EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000001243 (Gene tree)
Gene ID: 288661
Gene Symbol: Zcchc8
Alias: LOC288661
Full Name: zinc finger CCHC-type containing 8
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 22879 bases
Position: chr12:38303624-38326502
Accession: 1309774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001668	zf-CCHC	PF00098.23	0.00012	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000001668	-	3575	XM_006249333	ENSRNOP00000001668	695 (aa)	XP_006249395	D3ZUL8

Gene Model

Click here to download ENSRNOG00000001243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000001243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000001243	Zcchc8	100	80.141	ENSG00000033030	ZCCHC8	100	92.105	Homo_sapiens
ENSRNOG00000001243	Zcchc8	100	79.132	ENSAMEG00000014731	ZCCHC8	100	78.992	Ailuropoda_melanoleuca
ENSRNOG00000001243	Zcchc8	85	39.206	ENSACIG00000002185	zcchc8	82	55.602	Amphilophus_citrinellus
ENSRNOG00000001243	Zcchc8	57	72.772	ENSAPLG00000007582	ZCCHC8	99	59.615	Anas_platyrhynchos
ENSRNOG00000001243	Zcchc8	100	81.127	ENSANAG00000035627	ZCCHC8	100	80.986	Aotus_nancymaae
ENSRNOG00000001243	Zcchc8	100	81.716	ENSBTAG00000006114	ZCCHC8	100	81.575	Bos_taurus
ENSRNOG00000001243	Zcchc8	100	78.511	ENSCJAG00000020409	ZCCHC8	100	78.911	Callithrix_jacchus
ENSRNOG00000001243	Zcchc8	100	81.039	ENSCAFG00000007859	ZCCHC8	100	80.758	Canis_familiaris
ENSRNOG00000001243	Zcchc8	100	80.140	ENSCAFG00020016406	ZCCHC8	99	80.960	Canis_lupus_dingo
ENSRNOG00000001243	Zcchc8	100	81.653	ENSCHIG00000000649	ZCCHC8	100	81.513	Capra_hircus
ENSRNOG00000001243	Zcchc8	100	79.155	ENSTSYG00000011362	ZCCHC8	100	79.155	Carlito_syrichta
ENSRNOG00000001243	Zcchc8	90	80.377	ENSCAPG00000017455	ZCCHC8	99	81.162	Cavia_aperea
ENSRNOG00000001243	Zcchc8	99	80.000	ENSCPOG00000014385	ZCCHC8	99	80.563	Cavia_porcellus
ENSRNOG00000001243	Zcchc8	100	80.112	ENSCCAG00000028625	ZCCHC8	100	80.392	Cebus_capucinus
ENSRNOG00000001243	Zcchc8	100	79.296	ENSCATG00000041134	ZCCHC8	100	79.296	Cercocebus_atys
ENSRNOG00000001243	Zcchc8	100	74.334	ENSCSAG00000002121	ZCCHC8	100	74.334	Chlorocebus_sabaeus
ENSRNOG00000001243	Zcchc8	100	63.973	ENSCPBG00000002676	ZCCHC8	100	63.279	Chrysemys_picta_bellii
ENSRNOG00000001243	Zcchc8	100	90.254	ENSCGRG00001023706	Zcchc8	100	90.254	Cricetulus_griseus_chok1gshd
ENSRNOG00000001243	Zcchc8	100	90.254	ENSCGRG00000015199	Zcchc8	100	90.254	Cricetulus_griseus_crigri
ENSRNOG00000001243	Zcchc8	85	82.430	ENSDNOG00000046140	-	100	82.430	Dasypus_novemcinctus
ENSRNOG00000001243	Zcchc8	100	80.226	ENSDORG00000008756	Zcchc8	100	79.802	Dipodomys_ordii
ENSRNOG00000001243	Zcchc8	90	74.040	ENSETEG00000004735	ZCCHC8	89	73.675	Echinops_telfairi
ENSRNOG00000001243	Zcchc8	88	81.571	ENSEASG00005012441	ZCCHC8	97	81.280	Equus_asinus_asinus
ENSRNOG00000001243	Zcchc8	100	81.586	ENSECAG00000006984	ZCCHC8	100	81.188	Equus_caballus
