwp2	99	89.457	ENSMNEG00000030782	-	99	89.868	Macaca_nemestrina
ENSRNOG00000001210	Pwp2	99	89.457	ENSMLEG00000039860	-	99	89.868	Mandrillus_leucophaeus
ENSRNOG00000001210	Pwp2	96	72.235	ENSMAMG00000022327	pwp2h	98	71.492	Mastacembelus_armatus
ENSRNOG00000001210	Pwp2	96	71.588	ENSMZEG00005015448	pwp2h	98	71.021	Maylandia_zebra
ENSRNOG00000001210	Pwp2	99	68.231	ENSMGAG00000014596	-	99	68.197	Meleagris_gallopavo
ENSRNOG00000001210	Pwp2	92	64.953	ENSMAUG00000020265	Pwp2	94	66.355	Mesocricetus_auratus
ENSRNOG00000001210	Pwp2	99	88.491	ENSMICG00000001002	-	98	89.097	Microcebus_murinus
ENSRNOG00000001210	Pwp2	100	95.119	ENSMOCG00000003844	Pwp2	98	95.595	Microtus_ochrogaster
ENSRNOG00000001210	Pwp2	95	69.467	ENSMMOG00000000882	pwp2h	100	69.467	Mola_mola
ENSRNOG00000001210	Pwp2	99	81.628	ENSMODG00000021081	-	99	81.628	Monodelphis_domestica
ENSRNOG00000001210	Pwp2	99	71.055	ENSMALG00000000821	pwp2h	98	72.049	Monopterus_albus
ENSRNOG00000001210	Pwp2	100	96.308	MGP_CAROLIEiJ_G0015505	Pwp2	100	96.308	Mus_caroli
ENSRNOG00000001210	Pwp2	100	96.634	ENSMUSG00000032834	Pwp2	100	96.634	Mus_musculus
ENSRNOG00000001210	Pwp2	100	96.091	MGP_PahariEiJ_G0030918	Pwp2	100	96.091	Mus_pahari
ENSRNOG00000001210	Pwp2	100	96.308	MGP_SPRETEiJ_G0016318	Pwp2	100	96.308	Mus_spretus
ENSRNOG00000001210	Pwp2	87	84.065	ENSMPUG00000009936	-	98	84.898	Mustela_putorius_furo
ENSRNOG00000001210	Pwp2	98	83.867	ENSMLUG00000004823	-	98	83.828	Myotis_lucifugus
ENSRNOG00000001210	Pwp2	99	93.471	ENSNGAG00000021106	Pwp2	99	93.943	Nannospalax_galili
ENSRNOG00000001210	Pwp2	99	68.863	ENSNBRG00000016527	pwp2h	98	69.870	Neolamprologus_brichardi
ENSRNOG00000001210	Pwp2	97	89.888	ENSNLEG00000001928	-	100	89.663	Nomascus_leucogenys
ENSRNOG00000001210	Pwp2	99	89.727	ENSODEG00000013073	-	99	90.066	Octodon_degus
ENSRNOG00000001210	Pwp2	96	71.477	ENSONIG00000007136	pwp2h	98	71.334	Oreochromis_niloticus
ENSRNOG00000001210	Pwp2	98	77.864	ENSOANG00000006477	-	99	76.772	Ornithorhynchus_anatinus
ENSRNOG00000001210	Pwp2	98	70.829	ENSORLG00000000066	pwp2h	99	71.160	Oryzias_latipes
ENSRNOG00000001210	Pwp2	98	71.160	ENSORLG00020000321	pwp2h	99	71.492	Oryzias_latipes_hni
ENSRNOG00000001210	Pwp2	98	67.293	ENSORLG00015014731	pwp2h	99	67.072	Oryzias_latipes_hsok
ENSRNOG00000001210	Pwp2	89	76.768	ENSOMEG00000020671	pwp2h	99	76.768	Oryzias_melastigma
ENSRNOG00000001210	Pwp2	99	88.584	ENSOGAG00000012473	-	99	88.546	Otolemur_garnettii
ENSRNOG00000001210	Pwp2	99	84.957	ENSOARG00000011672	-	98	88.228	Ovis_aries
ENSRNOG00000001210	Pwp2	97	90.572	ENSPPAG00000037874	-	99	89.648	Pan_paniscus
ENSRNOG00000001210	Pwp2	100	85.451	ENSPPRG00000011088	-	99	86.689	Panthera_pardus
ENSRNOG00000001210	Pwp2	99	77.609	ENSPTIG00000020872	-	98	78.414	Panthera_tigris_altaica
ENSRNOG00000001210	Pwp2	99	89.239	ENSPTRG00000013969	-	99	89.758	Pan_troglodytes
ENSRNOG00000001210	Pwp2	99	89.457	ENSPANG00000006267	-	99	89.868	Papio_anubis
ENSRNOG00000001210	Pwp2	99	68.404	ENSPKIG00000002693	pwp2h	100	72.262	Paramormyrops_kingsleyae
ENSRNOG00000001210	Pwp2	96	76.637	ENSPSIG00000009783	-	99	75.414	Pelodiscus_sinensis
ENSRNOG00000001210	Pwp2	96	72.185	ENSPMGG00000022349	pwp2h	98	71.082	Periophthalmus_magnuspinnatus
ENSRNOG00000001210	Pwp2	99	95.499	ENSPEMG00000009968	Pwp2	99	95.600	Peromyscus_maniculatus_bairdii
