EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000001387 (Gene tree)
Gene ID: 100910540
Gene Symbol: LOC100910540
Alias: LOC304361
Full Name: 7SK snRNA methylphosphate capping enzyme-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 4719 bases
Position: chr12:21981755-21986473
Accession: 6497906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001871	Bin3	PF06859.12	6.6e-42	1	1
ENSRNOP00000001871	Methyltransf_31	PF13847.6	4.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000001871	-	3103	XM_003751154	ENSRNOP00000001871	660 (aa)	XP_003751202	G3V656

Gene Model

Click here to download ENSRNOG00000001387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000001387's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000001387	LOC100910540	100	100.000	ENSRNOG00000045911	Mepce	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000001387	LOC100910540	100	86.107	ENSG00000146834	MEPCE	100	91.818	Homo_sapiens
ENSRNOG00000001387	LOC100910540	73	39.612	ENSAPOG00000009313	-	92	39.615	Acanthochromis_polyacanthus
ENSRNOG00000001387	LOC100910540	83	45.372	ENSAPOG00000005209	mepce	73	63.473	Acanthochromis_polyacanthus
ENSRNOG00000001387	LOC100910540	89	88.614	ENSAMEG00000015035	MEPCE	97	89.344	Ailuropoda_melanoleuca
ENSRNOG00000001387	LOC100910540	81	52.974	ENSACIG00000012358	mepce	83	53.039	Amphilophus_citrinellus
ENSRNOG00000001387	LOC100910540	84	38.879	ENSAOCG00000018483	-	92	40.490	Amphiprion_ocellaris
ENSRNOG00000001387	LOC100910540	81	44.175	ENSAOCG00000010256	mepce	85	42.974	Amphiprion_ocellaris
ENSRNOG00000001387	LOC100910540	84	38.462	ENSAOCG00000018539	si:ch1073-157b13.1	92	40.490	Amphiprion_ocellaris
ENSRNOG00000001387	LOC100910540	83	40.378	ENSAPEG00000021439	-	92	41.065	Amphiprion_percula
ENSRNOG00000001387	LOC100910540	80	63.253	ENSAPEG00000001077	mepce	73	63.253	Amphiprion_percula
ENSRNOG00000001387	LOC100910540	81	51.235	ENSATEG00000001673	-	80	50.920	Anabas_testudineus
ENSRNOG00000001387	LOC100910540	80	62.874	ENSATEG00000016877	mepce	74	62.874	Anabas_testudineus
ENSRNOG00000001387	LOC100910540	81	52.469	ENSATEG00000018752	si:ch1073-157b13.1	80	52.147	Anabas_testudineus
ENSRNOG00000001387	LOC100910540	83	60.141	ENSACAG00000011551	MEPCE	84	60.035	Anolis_carolinensis
ENSRNOG00000001387	LOC100910540	100	87.941	ENSANAG00000035127	MEPCE	100	87.500	Aotus_nancymaae
ENSRNOG00000001387	LOC100910540	81	48.867	ENSAMXG00000033849	si:ch1073-157b13.1	89	48.206	Astyanax_mexicanus
ENSRNOG00000001387	LOC100910540	82	46.035	ENSAMXG00000029308	mepce	52	65.385	Astyanax_mexicanus
ENSRNOG00000001387	LOC100910540	100	85.776	ENSBTAG00000016763	MEPCE	100	86.502	Bos_taurus
ENSRNOG00000001387	LOC100910540	100	87.941	ENSCJAG00000015348	MEPCE	100	87.647	Callithrix_jacchus
ENSRNOG00000001387	LOC100910540	100	85.447	ENSCAFG00000014458	MEPCE	100	85.879	Canis_familiaris
ENSRNOG00000001387	LOC100910540	100	85.447	ENSCAFG00020014018	MEPCE	100	85.879	Canis_lupus_dingo
