EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000001456 (Gene tree)
Gene ID: 25281
Gene Symbol: Nup153
Alias: -
Full Name: nucleoporin 153
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 52657 bases
Position: chr17:18358712-18411368
Accession: 3216
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000001979	zf-RanBP	PF00641.18	5.7e-44	1	4
ENSRNOP00000001979	zf-RanBP	PF00641.18	5.7e-44	2	4
ENSRNOP00000001979	zf-RanBP	PF00641.18	5.7e-44	3	4
ENSRNOP00000001979	zf-RanBP	PF00641.18	5.7e-44	4	4

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000001979	-	6206	XM_008771532	ENSRNOP00000001979	1468 (aa)	-	G3V662

Gene Model

Click here to download ENSRNOG00000001456's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000001456's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000001456	Nup153	99	80.887	ENSG00000124789	NUP153	99	81.297	Homo_sapiens
ENSRNOG00000001456	Nup153	99	78.912	ENSAMEG00000000721	NUP153	99	78.639	Ailuropoda_melanoleuca
ENSRNOG00000001456	Nup153	59	47.793	ENSATEG00000014134	nup153	99	40.062	Anabas_testudineus
ENSRNOG00000001456	Nup153	97	53.401	ENSACAG00000004118	NUP153	100	54.228	Anolis_carolinensis
ENSRNOG00000001456	Nup153	99	81.310	ENSANAG00000001808	NUP153	99	81.037	Aotus_nancymaae
ENSRNOG00000001456	Nup153	99	41.243	ENSACLG00000016592	nup153	99	40.507	Astatotilapia_calliptera
ENSRNOG00000001456	Nup153	99	38.104	ENSAMXG00000021025	nup153	99	41.320	Astyanax_mexicanus
ENSRNOG00000001456	Nup153	99	80.408	ENSBTAG00000017128	NUP153	99	80.272	Bos_taurus
ENSRNOG00000001456	Nup153	99	81.459	ENSCJAG00000006685	NUP153	99	80.641	Callithrix_jacchus
ENSRNOG00000001456	Nup153	99	79.374	ENSCAFG00000010146	NUP153	100	80.535	Canis_familiaris
ENSRNOG00000001456	Nup153	99	80.041	ENSCAFG00020010901	NUP153	99	80.654	Canis_lupus_dingo
ENSRNOG00000001456	Nup153	99	80.599	ENSCHIG00000023764	NUP153	99	80.259	Capra_hircus
ENSRNOG00000001456	Nup153	97	80.263	ENSTSYG00000001251	NUP153	98	79.848	Carlito_syrichta
ENSRNOG00000001456	Nup153	99	78.883	ENSCPOG00000004007	NUP153	99	78.065	Cavia_porcellus
ENSRNOG00000001456	Nup153	99	78.513	ENSCCAG00000024038	NUP153	100	79.317	Cebus_capucinus
ENSRNOG00000001456	Nup153	99	81.378	ENSCATG00000041429	NUP153	99	81.446	Cercocebus_atys
ENSRNOG00000001456	Nup153	99	79.400	ENSCLAG00000001915	NUP153	99	79.332	Chinchilla_lanigera
ENSRNOG00000001456	Nup153	99	81.148	ENSCSAG00000007624	NUP153	99	81.284	Chlorocebus_sabaeus
ENSRNOG00000001456	Nup153	58	61.891	ENSCHOG00000013388	-	99	61.175	Choloepus_hoffmanni
ENSRNOG00000001456	Nup153	86	55.747	ENSCHOG00000003510	-	99	55.668	Choloepus_hoffmanni
ENSRNOG00000001456	Nup153	86	52.510	ENSCHOG00000008316	-	99	55.434	Choloepus_hoffmanni
ENSRNOG00000001456	Nup153	79	55.348	ENSCHOG00000007137	-	99	55.047	Choloepus_hoffmanni
ENSRNOG00000001456	Nup153	62	47.558	ENSCHOG00000009608	-	94	51.873	Choloepus_hoffmanni
ENSRNOG00000001456	Nup153	99	63.538	ENSCPBG00000008333	NUP153	99	62.593	Chrysemys_picta_bellii
ENSRNOG00000001456	Nup153	99	77.838	ENSCANG00000033390	NUP153	99	77.770	Colobus_angolensis_palliatus