ENSRNOG00000001210	Pwp2	99	80.501	ENSPCIG00000014548	-	99	80.748	Phascolarctos_cinereus
ENSRNOG00000001210	Pwp2	97	72.022	ENSPFOG00000014764	pwp2h	100	70.620	Poecilia_formosa
ENSRNOG00000001210	Pwp2	97	71.910	ENSPLAG00000011559	pwp2h	100	70.511	Poecilia_latipinna
ENSRNOG00000001210	Pwp2	97	71.700	ENSPMEG00000021347	pwp2h	100	70.838	Poecilia_mexicana
ENSRNOG00000001210	Pwp2	97	72.360	ENSPREG00000015887	pwp2h	100	71.366	Poecilia_reticulata
ENSRNOG00000001210	Pwp2	99	89.130	ENSPPYG00000011478	-	98	89.427	Pongo_abelii
ENSRNOG00000001210	Pwp2	99	82.116	ENSPCAG00000004676	-	99	81.758	Procavia_capensis
ENSRNOG00000001210	Pwp2	99	88.306	ENSPCOG00000012856	-	99	88.546	Propithecus_coquereli
ENSRNOG00000001210	Pwp2	99	79.912	ENSPVAG00000002312	-	99	80.066	Pteropus_vampyrus
ENSRNOG00000001210	Pwp2	74	69.364	ENSPNYG00000008379	pwp2h	97	68.688	Pundamilia_nyererei
ENSRNOG00000001210	Pwp2	97	68.882	ENSPNAG00000017876	pwp2h	98	68.415	Pygocentrus_nattereri
ENSRNOG00000001210	Pwp2	99	89.022	ENSRBIG00000034365	-	99	89.317	Rhinopithecus_bieti
ENSRNOG00000001210	Pwp2	99	89.130	ENSRROG00000031946	-	99	89.427	Rhinopithecus_roxellana
ENSRNOG00000001210	Pwp2	95	44.595	YCR057C	PWP2	96	43.723	Saccharomyces_cerevisiae
ENSRNOG00000001210	Pwp2	99	87.786	ENSSBOG00000034554	-	98	88.177	Saimiri_boliviensis_boliviensis
ENSRNOG00000001210	Pwp2	99	69.946	ENSSFOG00015003316	pwp2	99	70.338	Scleropages_formosus
ENSRNOG00000001210	Pwp2	96	72.573	ENSSMAG00000011839	pwp2h	98	70.957	Scophthalmus_maximus
ENSRNOG00000001210	Pwp2	96	72.573	ENSSDUG00000011462	pwp2h	98	71.761	Seriola_dumerili
ENSRNOG00000001210	Pwp2	96	72.912	ENSSLDG00000008651	pwp2h	97	71.872	Seriola_lalandi_dorsalis
ENSRNOG00000001210	Pwp2	98	76.582	ENSSPUG00000002980	-	100	76.693	Sphenodon_punctatus
ENSRNOG00000001210	Pwp2	96	71.221	ENSSPAG00000023368	pwp2h	99	71.177	Stegastes_partitus
ENSRNOG00000001210	Pwp2	99	84.891	ENSSSCG00000029627	-	99	85.824	Sus_scrofa
ENSRNOG00000001210	Pwp2	61	70.357	ENSTGUG00000018216	-	100	70.357	Taeniopygia_guttata
ENSRNOG00000001210	Pwp2	96	75.169	ENSTGUG00000005996	-	100	74.944	Taeniopygia_guttata
ENSRNOG00000001210	Pwp2	98	69.680	ENSTRUG00000013258	pwp2h	99	69.239	Takifugu_rubripes
ENSRNOG00000001210	Pwp2	97	69.438	ENSTNIG00000010613	pwp2h	98	69.101	Tetraodon_nigroviridis
ENSRNOG00000001210	Pwp2	82	91.902	ENSTBEG00000015597	-	88	91.902	Tupaia_belangeri
ENSRNOG00000001210	Pwp2	94	87.022	ENSTTRG00000006728	-	100	86.906	Tursiops_truncatus
ENSRNOG00000001210	Pwp2	100	85.699	ENSUAMG00000019031	-	100	85.807	Ursus_americanus
ENSRNOG00000001210	Pwp2	99	83.007	ENSUMAG00000025481	-	99	83.115	Ursus_maritimus
ENSRNOG00000001210	Pwp2	98	86.364	ENSVVUG00000024125	-	99	85.352	Vulpes_vulpes
ENSRNOG00000001210	Pwp2	80	43.630	ENSXETG00000018002	pwp2	98	51.131	Xenopus_tropicalis
ENSRNOG00000001210	Pwp2	96	68.243	ENSXCOG00000020474	pwp2h	100	66.703	Xiphophorus_couchianus
ENSRNOG00000001210	Pwp2	99	70.870	ENSXMAG00000008124	pwp2h	100	71.148	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000028	ribosomal small subunit assembly	21873635.	IBA	Process
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0034388	Pwp2p-containing subcomplex of 90S preribosome	21873635.	IBA	Component