ENSRNOG00000001387	LOC100910540	100	88.772	ENSCHIG00000008713	MEPCE	100	88.772	Capra_hircus
ENSRNOG00000001387	LOC100910540	100	86.784	ENSCPOG00000015225	MEPCE	100	86.784	Cavia_porcellus
ENSRNOG00000001387	LOC100910540	100	88.088	ENSCCAG00000028766	MEPCE	100	87.794	Cebus_capucinus
ENSRNOG00000001387	LOC100910540	100	87.977	ENSCATG00000027605	MEPCE	100	87.683	Cercocebus_atys
ENSRNOG00000001387	LOC100910540	100	87.915	ENSCLAG00000003470	MEPCE	100	88.369	Chinchilla_lanigera
ENSRNOG00000001387	LOC100910540	100	86.686	ENSCSAG00000017894	MEPCE	100	86.107	Chlorocebus_sabaeus
ENSRNOG00000001387	LOC100910540	89	91.356	ENSCANG00000030898	MEPCE	100	91.818	Colobus_angolensis_palliatus
ENSRNOG00000001387	LOC100910540	100	95.495	ENSCGRG00001008844	Mepce	100	95.495	Cricetulus_griseus_chok1gshd
ENSRNOG00000001387	LOC100910540	81	39.831	ENSCSEG00000005838	-	91	39.967	Cynoglossus_semilaevis
ENSRNOG00000001387	LOC100910540	81	56.853	ENSCSEG00000020220	mepce	56	68.041	Cynoglossus_semilaevis
ENSRNOG00000001387	LOC100910540	84	44.182	ENSCVAG00000001392	si:ch1073-157b13.1	93	42.809	Cyprinodon_variegatus
ENSRNOG00000001387	LOC100910540	81	47.276	ENSCVAG00000023449	mepce	86	45.915	Cyprinodon_variegatus
ENSRNOG00000001387	LOC100910540	81	50.269	ENSDARG00000035771	MEPCE	86	50.991	Danio_rerio
ENSRNOG00000001387	LOC100910540	100	86.124	ENSDORG00000005311	Mepce	100	90.625	Dipodomys_ordii
ENSRNOG00000001387	LOC100910540	53	35.328	FBgn0037368	CG1239	78	39.223	Drosophila_melanogaster
ENSRNOG00000001387	LOC100910540	90	84.615	ENSETEG00000001440	-	100	84.783	Echinops_telfairi
ENSRNOG00000001387	LOC100910540	51	38.889	ENSEBUG00000003854	-	62	38.889	Eptatretus_burgeri
ENSRNOG00000001387	LOC100910540	65	74.138	ENSEBUG00000002563	MEPCE	77	47.857	Eptatretus_burgeri
ENSRNOG00000001387	LOC100910540	100	87.083	ENSEASG00005017074	MEPCE	100	87.373	Equus_asinus_asinus
ENSRNOG00000001387	LOC100910540	100	87.083	ENSECAG00000024124	MEPCE	100	87.373	Equus_caballus
ENSRNOG00000001387	LOC100910540	81	60.622	ENSELUG00000018561	mepce	79	54.197	Esox_lucius
ENSRNOG00000001387	LOC100910540	100	86.831	ENSFCAG00000010803	MEPCE	100	86.541	Felis_catus
ENSRNOG00000001387	LOC100910540	85	90.283	ENSFDAG00000001651	MEPCE	99	90.636	Fukomys_damarensis
ENSRNOG00000001387	LOC100910540	82	44.544	ENSGALG00000048263	MEPCE	78	53.093	Gallus_gallus
ENSRNOG00000001387	LOC100910540	81	40.000	ENSGAFG00000020426	si:ch1073-157b13.1	94	40.177	Gambusia_affinis
ENSRNOG00000001387	LOC100910540	100	58.432	ENSGAGG00000016614	MEPCE	99	59.584	Gopherus_agassizii
ENSRNOG00000001387	LOC100910540	100	86.950	ENSGGOG00000005371	MEPCE	100	91.364	Gorilla_gorilla
ENSRNOG00000001387	LOC100910540	100	89.291	ENSHGLG00000011263	MEPCE	100	89.744	Heterocephalus_glaber_female
ENSRNOG00000001387	LOC100910540	89	91.864	ENSHGLG00100016274	MEPCE	98	92.034	Heterocephalus_glaber_male
ENSRNOG00000001387	LOC100910540	82	50.638	ENSHCOG00000001737	mepce	81	50.640	Hippocampus_comes
