EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000001253 (Gene tree)
Gene ID: 288516
Gene Symbol: Eif3b
Alias: Eif3s9|LOC288516|MGC112720
Full Name: eukaryotic translation initiation factor 3%2C subunit B
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 24458 bases
Position: chr12:16285733-16310190
Accession: 1309018
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000057188	RRM_1	PF00076.22	2.6e-07	1	1
ENSRNOP00000057188	eIF2A	PF08662.11	3.4e-72	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000060444	-	2919	-	ENSRNOP00000057188	797 (aa)	-	Q4G061

Gene Model

Click here to download ENSRNOG00000001253's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000001253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000001253	Eif3b	100	90.049	ENSG00000106263	EIF3B	100	99.346	Homo_sapiens
ENSRNOG00000001253	Eif3b	83	87.897	ENSAPOG00000002297	eif3bb	98	87.669	Acanthochromis_polyacanthus
ENSRNOG00000001253	Eif3b	83	88.048	ENSACIG00000015396	eif3bb	98	87.820	Amphilophus_citrinellus
ENSRNOG00000001253	Eif3b	83	87.746	ENSAOCG00000010921	eif3bb	98	87.519	Amphiprion_ocellaris
ENSRNOG00000001253	Eif3b	83	87.746	ENSAPEG00000000844	eif3bb	98	87.519	Amphiprion_percula
ENSRNOG00000001253	Eif3b	83	87.443	ENSATEG00000008626	eif3bb	98	87.218	Anabas_testudineus
ENSRNOG00000001253	Eif3b	81	93.519	ENSAPLG00000016062	EIF3B	100	93.519	Anas_platyrhynchos
ENSRNOG00000001253	Eif3b	82	92.237	ENSACAG00000008874	-	86	82.597	Anolis_carolinensis
ENSRNOG00000001253	Eif3b	100	90.012	ENSANAG00000020360	EIF3B	100	90.012	Aotus_nancymaae
ENSRNOG00000001253	Eif3b	83	86.989	ENSACLG00000000870	eif3bb	98	86.767	Astatotilapia_calliptera
ENSRNOG00000001253	Eif3b	84	86.547	ENSAMXG00000009773	eif3ba	98	86.547	Astyanax_mexicanus
ENSRNOG00000001253	Eif3b	100	88.582	ENSBTAG00000007474	EIF3B	100	89.335	Bos_taurus
ENSRNOG00000001253	Eif3b	84	34.222	WBGene00001225	eif-3.B	98	34.222	Caenorhabditis_elegans
ENSRNOG00000001253	Eif3b	100	89.583	ENSCJAG00000001442	EIF3B	100	89.583	Callithrix_jacchus
ENSRNOG00000001253	Eif3b	100	86.826	ENSCAFG00000016418	EIF3B	97	88.889	Canis_familiaris
ENSRNOG00000001253	Eif3b	100	84.191	ENSCAFG00020020771	EIF3B	100	86.267	Canis_lupus_dingo
ENSRNOG00000001253	Eif3b	100	89.460	ENSCHIG00000009941	EIF3B	100	90.213	Capra_hircus
ENSRNOG00000001253	Eif3b	88	91.013	ENSTSYG00000008256	EIF3B	99	93.908	Carlito_syrichta
ENSRNOG00000001253	Eif3b	81	91.049	ENSCAPG00000009347	-	98	91.049	Cavia_aperea
ENSRNOG00000001253	Eif3b	78	85.646	ENSCAPG00000006394	-	99	85.646	Cavia_aperea
ENSRNOG00000001253	Eif3b	100	90.966	ENSCPOG00000012541	-	100	90.966	Cavia_porcellus
