EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000001748 (Gene tree)
Gene ID: 100912534
Gene Symbol: LOC100912534
Alias: LOC498109|RGD1561203|RPB17
Full Name: DNA-directed RNA polymerases I%2C II%2C and III subunit RPABC3-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 4449 bases
Position: chr11:82856529-82860977
Accession: 6486461
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000002382	RNA_pol_Rpb8	PF03870.15	6.5e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000002382	-	790	XM_003751083	ENSRNOP00000002382	150 (aa)	XP_003751131	G3V678

Gene Model

Click here to download ENSRNOG00000001748's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03020	RNA polymerase	KEGG
rno04623	Cytosolic DNA-sensing pathway	KEGG
rno05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000001748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000001748	LOC100912534	100	100.000	ENSRNOG00000049116	Polr2h	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000001748	LOC100912534	100	100.000	ENSG00000163882	POLR2H	100	100.000	Homo_sapiens
ENSRNOG00000001748	LOC100912534	100	96.667	ENSAPOG00000023660	polr2h	100	96.667	Acanthochromis_polyacanthus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSAMEG00000017011	POLR2H	100	100.000	Ailuropoda_melanoleuca
ENSRNOG00000001748	LOC100912534	76	94.737	ENSACIG00000013167	polr2h	100	94.737	Amphilophus_citrinellus
ENSRNOG00000001748	LOC100912534	100	96.667	ENSAOCG00000003084	polr2h	100	96.667	Amphiprion_ocellaris
ENSRNOG00000001748	LOC100912534	100	96.667	ENSAPEG00000002614	polr2h	100	96.667	Amphiprion_percula
ENSRNOG00000001748	LOC100912534	100	96.667	ENSATEG00000013227	polr2h	100	96.667	Anabas_testudineus
ENSRNOG00000001748	LOC100912534	100	99.333	ENSACAG00000002828	POLR2H	100	99.333	Anolis_carolinensis
ENSRNOG00000001748	LOC100912534	100	100.000	ENSANAG00000020244	POLR2H	100	100.000	Aotus_nancymaae
ENSRNOG00000001748	LOC100912534	100	96.667	ENSACLG00000026253	polr2h	100	96.667	Astatotilapia_calliptera
ENSRNOG00000001748	LOC100912534	100	96.000	ENSAMXG00000001800	polr2h	100	96.000	Astyanax_mexicanus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSBTAG00000040199	POLR2H	100	100.000	Bos_taurus
ENSRNOG00000001748	LOC100912534	100	63.333	WBGene00017830	rpb-8	100	63.333	Caenorhabditis_elegans
ENSRNOG00000001748	LOC100912534	100	100.000	ENSCJAG00000014959	POLR2H	100	100.000	Callithrix_jacchus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSCAFG00020002558	POLR2H	100	100.000	Canis_lupus_dingo
ENSRNOG00000001748	LOC100912534	100	100.000	ENSCHIG00000006695	POLR2H	100	100.000	Capra_hircus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSTSYG00000007705	-	100	100.000	Carlito_syrichta
ENSRNOG00000001748	LOC100912534	100	94.000	ENSTSYG00000031691	-	82	94.000	Carlito_syrichta
ENSRNOG00000001748	LOC100912534	100	84.768	ENSTSYG00000031988	-	100	84.768	Carlito_syrichta
ENSRNOG00000001748	LOC100912534	100	99.333	ENSCPOG00000040303	POLR2H	100	99.333	Cavia_porcellus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSCCAG00000035087	POLR2H	100	100.000	Cebus_capucinus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSCATG00000045313	POLR2H	100	100.000	Cercocebus_atys