ENSRNOG00000001456	Nup153	99	90.254	ENSCGRG00001021016	Nup153	99	90.254	Cricetulus_griseus_chok1gshd
ENSRNOG00000001456	Nup153	97	90.098	ENSCGRG00000009244	Nup153	100	90.098	Cricetulus_griseus_crigri
ENSRNOG00000001456	Nup153	99	41.651	ENSCSEG00000017912	nup153	98	41.131	Cynoglossus_semilaevis
ENSRNOG00000001456	Nup153	90	39.767	ENSCVAG00000020646	nup153	98	39.893	Cyprinodon_variegatus
ENSRNOG00000001456	Nup153	99	41.256	ENSDARG00000099972	nup153	99	40.641	Danio_rerio
ENSRNOG00000001456	Nup153	99	79.073	ENSDNOG00000001153	NUP153	99	79.414	Dasypus_novemcinctus
ENSRNOG00000001456	Nup153	99	80.313	ENSDORG00000001736	Nup153	99	80.586	Dipodomys_ordii
ENSRNOG00000001456	Nup153	79	85.882	ENSETEG00000010324	-	76	85.882	Echinops_telfairi
ENSRNOG00000001456	Nup153	99	80.709	ENSEASG00005009945	NUP153	99	80.368	Equus_asinus_asinus
ENSRNOG00000001456	Nup153	99	80.777	ENSECAG00000016010	NUP153	99	80.436	Equus_caballus
ENSRNOG00000001456	Nup153	73	85.763	ENSEEUG00000010183	NUP153	75	84.407	Erinaceus_europaeus
ENSRNOG00000001456	Nup153	99	40.941	ENSELUG00000019108	nup153	99	40.548	Esox_lucius
ENSRNOG00000001456	Nup153	99	80.286	ENSFCAG00000011583	NUP153	99	80.286	Felis_catus
ENSRNOG00000001456	Nup153	95	57.917	ENSFALG00000013388	NUP153	99	57.595	Ficedula_albicollis
ENSRNOG00000001456	Nup153	91	50.355	ENSFHEG00000013401	nup153	99	50.119	Fundulus_heteroclitus
ENSRNOG00000001456	Nup153	77	45.243	ENSGMOG00000010422	nup153	92	43.034	Gadus_morhua
ENSRNOG00000001456	Nup153	99	62.137	ENSGALG00000012720	NUP153	99	61.653	Gallus_gallus
ENSRNOG00000001456	Nup153	99	38.496	ENSGAFG00000010927	nup153	99	38.555	Gambusia_affinis
ENSRNOG00000001456	Nup153	99	63.165	ENSGAGG00000022386	NUP153	99	62.559	Gopherus_agassizii
ENSRNOG00000001456	Nup153	99	80.286	ENSGGOG00000014261	NUP153	99	80.491	Gorilla_gorilla
ENSRNOG00000001456	Nup153	99	41.106	ENSHBUG00000002944	nup153	98	40.915	Haplochromis_burtoni
ENSRNOG00000001456	Nup153	99	79.440	ENSHGLG00000007924	NUP153	99	79.235	Heterocephalus_glaber_female
ENSRNOG00000001456	Nup153	99	79.440	ENSHGLG00100001529	NUP153	99	79.235	Heterocephalus_glaber_male
ENSRNOG00000001456	Nup153	99	38.777	ENSHCOG00000019361	nup153	99	39.715	Hippocampus_comes
ENSRNOG00000001456	Nup153	99	42.748	ENSIPUG00000014605	nup153	99	42.125	Ictalurus_punctatus
ENSRNOG00000001456	Nup153	97	80.820	ENSSTOG00000005807	NUP153	100	80.125	Ictidomys_tridecemlineatus
ENSRNOG00000001456	Nup153	99	80.205	ENSJJAG00000016760	Nup153	99	80.274	Jaculus_jaculus
ENSRNOG00000001456	Nup153	99	39.725	ENSKMAG00000006344	nup153	99	40.412	Kryptolebias_marmoratus
ENSRNOG00000001456	Nup153	99	39.541	ENSLBEG00000002982	nup153	98	40.265	Labrus_bergylta
ENSRNOG00000001456	Nup153	97	45.576	ENSLACG00000006480	NUP153	100	45.509	Latimeria_chalumnae
ENSRNOG00000001456	Nup153	99	46.204	ENSLOCG00000008267	nup153	99	45.460	Lepisosteus_oculatus
ENSRNOG00000001456	Nup153	99	79.837	ENSLAFG00000015905	NUP153	99	79.252	Loxodonta_africana
ENSRNOG00000001456	Nup153	99	81.514	ENSMFAG00000045732	NUP153	99	81.583	Macaca_fascicularis