ENSRNOG00000001253	Eif3b	100	89.223	ENSCPOG00000031410	-	100	89.850	Cavia_porcellus
ENSRNOG00000001253	Eif3b	100	90.123	ENSCCAG00000021556	EIF3B	96	98.799	Cebus_capucinus
ENSRNOG00000001253	Eif3b	100	90.418	ENSCATG00000040107	EIF3B	100	90.418	Cercocebus_atys
ENSRNOG00000001253	Eif3b	100	91.593	ENSCLAG00000006140	EIF3B	100	91.593	Chinchilla_lanigera
ENSRNOG00000001253	Eif3b	100	84.521	ENSCSAG00000017603	EIF3B	100	84.521	Chlorocebus_sabaeus
ENSRNOG00000001253	Eif3b	92	85.967	ENSCPBG00000020654	EIF3B	99	83.184	Chrysemys_picta_bellii
ENSRNOG00000001253	Eif3b	82	61.271	ENSCING00000003620	-	96	60.651	Ciona_intestinalis
ENSRNOG00000001253	Eif3b	87	97.688	ENSCANG00000042097	EIF3B	100	97.688	Colobus_angolensis_palliatus
ENSRNOG00000001253	Eif3b	100	96.617	ENSCGRG00001019278	Eif3b	100	96.617	Cricetulus_griseus_chok1gshd
ENSRNOG00000001253	Eif3b	100	96.255	ENSCGRG00000004618	Eif3b	100	96.255	Cricetulus_griseus_crigri
ENSRNOG00000001253	Eif3b	83	86.082	ENSCSEG00000020931	eif3bb	98	85.865	Cynoglossus_semilaevis
ENSRNOG00000001253	Eif3b	83	87.897	ENSCVAG00000015650	eif3bb	98	87.669	Cyprinodon_variegatus
ENSRNOG00000001253	Eif3b	84	85.629	ENSDARG00000074213	eif3bb	100	85.629	Danio_rerio
ENSRNOG00000001253	Eif3b	85	85.588	ENSDARG00000059654	eif3ba	99	85.588	Danio_rerio
ENSRNOG00000001253	Eif3b	89	94.832	ENSDNOG00000049572	EIF3B	100	87.621	Dasypus_novemcinctus
ENSRNOG00000001253	Eif3b	96	88.089	ENSDORG00000001401	Eif3b	100	87.469	Dipodomys_ordii
ENSRNOG00000001253	Eif3b	86	50.427	FBgn0034237	eIF3b	99	50.427	Drosophila_melanogaster
ENSRNOG00000001253	Eif3b	81	94.081	ENSETEG00000001719	EIF3B	99	94.081	Echinops_telfairi
ENSRNOG00000001253	Eif3b	85	73.460	ENSEBUG00000004379	eif3bb	99	73.538	Eptatretus_burgeri
ENSRNOG00000001253	Eif3b	100	88.792	ENSEASG00005021167	EIF3B	100	89.539	Equus_asinus_asinus
ENSRNOG00000001253	Eif3b	100	88.917	ENSECAG00000013671	EIF3B	100	89.539	Equus_caballus
ENSRNOG00000001253	Eif3b	72	95.531	ENSEEUG00000014359	EIF3B	88	95.531	Erinaceus_europaeus
ENSRNOG00000001253	Eif3b	83	87.106	ENSELUG00000021762	eif3bb	97	87.106	Esox_lucius
ENSRNOG00000001253	Eif3b	100	86.324	ENSFCAG00000005392	EIF3B	92	89.673	Felis_catus
ENSRNOG00000001253	Eif3b	89	88.997	ENSFALG00000013907	EIF3B	99	87.045	Ficedula_albicollis
ENSRNOG00000001253	Eif3b	92	93.724	ENSFDAG00000007558	EIF3B	96	92.867	Fukomys_damarensis
ENSRNOG00000001253	Eif3b	83	87.595	ENSFHEG00000002563	eif3bb	98	87.368	Fundulus_heteroclitus
ENSRNOG00000001253	Eif3b	83	82.485	ENSGMOG00000006100	eif3bb	98	82.485	Gadus_morhua
ENSRNOG00000001253	Eif3b	90	86.685	ENSGALG00000040999	EIF3B	96	83.673	Gallus_gallus
ENSRNOG00000001253	Eif3b	83	85.821	ENSGACG00000016738	eif3bb	98	85.821	Gasterosteus_aculeatus