ENSRNOG00000001748	LOC100912534	100	99.333	ENSCLAG00000013016	POLR2H	100	99.333	Chinchilla_lanigera
ENSRNOG00000001748	LOC100912534	100	100.000	ENSCSAG00000013724	POLR2H	80	100.000	Chlorocebus_sabaeus
ENSRNOG00000001748	LOC100912534	74	100.000	ENSCHOG00000009216	POLR2H	100	100.000	Choloepus_hoffmanni
ENSRNOG00000001748	LOC100912534	100	100.000	ENSCPBG00000001462	POLR2H	100	100.000	Chrysemys_picta_bellii
ENSRNOG00000001748	LOC100912534	99	75.333	ENSCING00000011417	-	99	75.333	Ciona_intestinalis
ENSRNOG00000001748	LOC100912534	99	74.667	ENSCSAVG00000006151	-	99	74.667	Ciona_savignyi
ENSRNOG00000001748	LOC100912534	100	100.000	ENSCANG00000023708	POLR2H	100	100.000	Colobus_angolensis_palliatus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSCGRG00001004900	Polr2h	100	100.000	Cricetulus_griseus_chok1gshd
ENSRNOG00000001748	LOC100912534	100	100.000	ENSCGRG00000014304	Polr2h	100	100.000	Cricetulus_griseus_crigri
ENSRNOG00000001748	LOC100912534	100	94.667	ENSCSEG00000015264	polr2h	100	94.667	Cynoglossus_semilaevis
ENSRNOG00000001748	LOC100912534	100	97.333	ENSCVAG00000012410	polr2h	100	97.333	Cyprinodon_variegatus
ENSRNOG00000001748	LOC100912534	100	97.333	ENSDARG00000038505	polr2h	100	97.333	Danio_rerio
ENSRNOG00000001748	LOC100912534	100	100.000	ENSDNOG00000044402	POLR2H	100	100.000	Dasypus_novemcinctus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSDORG00000027475	Polr2h	100	100.000	Dipodomys_ordii
ENSRNOG00000001748	LOC100912534	100	78.000	FBgn0037121	Rpb8	100	78.000	Drosophila_melanogaster
ENSRNOG00000001748	LOC100912534	60	100.000	ENSETEG00000004231	-	60	100.000	Echinops_telfairi
ENSRNOG00000001748	LOC100912534	100	75.429	ENSEBUG00000008233	POLR2H	100	75.429	Eptatretus_burgeri
ENSRNOG00000001748	LOC100912534	100	100.000	ENSEASG00005013088	POLR2H	100	100.000	Equus_asinus_asinus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSECAG00000005828	POLR2H	100	100.000	Equus_caballus
ENSRNOG00000001748	LOC100912534	55	98.795	ENSEEUG00000006139	-	100	98.795	Erinaceus_europaeus
ENSRNOG00000001748	LOC100912534	100	95.333	ENSELUG00000006347	polr2h	100	95.333	Esox_lucius
ENSRNOG00000001748	LOC100912534	100	100.000	ENSFCAG00000007797	POLR2H	100	100.000	Felis_catus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSFALG00000008177	POLR2H	100	100.000	Ficedula_albicollis
ENSRNOG00000001748	LOC100912534	100	100.000	ENSFDAG00000008781	POLR2H	100	100.000	Fukomys_damarensis
ENSRNOG00000001748	LOC100912534	100	97.333	ENSFHEG00000017819	polr2h	100	97.333	Fundulus_heteroclitus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSGALG00000008534	POLR2H	100	100.000	Gallus_gallus
ENSRNOG00000001748	LOC100912534	100	97.333	ENSGAFG00000015424	polr2h	100	97.333	Gambusia_affinis
ENSRNOG00000001748	LOC100912534	100	95.333	ENSGACG00000009019	polr2h	100	95.333	Gasterosteus_aculeatus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSGAGG00000009016	POLR2H	100	100.000	Gopherus_agassizii
ENSRNOG00000001748	LOC100912534	83	100.000	ENSGGOG00000002912	-	100	100.000	Gorilla_gorilla
ENSRNOG00000001748	LOC100912534	100	96.667	ENSHBUG00000006685	polr2h	100	96.667	Haplochromis_burtoni