ENSRNOG00000001456	Nup153	99	81.446	ENSMMUG00000001993	NUP153	99	81.514	Macaca_mulatta
ENSRNOG00000001456	Nup153	99	81.514	ENSMNEG00000038011	NUP153	99	81.583	Macaca_nemestrina
ENSRNOG00000001456	Nup153	99	81.719	ENSMLEG00000030776	NUP153	99	81.514	Mandrillus_leucophaeus
ENSRNOG00000001456	Nup153	99	40.490	ENSMZEG00005004371	nup153	99	40.038	Maylandia_zebra
ENSRNOG00000001456	Nup153	97	60.560	ENSMGAG00000003139	NUP153	100	61.264	Meleagris_gallopavo
ENSRNOG00000001456	Nup153	87	89.478	ENSMAUG00000007737	Nup153	96	89.874	Mesocricetus_auratus
ENSRNOG00000001456	Nup153	99	81.638	ENSMICG00000006089	NUP153	99	81.638	Microcebus_murinus
ENSRNOG00000001456	Nup153	99	89.148	ENSMOCG00000007623	Nup153	99	89.011	Microtus_ochrogaster
ENSRNOG00000001456	Nup153	99	38.639	ENSMMOG00000019049	nup153	99	38.972	Mola_mola
ENSRNOG00000001456	Nup153	97	68.909	ENSMODG00000010951	NUP153	99	68.703	Monodelphis_domestica
ENSRNOG00000001456	Nup153	99	93.393	MGP_CAROLIEiJ_G0018483	Nup153	99	93.531	Mus_caroli
ENSRNOG00000001456	Nup153	100	93.801	ENSMUSG00000021374	Nup153	99	93.668	Mus_musculus
ENSRNOG00000001456	Nup153	99	94.632	MGP_PahariEiJ_G0019551	Nup153	99	94.563	Mus_pahari
ENSRNOG00000001456	Nup153	99	93.599	MGP_SPRETEiJ_G0019363	Nup153	99	93.737	Mus_spretus
ENSRNOG00000001456	Nup153	99	83.390	ENSNGAG00000013817	Nup153	99	83.664	Nannospalax_galili
ENSRNOG00000001456	Nup153	99	39.228	ENSNBRG00000012456	nup153	99	39.502	Neolamprologus_brichardi
ENSRNOG00000001456	Nup153	99	81.595	ENSNLEG00000001141	NUP153	99	81.254	Nomascus_leucogenys
ENSRNOG00000001456	Nup153	87	85.185	ENSMEUG00000012874	NUP153	76	85.185	Notamacropus_eugenii
ENSRNOG00000001456	Nup153	85	74.335	ENSOPRG00000006221	NUP153	86	74.593	Ochotona_princeps
ENSRNOG00000001456	Nup153	99	75.307	ENSODEG00000005620	NUP153	99	75.239	Octodon_degus
ENSRNOG00000001456	Nup153	99	42.001	ENSONIG00000002524	nup153	99	42.173	Oreochromis_niloticus
ENSRNOG00000001456	Nup153	97	63.190	ENSOANG00000011858	NUP153	99	63.834	Ornithorhynchus_anatinus
ENSRNOG00000001456	Nup153	99	77.362	ENSOCUG00000003064	NUP153	99	76.447	Oryctolagus_cuniculus
ENSRNOG00000001456	Nup153	99	39.810	ENSORLG00000012674	nup153	99	39.468	Oryzias_latipes
ENSRNOG00000001456	Nup153	99	39.848	ENSORLG00020006026	nup153	98	38.947	Oryzias_latipes_hni
ENSRNOG00000001456	Nup153	99	39.342	ENSORLG00015013823	nup153	98	38.976	Oryzias_latipes_hsok
ENSRNOG00000001456	Nup153	60	47.448	ENSOMEG00000012062	nup153	99	39.674	Oryzias_melastigma
ENSRNOG00000001456	Nup153	99	79.008	ENSOARG00000011514	NUP153	100	78.955	Ovis_aries
ENSRNOG00000001456	Nup153	99	80.764	ENSPPAG00000029729	NUP153	99	81.378	Pan_paniscus
ENSRNOG00000001456	Nup153	99	79.810	ENSPPRG00000006160	NUP153	99	80.150	Panthera_pardus
ENSRNOG00000001456	Nup153	99	79.334	ENSPTIG00000017212	NUP153	99	79.674	Panthera_tigris_altaica
ENSRNOG00000001456	Nup153	99	80.900	ENSPTRG00000017752	NUP153	99	81.514	Pan_troglodytes
ENSRNOG00000001456	Nup153	99	81.378	ENSPANG00000015139	NUP153	99	81.446	Papio_anubis
ENSRNOG00000001456	Nup153	99	41.544	ENSPKIG00000001734	nup153	74	43.506	Paramormyrops_kingsleyae