ENSRNOG00000001253	Eif3b	99	82.152	ENSGAGG00000003659	EIF3B	95	83.808	Gopherus_agassizii
ENSRNOG00000001253	Eif3b	79	95.473	ENSGGOG00000016291	EIF3B	98	95.670	Gorilla_gorilla
ENSRNOG00000001253	Eif3b	83	86.989	ENSHBUG00000019329	eif3bb	98	86.767	Haplochromis_burtoni
ENSRNOG00000001253	Eif3b	100	90.966	ENSHGLG00000015253	EIF3B	100	90.966	Heterocephalus_glaber_female
ENSRNOG00000001253	Eif3b	100	86.449	ENSHGLG00100015005	EIF3B	91	93.872	Heterocephalus_glaber_male
ENSRNOG00000001253	Eif3b	81	87.597	ENSHCOG00000020583	eif3bb	98	86.957	Hippocampus_comes
ENSRNOG00000001253	Eif3b	84	87.444	ENSIPUG00000018347	eif3b	98	87.444	Ictalurus_punctatus
ENSRNOG00000001253	Eif3b	90	95.152	ENSSTOG00000021545	EIF3B	100	95.152	Ictidomys_tridecemlineatus
ENSRNOG00000001253	Eif3b	100	93.009	ENSJJAG00000014658	Eif3b	100	93.009	Jaculus_jaculus
ENSRNOG00000001253	Eif3b	83	86.838	ENSKMAG00000007432	eif3bb	98	86.617	Kryptolebias_marmoratus
ENSRNOG00000001253	Eif3b	83	88.200	ENSLBEG00000005233	eif3bb	98	87.970	Labrus_bergylta
ENSRNOG00000001253	Eif3b	84	90.269	ENSLACG00000010357	EIF3B	98	90.269	Latimeria_chalumnae
ENSRNOG00000001253	Eif3b	83	90.455	ENSLOCG00000004215	eif3bb	99	88.987	Lepisosteus_oculatus
ENSRNOG00000001253	Eif3b	100	87.732	ENSLAFG00000001540	EIF3B	100	88.525	Loxodonta_africana
ENSRNOG00000001253	Eif3b	100	89.664	ENSMFAG00000046100	EIF3B	100	89.664	Macaca_fascicularis
ENSRNOG00000001253	Eif3b	100	89.512	ENSMMUG00000015529	EIF3B	100	89.512	Macaca_mulatta
ENSRNOG00000001253	Eif3b	100	90.074	ENSMNEG00000042021	EIF3B	100	90.074	Macaca_nemestrina
ENSRNOG00000001253	Eif3b	84	98.512	ENSMLEG00000042295	EIF3B	100	98.512	Mandrillus_leucophaeus
ENSRNOG00000001253	Eif3b	83	87.897	ENSMAMG00000008654	eif3bb	98	87.669	Mastacembelus_armatus
ENSRNOG00000001253	Eif3b	83	86.989	ENSMZEG00005011827	eif3bb	98	86.767	Maylandia_zebra
ENSRNOG00000001253	Eif3b	81	93.519	ENSMGAG00000002719	EIF3B	100	93.519	Meleagris_gallopavo
ENSRNOG00000001253	Eif3b	100	96.361	ENSMAUG00000020259	Eif3b	100	96.361	Mesocricetus_auratus
ENSRNOG00000001253	Eif3b	100	89.877	ENSMICG00000010103	EIF3B	100	89.877	Microcebus_murinus
ENSRNOG00000001253	Eif3b	100	97.744	ENSMOCG00000000390	Eif3b	100	97.744	Microtus_ochrogaster
ENSRNOG00000001253	Eif3b	83	88.200	ENSMMOG00000003655	eif3bb	98	87.970	Mola_mola
ENSRNOG00000001253	Eif3b	85	96.324	ENSMODG00000009778	EIF3B	90	89.376	Monodelphis_domestica
ENSRNOG00000001253	Eif3b	83	80.060	ENSMALG00000002494	eif3bb	99	79.882	Monopterus_albus
ENSRNOG00000001253	Eif3b	100	98.257	MGP_CAROLIEiJ_G0027948	Eif3b	100	100.000	Mus_caroli