ENSRNOG00000001748	LOC100912534	100	100.000	ENSHGLG00000012488	POLR2H	100	100.000	Heterocephalus_glaber_female
ENSRNOG00000001748	LOC100912534	100	100.000	ENSHGLG00100009576	POLR2H	100	100.000	Heterocephalus_glaber_male
ENSRNOG00000001748	LOC100912534	100	96.000	ENSHCOG00000010338	polr2h	100	96.000	Hippocampus_comes
ENSRNOG00000001748	LOC100912534	100	96.000	ENSHCOG00000010315	polr2h	100	96.000	Hippocampus_comes
ENSRNOG00000001748	LOC100912534	100	95.333	ENSIPUG00000024331	polr2h	100	95.333	Ictalurus_punctatus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSSTOG00000008300	POLR2H	100	100.000	Ictidomys_tridecemlineatus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSJJAG00000015574	Polr2h	100	100.000	Jaculus_jaculus
ENSRNOG00000001748	LOC100912534	100	96.667	ENSKMAG00000008353	polr2h	100	96.667	Kryptolebias_marmoratus
ENSRNOG00000001748	LOC100912534	100	96.667	ENSLBEG00000018905	polr2h	100	96.667	Labrus_bergylta
ENSRNOG00000001748	LOC100912534	100	97.333	ENSLACG00000015017	POLR2H	100	97.333	Latimeria_chalumnae
ENSRNOG00000001748	LOC100912534	75	95.536	ENSLOCG00000008946	polr2h	100	95.536	Lepisosteus_oculatus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSLAFG00000003573	POLR2H	100	100.000	Loxodonta_africana
ENSRNOG00000001748	LOC100912534	100	100.000	ENSMFAG00000038115	POLR2H	100	100.000	Macaca_fascicularis
ENSRNOG00000001748	LOC100912534	100	100.000	ENSMMUG00000007524	POLR2H	100	100.000	Macaca_mulatta
ENSRNOG00000001748	LOC100912534	100	100.000	ENSMNEG00000037272	POLR2H	100	100.000	Macaca_nemestrina
ENSRNOG00000001748	LOC100912534	100	100.000	ENSMLEG00000039827	POLR2H	100	100.000	Mandrillus_leucophaeus
ENSRNOG00000001748	LOC100912534	100	96.000	ENSMAMG00000001923	polr2h	100	96.000	Mastacembelus_armatus
ENSRNOG00000001748	LOC100912534	100	96.667	ENSMZEG00005017494	polr2h	100	96.667	Maylandia_zebra
ENSRNOG00000001748	LOC100912534	100	100.000	ENSMAUG00000016338	Polr2h	100	100.000	Mesocricetus_auratus
ENSRNOG00000001748	LOC100912534	96	98.611	ENSMICG00000027485	-	94	98.611	Microcebus_murinus
ENSRNOG00000001748	LOC100912534	100	77.333	ENSMICG00000033578	-	100	77.333	Microcebus_murinus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSMICG00000048991	-	100	100.000	Microcebus_murinus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSMOCG00000004886	Polr2h	100	100.000	Microtus_ochrogaster
ENSRNOG00000001748	LOC100912534	100	96.667	ENSMMOG00000008575	polr2h	100	96.667	Mola_mola
ENSRNOG00000001748	LOC100912534	100	100.000	ENSMODG00000002570	POLR2H	100	100.000	Monodelphis_domestica
ENSRNOG00000001748	LOC100912534	100	96.000	ENSMALG00000015108	polr2h	100	96.000	Monopterus_albus
ENSRNOG00000001748	LOC100912534	100	100.000	MGP_CAROLIEiJ_G0020589	Polr2h	100	100.000	Mus_caroli
ENSRNOG00000001748	LOC100912534	100	100.000	ENSMUSG00000021018	Polr2h	100	100.000	Mus_musculus
ENSRNOG00000001748	LOC100912534	100	100.000	MGP_SPRETEiJ_G0021486	Polr2h	100	100.000	Mus_spretus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSMPUG00000002852	POLR2H	100	100.000	Mustela_putorius_furo
ENSRNOG00000001748	LOC100912534	100	100.000	ENSMLUG00000022295	POLR2H	100	100.000	Myotis_lucifugus