ENSRNOG00000001456	Nup153	97	62.586	ENSPSIG00000017226	NUP153	100	61.554	Pelodiscus_sinensis
ENSRNOG00000001456	Nup153	99	40.140	ENSPMGG00000001716	nup153	99	39.013	Periophthalmus_magnuspinnatus
ENSRNOG00000001456	Nup153	99	90.185	ENSPEMG00000020772	Nup153	99	89.911	Peromyscus_maniculatus_bairdii
ENSRNOG00000001456	Nup153	57	35.947	ENSPMAG00000002487	-	100	37.063	Petromyzon_marinus
ENSRNOG00000001456	Nup153	99	68.456	ENSPCIG00000029680	NUP153	99	68.523	Phascolarctos_cinereus
ENSRNOG00000001456	Nup153	99	40.349	ENSPMEG00000021677	nup153	98	38.466	Poecilia_mexicana
ENSRNOG00000001456	Nup153	99	40.494	ENSPREG00000007463	nup153	98	39.259	Poecilia_reticulata
ENSRNOG00000001456	Nup153	99	79.468	ENSPPYG00000016259	NUP153	99	78.255	Pongo_abelii
ENSRNOG00000001456	Nup153	75	95.833	ENSPCAG00000010444	NUP153	74	95.833	Procavia_capensis
ENSRNOG00000001456	Nup153	99	79.522	ENSPCOG00000014488	NUP153	99	79.044	Propithecus_coquereli
ENSRNOG00000001456	Nup153	93	78.043	ENSPVAG00000012632	NUP153	99	77.464	Pteropus_vampyrus
ENSRNOG00000001456	Nup153	99	41.092	ENSPNYG00000011225	nup153	99	40.672	Pundamilia_nyererei
ENSRNOG00000001456	Nup153	99	41.009	ENSPNAG00000024377	nup153	99	40.727	Pygocentrus_nattereri
ENSRNOG00000001456	Nup153	99	80.464	ENSRBIG00000041878	NUP153	99	80.601	Rhinopithecus_bieti
ENSRNOG00000001456	Nup153	98	80.788	ENSRROG00000029849	NUP153	99	81.293	Rhinopithecus_roxellana
ENSRNOG00000001456	Nup153	99	81.936	ENSSBOG00000024532	NUP153	99	81.527	Saimiri_boliviensis_boliviensis
ENSRNOG00000001456	Nup153	61	66.118	ENSSHAG00000016087	-	97	65.899	Sarcophilus_harrisii
ENSRNOG00000001456	Nup153	99	40.761	ENSSFOG00015011040	nup153	99	40.472	Scleropages_formosus
ENSRNOG00000001456	Nup153	59	48.321	ENSSDUG00000010779	nup153	99	40.151	Seriola_dumerili
ENSRNOG00000001456	Nup153	59	47.339	ENSSLDG00000012692	nup153	78	42.451	Seriola_lalandi_dorsalis
ENSRNOG00000001456	Nup153	97	71.438	ENSSARG00000013269	NUP153	100	71.992	Sorex_araneus
ENSRNOG00000001456	Nup153	99	61.186	ENSSPUG00000016687	NUP153	98	60.216	Sphenodon_punctatus
ENSRNOG00000001456	Nup153	99	80.764	ENSSSCG00000026034	NUP153	99	80.900	Sus_scrofa
ENSRNOG00000001456	Nup153	97	58.151	ENSTGUG00000005917	NUP153	100	57.671	Taeniopygia_guttata
ENSRNOG00000001456	Nup153	99	38.481	ENSTRUG00000010163	nup153	99	38.217	Takifugu_rubripes
ENSRNOG00000001456	Nup153	99	40.842	ENSTNIG00000009182	nup153	99	39.924	Tetraodon_nigroviridis
ENSRNOG00000001456	Nup153	67	82.436	ENSTBEG00000004161	NUP153	68	80.453	Tupaia_belangeri
ENSRNOG00000001456	Nup153	94	77.331	ENSTTRG00000007060	NUP153	88	79.221	Tursiops_truncatus
ENSRNOG00000001456	Nup153	61	75.497	ENSUAMG00000015215	NUP153	98	75.661	Ursus_americanus
ENSRNOG00000001456	Nup153	98	76.312	ENSUMAG00000017135	NUP153	99	75.898	Ursus_maritimus
ENSRNOG00000001456	Nup153	99	81.514	ENSVPAG00000002072	NUP153	99	81.378	Vicugna_pacos
ENSRNOG00000001456	Nup153	99	80.381	ENSVVUG00000003265	NUP153	100	80.312	Vulpes_vulpes
ENSRNOG00000001456	Nup153	99	47.149	ENSXETG00000014197	nup153	99	46.515	Xenopus_tropicalis