ENSRNOG00000001253	Eif3b	100	98.381	ENSMUSG00000056076	Eif3b	99	100.000	Mus_musculus
ENSRNOG00000001253	Eif3b	100	97.640	MGP_PahariEiJ_G0024520	Eif3b	100	100.000	Mus_pahari
ENSRNOG00000001253	Eif3b	100	98.132	MGP_SPRETEiJ_G0028952	Eif3b	100	100.000	Mus_spretus
ENSRNOG00000001253	Eif3b	82	96.799	ENSMPUG00000017919	EIF3B	99	96.799	Mustela_putorius_furo
ENSRNOG00000001253	Eif3b	84	97.329	ENSMLUG00000013740	EIF3B	99	97.329	Myotis_lucifugus
ENSRNOG00000001253	Eif3b	100	93.657	ENSNGAG00000016188	Eif3b	100	93.657	Nannospalax_galili
ENSRNOG00000001253	Eif3b	63	89.377	ENSNBRG00000008582	eif3bb	97	89.377	Neolamprologus_brichardi
ENSRNOG00000001253	Eif3b	99	80.702	ENSNLEG00000008647	EIF3B	99	81.980	Nomascus_leucogenys
ENSRNOG00000001253	Eif3b	64	97.458	ENSMEUG00000000880	EIF3B	70	97.458	Notamacropus_eugenii
ENSRNOG00000001253	Eif3b	81	93.458	ENSOPRG00000014504	EIF3B	99	93.458	Ochotona_princeps
ENSRNOG00000001253	Eif3b	100	81.932	ENSODEG00000012851	EIF3B	98	81.054	Octodon_degus
ENSRNOG00000001253	Eif3b	83	87.443	ENSONIG00000003283	eif3bb	98	87.218	Oreochromis_niloticus
ENSRNOG00000001253	Eif3b	75	97.171	ENSOANG00000004314	EIF3B	99	97.171	Ornithorhynchus_anatinus
ENSRNOG00000001253	Eif3b	85	97.496	ENSOCUG00000010289	EIF3B	100	97.496	Oryctolagus_cuniculus
ENSRNOG00000001253	Eif3b	83	87.273	ENSORLG00000008861	eif3bb	98	86.807	Oryzias_latipes
ENSRNOG00000001253	Eif3b	83	87.273	ENSORLG00020012732	eif3bb	98	86.807	Oryzias_latipes_hni
ENSRNOG00000001253	Eif3b	83	87.253	ENSORLG00015000357	eif3bb	98	86.807	Oryzias_latipes_hsok
ENSRNOG00000001253	Eif3b	83	86.364	ENSOMEG00000017895	eif3bb	98	86.145	Oryzias_melastigma
ENSRNOG00000001253	Eif3b	92	87.871	ENSOGAG00000006319	EIF3B	99	87.871	Otolemur_garnettii
ENSRNOG00000001253	Eif3b	84	91.272	ENSOARG00000005137	EIF3B	99	88.685	Ovis_aries
ENSRNOG00000001253	Eif3b	87	97.543	ENSPPAG00000032833	EIF3B	98	97.543	Pan_paniscus
ENSRNOG00000001253	Eif3b	100	88.889	ENSPPRG00000003071	EIF3B	100	89.139	Panthera_pardus
ENSRNOG00000001253	Eif3b	81	97.840	ENSPTIG00000013328	EIF3B	83	97.840	Panthera_tigris_altaica
ENSRNOG00000001253	Eif3b	100	90.049	ENSPTRG00000018860	EIF3B	100	90.295	Pan_troglodytes
ENSRNOG00000001253	Eif3b	100	90.049	ENSPTRG00000046041	-	100	90.295	Pan_troglodytes
ENSRNOG00000001253	Eif3b	100	89.788	ENSPANG00000014557	EIF3B	100	89.788	Papio_anubis
ENSRNOG00000001253	Eif3b	85	87.574	ENSPKIG00000011735	eif3bb	99	87.574	Paramormyrops_kingsleyae
ENSRNOG00000001253	Eif3b	83	88.200	ENSPKIG00000009981	eif3ba	98	88.527	Paramormyrops_kingsleyae
ENSRNOG00000001253	Eif3b	84	92.643	ENSPSIG00000009889	EIF3B	98	86.999	Pelodiscus_sinensis