ENSRNOG00000001748	LOC100912534	100	78.667	ENSNGAG00000015806	-	100	78.667	Nannospalax_galili
ENSRNOG00000001748	LOC100912534	100	100.000	ENSNGAG00000023997	-	100	100.000	Nannospalax_galili
ENSRNOG00000001748	LOC100912534	100	96.667	ENSNBRG00000001133	polr2h	100	96.667	Neolamprologus_brichardi
ENSRNOG00000001748	LOC100912534	100	100.000	ENSNLEG00000029447	POLR2H	100	100.000	Nomascus_leucogenys
ENSRNOG00000001748	LOC100912534	60	100.000	ENSMEUG00000014141	-	100	100.000	Notamacropus_eugenii
ENSRNOG00000001748	LOC100912534	55	100.000	ENSOPRG00000015024	-	100	100.000	Ochotona_princeps
ENSRNOG00000001748	LOC100912534	100	99.333	ENSODEG00000013008	-	100	99.333	Octodon_degus
ENSRNOG00000001748	LOC100912534	100	99.333	ENSODEG00000020005	-	100	99.333	Octodon_degus
ENSRNOG00000001748	LOC100912534	100	96.667	ENSONIG00000012493	polr2h	100	96.667	Oreochromis_niloticus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSOANG00000010454	POLR2H	100	100.000	Ornithorhynchus_anatinus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSOCUG00000007078	POLR2H	100	100.000	Oryctolagus_cuniculus
ENSRNOG00000001748	LOC100912534	100	95.333	ENSORLG00000023347	polr2h	100	95.333	Oryzias_latipes
ENSRNOG00000001748	LOC100912534	100	95.333	ENSORLG00020017770	polr2h	100	95.333	Oryzias_latipes_hni
ENSRNOG00000001748	LOC100912534	100	95.333	ENSORLG00015013505	polr2h	100	95.333	Oryzias_latipes_hsok
ENSRNOG00000001748	LOC100912534	100	95.333	ENSOMEG00000021100	polr2h	100	95.333	Oryzias_melastigma
ENSRNOG00000001748	LOC100912534	100	100.000	ENSOGAG00000001599	POLR2H	100	100.000	Otolemur_garnettii
ENSRNOG00000001748	LOC100912534	100	100.000	ENSOARG00000020584	POLR2H	100	100.000	Ovis_aries
ENSRNOG00000001748	LOC100912534	100	100.000	ENSPPAG00000035658	-	100	100.000	Pan_paniscus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSPPRG00000004001	POLR2H	100	100.000	Panthera_pardus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSPTIG00000010551	POLR2H	100	100.000	Panthera_tigris_altaica
ENSRNOG00000001748	LOC100912534	100	100.000	ENSPTRG00000047600	-	100	80.667	Pan_troglodytes
ENSRNOG00000001748	LOC100912534	100	100.000	ENSPANG00000020585	POLR2H	100	100.000	Papio_anubis
ENSRNOG00000001748	LOC100912534	100	96.667	ENSPKIG00000022836	polr2h	100	96.667	Paramormyrops_kingsleyae
ENSRNOG00000001748	LOC100912534	76	100.000	ENSPSIG00000017108	POLR2H	100	100.000	Pelodiscus_sinensis
ENSRNOG00000001748	LOC100912534	100	96.667	ENSPMGG00000004693	polr2h	94	96.667	Periophthalmus_magnuspinnatus
ENSRNOG00000001748	LOC100912534	100	92.667	ENSPMAG00000008230	-	100	92.667	Petromyzon_marinus
ENSRNOG00000001748	LOC100912534	100	97.333	ENSPFOG00000024200	polr2h	100	97.333	Poecilia_formosa
ENSRNOG00000001748	LOC100912534	100	97.333	ENSPLAG00000024033	polr2h	100	97.333	Poecilia_latipinna
ENSRNOG00000001748	LOC100912534	100	97.333	ENSPMEG00000005909	polr2h	100	97.333	Poecilia_mexicana
ENSRNOG00000001748	LOC100912534	100	97.333	ENSPREG00000007275	polr2h	100	97.333	Poecilia_reticulata
ENSRNOG00000001748	LOC100912534	100	100.000	ENSPPYG00000014357	-	100	100.000	Pongo_abelii
ENSRNOG00000001748	LOC100912534	100	68.667	ENSPCAG00000015035	-	100	68.667	Procavia_capensis