ENSRNOG00000001456	Nup153	99	39.848	ENSXCOG00000020098	nup153	99	38.847	Xiphophorus_couchianus
ENSRNOG00000001456	Nup153	99	41.029	ENSXMAG00000003437	nup153	98	38.683	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000278	mitotic cell cycle	10362555.	IDA	Process
GO:0003682	chromatin binding	10362555.	IDA	Function
GO:0003690	double-stranded DNA binding	8422679.	IDA	Function
GO:0005515	protein binding	9531546.11266456.18611384.	IPI	Function
GO:0005642	annulate lamellae	8832404.	IDA	Component
GO:0005643	nuclear pore	15703211.	IDA	Component
GO:0005643	nuclear pore	-	ISO	Component
GO:0005643	nuclear pore	-	ISS	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0006913	nucleocytoplasmic transport	-	IEA	Process
GO:0008139	nuclear localization sequence binding	21873635.	IBA	Function
GO:0008139	nuclear localization sequence binding	7878057.	IDA	Function
GO:0008270	zinc ion binding	19505478.	IDA	Function
GO:0008536	Ran GTPase binding	19505478.	IPI	Function
GO:0015288	porin activity	-	IEA	Function
GO:0017056	structural constituent of nuclear pore	21873635.	IBA	Function
GO:0017056	structural constituent of nuclear pore	-	IEA	Function
GO:0017056	structural constituent of nuclear pore	-	ISO	Function
GO:0017056	structural constituent of nuclear pore	-	ISS	Function
GO:0031965	nuclear membrane	11839768.	IDA	Component
GO:0031965	nuclear membrane	-	IEA	Component
GO:0031965	nuclear membrane	-	ISO	Component
GO:0031965	nuclear membrane	-	ISS	Component
GO:0032991	protein-containing complex	19505478.	IDA	Component
GO:0034399	nuclear periphery	11839768.	IDA	Component
GO:0034399	nuclear periphery	-	IEA	Component
GO:0034399	nuclear periphery	-	ISO	Component
GO:0034399	nuclear periphery	-	ISS	Component
GO:0042405	nuclear inclusion body	11839768.	IDA	Component
GO:0042405	nuclear inclusion body	-	IEA	Component
GO:0042405	nuclear inclusion body	-	ISO	Component
GO:0042802	identical protein binding	-	IEA	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0043495	protein membrane anchor	-	IEA	Function
GO:0043495	protein membrane anchor	-	ISO	Function
GO:0043495	protein membrane anchor	-	ISS	Function
GO:0044613	nuclear pore central transport channel	21873635.	IBA	Component
GO:0044615	nuclear pore nuclear basket	21873635.	IBA	Component
GO:0044615	nuclear pore nuclear basket	11839768.	IDA	Component
GO:0044615	nuclear pore nuclear basket	-	IEA	Component
GO:0044615	nuclear pore nuclear basket	-	ISO	Component
GO:0046832	negative regulation of RNA export from nucleus	-	IEA	Process
GO:0046832	negative regulation of RNA export from nucleus	-	ISO	Process
GO:0046832	negative regulation of RNA export from nucleus	-	ISS	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0046930	pore complex	-	IEA	Component
GO:0051028	mRNA transport	-	IEA	Process
GO:0051292	nuclear pore complex assembly	-	IEA	Process
GO:0051292	nuclear pore complex assembly	-	ISO	Process
GO:0051292	nuclear pore complex assembly	-	ISS	Process
GO:0055085	transmembrane transport	-	IEA	Process
GO:1990875	nucleoplasmic side of nuclear pore	8422679.	IDA	Component