ENSRNOG00000001253	Eif3b	83	87.519	ENSPMGG00000016466	eif3bb	99	87.519	Periophthalmus_magnuspinnatus
ENSRNOG00000001253	Eif3b	100	97.129	ENSPEMG00000021554	Eif3b	100	97.129	Peromyscus_maniculatus_bairdii
ENSRNOG00000001253	Eif3b	78	77.280	ENSPMAG00000005331	eif3bb	97	77.280	Petromyzon_marinus
ENSRNOG00000001253	Eif3b	81	97.685	ENSPCIG00000009464	EIF3B	98	97.685	Phascolarctos_cinereus
ENSRNOG00000001253	Eif3b	83	88.502	ENSPFOG00000001449	eif3bb	98	88.271	Poecilia_formosa
ENSRNOG00000001253	Eif3b	83	83.207	ENSPLAG00000005120	eif3bb	98	83.008	Poecilia_latipinna
ENSRNOG00000001253	Eif3b	83	88.351	ENSPMEG00000015157	eif3bb	99	88.120	Poecilia_mexicana
ENSRNOG00000001253	Eif3b	83	88.502	ENSPREG00000006422	eif3bb	98	88.271	Poecilia_reticulata
ENSRNOG00000001253	Eif3b	99	90.111	ENSPPYG00000017313	EIF3B	93	90.235	Pongo_abelii
ENSRNOG00000001253	Eif3b	53	98.969	ENSPCAG00000010455	-	70	98.969	Procavia_capensis
ENSRNOG00000001253	Eif3b	100	89.596	ENSPCOG00000025894	EIF3B	100	89.718	Propithecus_coquereli
ENSRNOG00000001253	Eif3b	81	97.664	ENSPVAG00000013735	EIF3B	92	97.664	Pteropus_vampyrus
ENSRNOG00000001253	Eif3b	83	74.130	ENSPNYG00000014859	eif3bb	98	73.985	Pundamilia_nyererei
ENSRNOG00000001253	Eif3b	84	87.444	ENSPNAG00000021677	eif3ba	98	87.444	Pygocentrus_nattereri
ENSRNOG00000001253	Eif3b	85	98.609	ENSRBIG00000030590	EIF3B	94	98.609	Rhinopithecus_bieti
ENSRNOG00000001253	Eif3b	100	90.418	ENSRROG00000035023	EIF3B	100	90.418	Rhinopithecus_roxellana
ENSRNOG00000001253	Eif3b	74	31.756	YOR361C	PRT1	85	31.756	Saccharomyces_cerevisiae
ENSRNOG00000001253	Eif3b	94	92.961	ENSSBOG00000001954	EIF3B	97	91.451	Saimiri_boliviensis_boliviensis
ENSRNOG00000001253	Eif3b	100	83.875	ENSSHAG00000001063	EIF3B	100	84.754	Sarcophilus_harrisii
ENSRNOG00000001253	Eif3b	83	88.805	ENSSFOG00015005824	eif3ba	98	88.191	Scleropages_formosus
ENSRNOG00000001253	Eif3b	83	88.872	ENSSFOG00015006390	eif3bb	98	88.872	Scleropages_formosus
ENSRNOG00000001253	Eif3b	83	85.865	ENSSMAG00000021264	eif3bb	98	85.865	Scophthalmus_maximus
ENSRNOG00000001253	Eif3b	83	88.048	ENSSDUG00000016761	eif3bb	98	87.820	Seriola_dumerili
ENSRNOG00000001253	Eif3b	83	87.897	ENSSLDG00000022874	eif3bb	98	87.669	Seriola_lalandi_dorsalis
ENSRNOG00000001253	Eif3b	81	97.040	ENSSARG00000006036	EIF3B	99	97.040	Sorex_araneus
ENSRNOG00000001253	Eif3b	82	92.530	ENSSPUG00000001870	EIF3B	99	93.210	Sphenodon_punctatus
ENSRNOG00000001253	Eif3b	83	88.048	ENSSPAG00000013403	eif3bb	98	87.820	Stegastes_partitus
ENSRNOG00000001253	Eif3b	100	88.045	ENSSSCG00000039390	EIF3B	100	88.792	Sus_scrofa
ENSRNOG00000001253	Eif3b	84	92.078	ENSTGUG00000008140	EIF3B	100	92.078	Taeniopygia_guttata