ENSRNOG00000001748	LOC100912534	100	100.000	ENSPCOG00000021194	POLR2H	100	100.000	Propithecus_coquereli
ENSRNOG00000001748	LOC100912534	100	86.000	ENSPVAG00000004869	POLR2H	100	86.000	Pteropus_vampyrus
ENSRNOG00000001748	LOC100912534	100	96.667	ENSPNYG00000020592	polr2h	100	96.667	Pundamilia_nyererei
ENSRNOG00000001748	LOC100912534	100	94.667	ENSPNAG00000010676	polr2h	100	94.667	Pygocentrus_nattereri
ENSRNOG00000001748	LOC100912534	100	100.000	ENSRBIG00000032148	POLR2H	100	100.000	Rhinopithecus_bieti
ENSRNOG00000001748	LOC100912534	100	100.000	ENSRROG00000040465	POLR2H	100	100.000	Rhinopithecus_roxellana
ENSRNOG00000001748	LOC100912534	98	35.065	YOR224C	RPB8	100	35.065	Saccharomyces_cerevisiae
ENSRNOG00000001748	LOC100912534	100	100.000	ENSSBOG00000033101	POLR2H	100	80.667	Saimiri_boliviensis_boliviensis
ENSRNOG00000001748	LOC100912534	84	100.000	ENSSHAG00000006304	POLR2H	91	100.000	Sarcophilus_harrisii
ENSRNOG00000001748	LOC100912534	100	96.000	ENSSFOG00015014221	polr2h	100	96.000	Scleropages_formosus
ENSRNOG00000001748	LOC100912534	100	96.667	ENSSMAG00000001049	polr2h	100	96.667	Scophthalmus_maximus
ENSRNOG00000001748	LOC100912534	100	96.667	ENSSDUG00000005936	polr2h	100	96.667	Seriola_dumerili
ENSRNOG00000001748	LOC100912534	100	96.667	ENSSLDG00000002246	polr2h	100	96.667	Seriola_lalandi_dorsalis
ENSRNOG00000001748	LOC100912534	100	99.333	ENSSARG00000003429	POLR2H	100	99.333	Sorex_araneus
ENSRNOG00000001748	LOC100912534	76	99.123	ENSSPUG00000014013	-	100	99.123	Sphenodon_punctatus
ENSRNOG00000001748	LOC100912534	100	96.667	ENSSPAG00000012297	polr2h	100	96.667	Stegastes_partitus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSSSCG00000022507	POLR2H	100	100.000	Sus_scrofa
ENSRNOG00000001748	LOC100912534	95	100.000	ENSTGUG00000010383	POLR2H	99	100.000	Taeniopygia_guttata
ENSRNOG00000001748	LOC100912534	100	96.667	ENSTRUG00000007619	polr2h	100	96.667	Takifugu_rubripes
ENSRNOG00000001748	LOC100912534	100	97.333	ENSTNIG00000012183	polr2h	100	97.333	Tetraodon_nigroviridis
ENSRNOG00000001748	LOC100912534	100	59.333	ENSTBEG00000005571	-	100	59.333	Tupaia_belangeri
ENSRNOG00000001748	LOC100912534	100	100.000	ENSTTRG00000011254	POLR2H	100	100.000	Tursiops_truncatus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSUAMG00000004615	POLR2H	100	100.000	Ursus_americanus
ENSRNOG00000001748	LOC100912534	100	100.000	ENSUMAG00000005255	POLR2H	100	100.000	Ursus_maritimus
ENSRNOG00000001748	LOC100912534	100	80.667	ENSVPAG00000009011	-	100	80.667	Vicugna_pacos
ENSRNOG00000001748	LOC100912534	100	100.000	ENSVVUG00000012241	POLR2H	100	100.000	Vulpes_vulpes
ENSRNOG00000001748	LOC100912534	100	98.000	ENSXETG00000017291	polr2h	100	98.000	Xenopus_tropicalis
ENSRNOG00000001748	LOC100912534	100	97.333	ENSXCOG00000003501	polr2h	100	97.333	Xiphophorus_couchianus
ENSRNOG00000001748	LOC100912534	100	97.333	ENSXMAG00000005861	polr2h	100	97.333	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0006360	transcription by RNA polymerase I	-	IEA	Process
GO:0006366	transcription by RNA polymerase II	-	IEA	Process
GO:0006383	transcription by RNA polymerase III	-	IEA	Process