ENSRNOG00000001243	Zcchc8	100	82.560	ENSFCAG00000027671	ZCCHC8	100	82.419	Felis_catus
ENSRNOG00000001243	Zcchc8	85	63.592	ENSFALG00000009102	ZCCHC8	99	62.300	Ficedula_albicollis
ENSRNOG00000001243	Zcchc8	87	81.818	ENSFDAG00000010964	ZCCHC8	94	88.496	Fukomys_damarensis
ENSRNOG00000001243	Zcchc8	99	61.878	ENSGALG00000004486	ZCCHC8	99	62.022	Gallus_gallus
ENSRNOG00000001243	Zcchc8	74	62.791	ENSGACG00000008163	zcchc8	82	60.417	Gasterosteus_aculeatus
ENSRNOG00000001243	Zcchc8	100	64.110	ENSGAGG00000007842	ZCCHC8	100	62.923	Gopherus_agassizii
ENSRNOG00000001243	Zcchc8	100	84.085	ENSSTOG00000001683	ZCCHC8	100	83.944	Ictidomys_tridecemlineatus
ENSRNOG00000001243	Zcchc8	65	82.262	ENSJJAG00000011650	Zcchc8	100	82.262	Jaculus_jaculus
ENSRNOG00000001243	Zcchc8	100	77.063	ENSLAFG00000016477	ZCCHC8	100	76.923	Loxodonta_africana
ENSRNOG00000001243	Zcchc8	100	79.155	ENSMFAG00000045203	ZCCHC8	100	79.155	Macaca_fascicularis
ENSRNOG00000001243	Zcchc8	100	79.296	ENSMMUG00000013643	ZCCHC8	100	79.296	Macaca_mulatta
ENSRNOG00000001243	Zcchc8	100	76.197	ENSMLEG00000031615	ZCCHC8	100	76.197	Mandrillus_leucophaeus
ENSRNOG00000001243	Zcchc8	90	63.303	ENSMGAG00000004799	ZCCHC8	99	63.142	Meleagris_gallopavo
ENSRNOG00000001243	Zcchc8	100	89.422	ENSMAUG00000018909	Zcchc8	100	89.563	Mesocricetus_auratus
ENSRNOG00000001243	Zcchc8	100	82.278	ENSMICG00000013486	ZCCHC8	100	81.997	Microcebus_murinus
ENSRNOG00000001243	Zcchc8	88	43.508	ENSMMOG00000017082	zcchc8	91	44.146	Mola_mola
ENSRNOG00000001243	Zcchc8	99	68.556	ENSMODG00000012264	ZCCHC8	100	69.453	Monodelphis_domestica
ENSRNOG00000001243	Zcchc8	100	90.254	MGP_CAROLIEiJ_G0027732	Zcchc8	100	90.395	Mus_caroli
ENSRNOG00000001243	Zcchc8	100	92.384	ENSMUSG00000029427	Zcchc8	100	92.525	Mus_musculus
ENSRNOG00000001243	Zcchc8	100	92.504	MGP_PahariEiJ_G0024312	Zcchc8	100	92.645	Mus_pahari
ENSRNOG00000001243	Zcchc8	100	92.243	MGP_SPRETEiJ_G0028730	Zcchc8	100	92.384	Mus_spretus
ENSRNOG00000001243	Zcchc8	100	83.099	ENSMPUG00000001986	ZCCHC8	100	82.958	Mustela_putorius_furo
ENSRNOG00000001243	Zcchc8	100	77.685	ENSMLUG00000005334	ZCCHC8	100	76.430	Myotis_lucifugus
ENSRNOG00000001243	Zcchc8	100	82.937	ENSNGAG00000015385	Zcchc8	100	82.517	Nannospalax_galili
ENSRNOG00000001243	Zcchc8	100	80.056	ENSNLEG00000001723	ZCCHC8	100	80.000	Nomascus_leucogenys
ENSRNOG00000001243	Zcchc8	90	71.053	ENSMEUG00000003497	ZCCHC8	100	71.517	Notamacropus_eugenii
ENSRNOG00000001243	Zcchc8	100	71.927	ENSOPRG00000013758	ZCCHC8	100	71.448	Ochotona_princeps
ENSRNOG00000001243	Zcchc8	85	66.720	ENSOANG00000006199	ZCCHC8	100	65.756	Ornithorhynchus_anatinus
ENSRNOG00000001243	Zcchc8	100	80.337	ENSOCUG00000013759	ZCCHC8	100	80.197	Oryctolagus_cuniculus
ENSRNOG00000001243	Zcchc8	85	81.758	ENSOGAG00000015900	ZCCHC8	100	81.758	Otolemur_garnettii
ENSRNOG00000001243	Zcchc8	100	80.501	ENSOARG00000010728	ZCCHC8	100	78.691	Ovis_aries
ENSRNOG00000001243	Zcchc8	100	80.000	ENSPPAG00000044102	ZCCHC8	100	80.000	Pan_paniscus