ENSRNOG00000001253	Eif3b	83	87.746	ENSTRUG00000011064	eif3bb	98	87.519	Takifugu_rubripes
ENSRNOG00000001253	Eif3b	83	86.507	ENSTNIG00000004648	eif3bb	99	86.507	Tetraodon_nigroviridis
ENSRNOG00000001253	Eif3b	99	79.038	ENSTBEG00000012836	EIF3B	93	79.038	Tupaia_belangeri
ENSRNOG00000001253	Eif3b	99	78.788	ENSTTRG00000014713	EIF3B	92	79.067	Tursiops_truncatus
ENSRNOG00000001253	Eif3b	100	81.305	ENSUAMG00000000800	EIF3B	99	96.951	Ursus_americanus
ENSRNOG00000001253	Eif3b	89	92.210	ENSUMAG00000007200	EIF3B	100	97.940	Ursus_maritimus
ENSRNOG00000001253	Eif3b	81	97.685	ENSVVUG00000004280	EIF3B	100	97.943	Vulpes_vulpes
ENSRNOG00000001253	Eif3b	83	90.137	ENSXETG00000020593	eif3b	99	88.576	Xenopus_tropicalis
ENSRNOG00000001253	Eif3b	81	86.957	ENSXCOG00000008279	eif3bb	98	86.466	Xiphophorus_couchianus
ENSRNOG00000001253	Eif3b	81	87.112	ENSXMAG00000004705	eif3bb	98	86.617	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001732	formation of cytoplasmic translation initiation complex	-	IEA	Process
GO:0003674	molecular_function	-	ND	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0003743	translation initiation factor activity	21873635.	IBA	Function
GO:0003743	translation initiation factor activity	-	ISO	Function
GO:0003743	translation initiation factor activity	-	ISO	Function
GO:0003743	translation initiation factor activity	-	ISS	Function
GO:0005515	protein binding	24882364.	IPI	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	21873635.	IBA	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	-	ISO	Component
GO:0005852	eukaryotic translation initiation factor 3 complex	-	ISS	Component
GO:0006413	translational initiation	21873635.	IBA	Process
GO:0006413	translational initiation	-	ISO	Process
GO:0006413	translational initiation	-	ISS	Process
GO:0006446	regulation of translational initiation	-	ISO	Process
GO:0006446	regulation of translational initiation	-	ISS	Process
GO:0008150	biological_process	-	ND	Process
GO:0016282	eukaryotic 43S preinitiation complex	-	IEA	Component
GO:0031369	translation initiation factor binding	-	IEA	Function
GO:0033290	eukaryotic 48S preinitiation complex	-	IEA	Component
GO:0045202	synapse	-	IEA	Component
GO:0045202	synapse	-	ISO	Component
GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m	-	IEA	Component
GO:0071541	eukaryotic translation initiation factor 3 complex, eIF3m	-	ISO	Component
GO:0075522	IRES-dependent viral translational initiation	-	IEA	Process
GO:0075522	IRES-dependent viral translational initiation	-	ISO	Process
GO:0075525	viral translational termination-reinitiation	-	IEA	Process
GO:0075525	viral translational termination-reinitiation	-	ISO	Process