ENSRNOG00000001387	LOC100910540	76	40.842	ENSHCOG00000009246	-	89	40.257	Hippocampus_comes
ENSRNOG00000001387	LOC100910540	83	52.273	ENSIPUG00000003387	si:ch1073-157b13.1	83	50.877	Ictalurus_punctatus
ENSRNOG00000001387	LOC100910540	100	89.365	ENSSTOG00000007568	MEPCE	100	89.217	Ictidomys_tridecemlineatus
ENSRNOG00000001387	LOC100910540	100	85.498	ENSJJAG00000010924	Mepce	100	85.650	Jaculus_jaculus
ENSRNOG00000001387	LOC100910540	85	38.769	ENSKMAG00000007072	-	94	39.404	Kryptolebias_marmoratus
ENSRNOG00000001387	LOC100910540	75	65.244	ENSKMAG00000010102	mepce	73	65.244	Kryptolebias_marmoratus
ENSRNOG00000001387	LOC100910540	63	75.556	ENSLACG00000012355	MEPCE	93	75.000	Latimeria_chalumnae
ENSRNOG00000001387	LOC100910540	100	88.262	ENSLAFG00000012347	MEPCE	100	88.559	Loxodonta_africana
ENSRNOG00000001387	LOC100910540	100	88.253	ENSMFAG00000003007	MEPCE	100	87.959	Macaca_fascicularis
ENSRNOG00000001387	LOC100910540	100	88.253	ENSMMUG00000012724	MEPCE	100	87.959	Macaca_mulatta
ENSRNOG00000001387	LOC100910540	100	88.253	ENSMNEG00000038460	MEPCE	100	87.959	Macaca_nemestrina
ENSRNOG00000001387	LOC100910540	85	93.023	ENSMLEG00000043318	MEPCE	100	93.023	Mandrillus_leucophaeus
ENSRNOG00000001387	LOC100910540	77	50.610	ENSMAMG00000011139	si:ch1073-157b13.1	75	50.303	Mastacembelus_armatus
ENSRNOG00000001387	LOC100910540	81	62.570	ENSMAMG00000017139	mepce	99	59.389	Mastacembelus_armatus
ENSRNOG00000001387	LOC100910540	100	92.308	ENSMAUG00000001456	Mepce	100	93.213	Mesocricetus_auratus
ENSRNOG00000001387	LOC100910540	100	87.373	ENSMICG00000030166	MEPCE	100	87.663	Microcebus_murinus
ENSRNOG00000001387	LOC100910540	100	95.613	ENSMOCG00000015013	Mepce	100	95.461	Microtus_ochrogaster
ENSRNOG00000001387	LOC100910540	81	50.089	ENSMMOG00000016706	mepce	83	47.780	Mola_mola
ENSRNOG00000001387	LOC100910540	82	41.312	ENSMMOG00000011072	-	91	41.331	Mola_mola
ENSRNOG00000001387	LOC100910540	100	77.047	ENSMODG00000004457	MEPCE	100	75.872	Monodelphis_domestica
ENSRNOG00000001387	LOC100910540	83	41.558	ENSMALG00000004684	si:ch1073-157b13.1	90	41.186	Monopterus_albus
ENSRNOG00000001387	LOC100910540	100	96.541	MGP_CAROLIEiJ_G0027892	Mepce	100	96.875	Mus_caroli
ENSRNOG00000001387	LOC100910540	100	96.697	ENSMUSG00000029726	Mepce	100	96.875	Mus_musculus
ENSRNOG00000001387	LOC100910540	100	96.988	MGP_SPRETEiJ_G0028897	Mepce	100	96.988	Mus_spretus
ENSRNOG00000001387	LOC100910540	100	86.619	ENSMPUG00000015673	MEPCE	100	85.899	Mustela_putorius_furo
ENSRNOG00000001387	LOC100910540	100	84.402	ENSMLUG00000009678	MEPCE	100	83.528	Myotis_lucifugus
ENSRNOG00000001387	LOC100910540	100	91.679	ENSNGAG00000007098	Mepce	100	91.528	Nannospalax_galili
ENSRNOG00000001387	LOC100910540	78	42.173	ENSNBRG00000006332	-	85	41.711	Neolamprologus_brichardi
ENSRNOG00000001387	LOC100910540	84	93.103	ENSNLEG00000011734	MEPCE	96	93.103	Nomascus_leucogenys
ENSRNOG00000001387	LOC100910540	82	71.157	ENSMEUG00000001370	MEPCE	100	70.639	Notamacropus_eugenii