ENSRNOG00000001243	Zcchc8	100	81.997	ENSPPRG00000023848	ZCCHC8	100	81.857	Panthera_pardus
ENSRNOG00000001243	Zcchc8	100	82.419	ENSPTIG00000017015	ZCCHC8	100	82.278	Panthera_tigris_altaica
ENSRNOG00000001243	Zcchc8	100	80.000	ENSPTRG00000005579	ZCCHC8	100	80.000	Pan_troglodytes
ENSRNOG00000001243	Zcchc8	79	61.644	ENSPSIG00000011004	ZCCHC8	94	60.473	Pelodiscus_sinensis
ENSRNOG00000001243	Zcchc8	76	40.179	ENSPMGG00000000988	zcchc8	82	39.192	Periophthalmus_magnuspinnatus
ENSRNOG00000001243	Zcchc8	100	89.466	ENSPEMG00000007962	Zcchc8	100	89.185	Peromyscus_maniculatus_bairdii
ENSRNOG00000001243	Zcchc8	99	69.714	ENSPCIG00000028643	ZCCHC8	99	68.114	Phascolarctos_cinereus
ENSRNOG00000001243	Zcchc8	100	78.236	ENSPPYG00000005068	ZCCHC8	100	78.236	Pongo_abelii
ENSRNOG00000001243	Zcchc8	100	70.827	ENSPCAG00000016551	ZCCHC8	100	70.687	Procavia_capensis
ENSRNOG00000001243	Zcchc8	100	78.762	ENSPCOG00000014512	ZCCHC8	100	77.496	Propithecus_coquereli
ENSRNOG00000001243	Zcchc8	100	80.704	ENSPVAG00000001276	ZCCHC8	100	80.000	Pteropus_vampyrus
ENSRNOG00000001243	Zcchc8	100	62.185	ENSRBIG00000044855	ZCCHC8	100	62.291	Rhinopithecus_bieti
ENSRNOG00000001243	Zcchc8	100	78.873	ENSRROG00000030441	ZCCHC8	100	78.873	Rhinopithecus_roxellana
ENSRNOG00000001243	Zcchc8	100	80.000	ENSSBOG00000032964	ZCCHC8	100	80.460	Saimiri_boliviensis_boliviensis
ENSRNOG00000001243	Zcchc8	99	67.818	ENSSHAG00000010725	ZCCHC8	99	66.988	Sarcophilus_harrisii
ENSRNOG00000001243	Zcchc8	99	49.264	ENSSFOG00015018295	zcchc8	99	49.069	Scleropages_formosus
ENSRNOG00000001243	Zcchc8	88	68.480	ENSSARG00000003982	ZCCHC8	100	68.480	Sorex_araneus
ENSRNOG00000001243	Zcchc8	84	62.331	ENSSPUG00000011326	ZCCHC8	94	61.083	Sphenodon_punctatus
ENSRNOG00000001243	Zcchc8	100	81.716	ENSSSCG00000009792	ZCCHC8	89	81.575	Sus_scrofa
ENSRNOG00000001243	Zcchc8	89	63.665	ENSTGUG00000006286	ZCCHC8	100	61.598	Taeniopygia_guttata
ENSRNOG00000001243	Zcchc8	82	45.433	ENSTRUG00000008040	zcchc8	93	43.750	Takifugu_rubripes
ENSRNOG00000001243	Zcchc8	74	54.167	ENSTNIG00000015824	zcchc8	99	41.678	Tetraodon_nigroviridis
ENSRNOG00000001243	Zcchc8	100	78.903	ENSTTRG00000015809	ZCCHC8	100	78.762	Tursiops_truncatus
ENSRNOG00000001243	Zcchc8	88	83.758	ENSUAMG00000013723	ZCCHC8	97	83.758	Ursus_americanus
ENSRNOG00000001243	Zcchc8	100	82.889	ENSUMAG00000005282	ZCCHC8	100	83.580	Ursus_maritimus
ENSRNOG00000001243	Zcchc8	100	80.056	ENSVVUG00000017779	ZCCHC8	99	80.865	Vulpes_vulpes
ENSRNOG00000001243	Zcchc8	99	53.406	ENSXETG00000007797	zcchc8	99	53.973	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0008270	zinc ion binding	-	IEA	Function
GO:0016604	nuclear body	-	IEA	Component
GO:0016604	nuclear body	-	ISO	Component
GO:0031499	TRAMP complex	-	IEA	Component
GO:0031499	TRAMP complex	-	ISO	Component
GO:0071013	catalytic step 2 spliceosome	-	IEA	Component
GO:0071013	catalytic step 2 spliceosome	-	ISO	Component