ENSRNOG00000001387	LOC100910540	100	81.241	ENSOPRG00000014811	MEPCE	100	83.752	Ochotona_princeps
ENSRNOG00000001387	LOC100910540	100	89.124	ENSODEG00000016662	MEPCE	100	88.822	Octodon_degus
ENSRNOG00000001387	LOC100910540	81	41.552	ENSONIG00000009135	-	94	42.399	Oreochromis_niloticus
ENSRNOG00000001387	LOC100910540	79	55.056	ENSONIG00000005231	mepce	100	54.104	Oreochromis_niloticus
ENSRNOG00000001387	LOC100910540	100	82.186	ENSOCUG00000029324	MEPCE	100	82.563	Oryctolagus_cuniculus
ENSRNOG00000001387	LOC100910540	81	40.497	ENSOMEG00000007393	si:ch1073-157b13.1	89	42.152	Oryzias_melastigma
ENSRNOG00000001387	LOC100910540	100	88.071	ENSOGAG00000034770	MEPCE	100	86.745	Otolemur_garnettii
ENSRNOG00000001387	LOC100910540	100	87.015	ENSOARG00000016948	MEPCE	100	87.313	Ovis_aries
ENSRNOG00000001387	LOC100910540	100	86.522	ENSPPAG00000031579	MEPCE	100	85.797	Pan_paniscus
ENSRNOG00000001387	LOC100910540	100	87.246	ENSPPRG00000002350	MEPCE	100	91.364	Panthera_pardus
ENSRNOG00000001387	LOC100910540	100	87.537	ENSPTRG00000019487	MEPCE	100	86.950	Pan_troglodytes
ENSRNOG00000001387	LOC100910540	100	87.537	ENSPTRG00000050679	-	100	86.950	Pan_troglodytes
ENSRNOG00000001387	LOC100910540	100	88.253	ENSPANG00000022874	MEPCE	100	87.959	Papio_anubis
ENSRNOG00000001387	LOC100910540	81	65.663	ENSPKIG00000006607	mepce	74	65.663	Paramormyrops_kingsleyae
ENSRNOG00000001387	LOC100910540	91	48.116	ENSPKIG00000021740	MEPCE	87	48.811	Paramormyrops_kingsleyae
ENSRNOG00000001387	LOC100910540	90	64.763	ENSPSIG00000007183	MEPCE	91	64.841	Pelodiscus_sinensis
ENSRNOG00000001387	LOC100910540	81	51.820	ENSPMGG00000008592	mepce	84	50.868	Periophthalmus_magnuspinnatus
ENSRNOG00000001387	LOC100910540	57	34.739	ENSPMGG00000021503	-	65	39.394	Periophthalmus_magnuspinnatus
ENSRNOG00000001387	LOC100910540	100	96.692	ENSPEMG00000003157	Mepce	100	96.692	Peromyscus_maniculatus_bairdii
ENSRNOG00000001387	LOC100910540	100	76.385	ENSPCIG00000012285	MEPCE	100	75.072	Phascolarctos_cinereus
ENSRNOG00000001387	LOC100910540	79	52.110	ENSPFOG00000019428	mepce	54	59.794	Poecilia_formosa
ENSRNOG00000001387	LOC100910540	84	41.781	ENSPFOG00000016062	si:ch1073-157b13.1	96	41.824	Poecilia_formosa
ENSRNOG00000001387	LOC100910540	84	41.176	ENSPLAG00000017448	si:ch1073-157b13.1	94	41.480	Poecilia_latipinna
ENSRNOG00000001387	LOC100910540	82	46.594	ENSPLAG00000014396	mepce	73	64.072	Poecilia_latipinna
ENSRNOG00000001387	LOC100910540	84	41.349	ENSPMEG00000003971	si:ch1073-157b13.1	94	39.932	Poecilia_mexicana
ENSRNOG00000001387	LOC100910540	80	49.912	ENSPMEG00000013697	mepce	91	50.179	Poecilia_mexicana
ENSRNOG00000001387	LOC100910540	79	47.134	ENSPREG00000023111	mepce	74	64.072	Poecilia_reticulata
ENSRNOG00000001387	LOC100910540	65	57.516	ENSPREG00000012073	-	80	57.516	Poecilia_reticulata
ENSRNOG00000001387	LOC100910540	100	85.962	ENSPPYG00000017411	MEPCE	100	85.962	Pongo_abelii
ENSRNOG00000001387	LOC100910540	100	89.706	ENSPCOG00000020884	MEPCE	100	89.559	Propithecus_coquereli
ENSRNOG00000001387	LOC100910540	100	83.186	ENSPVAG00000011996	MEPCE	100	82.891	Pteropus_vampyrus
ENSRNOG00000001387	LOC100910540	78	41.199	ENSPNYG00000001274	-	85	41.336	Pundamilia_nyererei
ENSRNOG00000001387	LOC100910540	81	48.529	ENSPNAG00000013102	si:ch1073-157b13.1	85	47.209	Pygocentrus_nattereri
ENSRNOG00000001387	LOC100910540	81	67.066	ENSPNAG00000015662	mepce	50	67.470	Pygocentrus_nattereri
ENSRNOG00000001387	LOC100910540	100	87.097	ENSRBIG00000027050	MEPCE	100	86.804	Rhinopithecus_bieti
ENSRNOG00000001387	LOC100910540	80	77.091	ENSRBIG00000032270	-	95	76.642	Rhinopithecus_bieti
ENSRNOG00000001387	LOC100910540	100	88.253	ENSRROG00000031225	MEPCE	100	87.959	Rhinopithecus_roxellana
ENSRNOG00000001387	LOC100910540	100	85.217	ENSSBOG00000011382	MEPCE	100	91.364	Saimiri_boliviensis_boliviensis
ENSRNOG00000001387	LOC100910540	79	66.667	ENSSFOG00015018048	mepce	67	66.667	Scleropages_formosus
ENSRNOG00000001387	LOC100910540	79	38.743	ENSSMAG00000004830	-	92	39.604	Scophthalmus_maximus
ENSRNOG00000001387	LOC100910540	78	38.920	ENSSDUG00000006422	-	83	41.055	Seriola_dumerili
ENSRNOG00000001387	LOC100910540	78	63.473	ENSSDUG00000008253	mepce	74	63.473	Seriola_dumerili
ENSRNOG00000001387	LOC100910540	72	38.330	ENSSLDG00000019673	-	62	41.912	Seriola_lalandi_dorsalis
ENSRNOG00000001387	LOC100910540	56	63.473	ENSSLDG00000020120	mepce	55	67.000	Seriola_lalandi_dorsalis
ENSRNOG00000001387	LOC100910540	100	81.420	ENSSARG00000003253	MEPCE	100	82.175	Sorex_araneus
ENSRNOG00000001387	LOC100910540	87	55.882	ENSSPUG00000004856	MEPCE	76	55.935	Sphenodon_punctatus
ENSRNOG00000001387	LOC100910540	81	46.759	ENSSPAG00000001215	mepce	73	63.473	Stegastes_partitus
ENSRNOG00000001387	LOC100910540	83	40.407	ENSSPAG00000008313	-	92	41.438	Stegastes_partitus
ENSRNOG00000001387	LOC100910540	100	84.682	ENSSSCG00000023680	MEPCE	100	85.694	Sus_scrofa
ENSRNOG00000001387	LOC100910540	81	40.917	ENSTRUG00000001890	-	95	40.895	Takifugu_rubripes
ENSRNOG00000001387	LOC100910540	81	52.555	ENSTNIG00000010046	mepce	100	51.934	Tetraodon_nigroviridis
ENSRNOG00000001387	LOC100910540	100	83.885	ENSTTRG00000008873	MEPCE	100	84.460	Tursiops_truncatus
ENSRNOG00000001387	LOC100910540	91	85.290	ENSUAMG00000026470	MEPCE	98	85.759	Ursus_americanus
ENSRNOG00000001387	LOC100910540	92	86.720	ENSUMAG00000010719	MEPCE	91	89.601	Ursus_maritimus
ENSRNOG00000001387	LOC100910540	100	85.366	ENSVVUG00000023418	MEPCE	100	85.653	Vulpes_vulpes
ENSRNOG00000001387	LOC100910540	63	50.610	ENSXCOG00000013140	-	78	47.418	Xiphophorus_couchianus
ENSRNOG00000001387	LOC100910540	79	51.786	ENSXCOG00000007070	mepce	89	49.826	Xiphophorus_couchianus
ENSRNOG00000001387	LOC100910540	79	47.480	ENSXMAG00000027456	mepce	74	63.473	Xiphophorus_maculatus
ENSRNOG00000001387	LOC100910540	81	40.687	ENSXMAG00000016250	si:ch1073-157b13.1	95	40.792	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001510	RNA methylation	-	IEA	Process