EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000002021 (Gene tree)
Gene ID: 304092
Gene Symbol: Son
Alias: LOC304092
Full Name: Son DNA binding protein
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 31146 bases
Position: chr11:31806618-31837763
Accession: 1309013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000002769	DND1_DSRM	PF14709.7	1.2e-07	1	1
ENSRNOP00000002769	G-patch	PF01585.23	1.6e-15	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000043410	-	7574	-	ENSRNOP00000044186	2323 (aa)	-	E9PTE1
ENSRNOT00000002769	-	8440	XM_006248064	ENSRNOP00000002769	2446 (aa)	XP_006248126	F1MAQ7

Gene Model

Click here to download ENSRNOG00000002021's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000002021's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000002021	Son	79	82.709	ENSG00000159140	SON	100	98.391	Homo_sapiens
ENSRNOG00000002021	Son	79	82.377	ENSTSYG00000008371	SON	100	98.928	Carlito_syrichta
ENSRNOG00000002021	Son	65	94.309	ENSCAPG00000017011	SON	83	94.309	Cavia_aperea
ENSRNOG00000002021	Son	80	98.645	ENSCPOG00000024278	SON	100	99.464	Cavia_porcellus
ENSRNOG00000002021	Son	97	87.865	ENSCCAG00000030234	SON	100	99.464	Cebus_capucinus
ENSRNOG00000002021	Son	79	83.120	ENSCANG00000025986	SON	100	99.464	Colobus_angolensis_palliatus
ENSRNOG00000002021	Son	79	89.547	ENSCGRG00001016220	Son	100	99.732	Cricetulus_griseus_chok1gshd
ENSRNOG00000002021	Son	79	79.775	ENSDNOG00000036246	SON	78	79.570	Dasypus_novemcinctus
ENSRNOG00000002021	Son	81	97.908	ENSETEG00000019427	SON	83	97.908	Echinops_telfairi
ENSRNOG00000002021	Son	79	83.265	ENSECAG00000018098	SON	78	83.616	Equus_caballus
ENSRNOG00000002021	Son	74	97.585	ENSEEUG00000002352	SON	75	97.585	Erinaceus_europaeus
ENSRNOG00000002021	Son	79	82.622	ENSFDAG00000019128	SON	100	99.196	Fukomys_damarensis
ENSRNOG00000002021	Son	74	80.275	ENSHGLG00000010432	SON	100	99.464	Heterocephalus_glaber_female
ENSRNOG00000002021	Son	79	82.473	ENSSTOG00000020593	SON	100	99.464	Ictidomys_tridecemlineatus
ENSRNOG00000002021	Son	79	83.001	ENSMICG00000033920	SON	100	99.196	Microcebus_murinus
ENSRNOG00000002021	Son	79	94.036	ENSMUSG00000022961	Son	100	100.000	Mus_musculus
ENSRNOG00000002021	Son	100	76.507	ENSOPRG00000005068	SON	96	97.842	Ochotona_princeps
ENSRNOG00000002021	Son	79	80.062	ENSOCUG00000003867	SON	79	80.319	Oryctolagus_cuniculus
ENSRNOG00000002021	Son	79	81.590	ENSOGAG00000027319	SON	82	81.385	Otolemur_garnettii
ENSRNOG00000002021	Son	96	83.671	ENSPPAG00000033712	SON	100	99.464	Pan_paniscus
ENSRNOG00000002021	Son	79	82.084	ENSPPRG00000019353	SON	100	99.464	Panthera_pardus
ENSRNOG00000002021	Son	96	99.281	ENSPTIG00000017100	SON	100	99.464	Panthera_tigris_altaica
ENSRNOG00000002021	Son	51	97.842	ENSPVAG00000011186	SON	51	97.842	Pteropus_vampyrus
ENSRNOG00000002021	Son	63	91.972	ENSSARG00000012369	SON	62	94.474	Sorex_araneus
ENSRNOG00000002021	Son	79	82.854	ENSSSCG00000023674	SON	79	82.854	Sus_scrofa
ENSRNOG00000002021	Son	77	99.595	ENSTBEG00000003193	SON	76	99.595	Tupaia_belangeri
ENSRNOG00000002021	Son	78	84.025	ENSTTRG00000004692	SON	76	84.025	Tursiops_truncatus
ENSRNOG00000002021	Son	64	81.138	ENSVPAG00000009150	SON	63	80.838	Vicugna_pacos
ENSRNOG00000002021	Son	99	82.113	ENSVVUG00000022974	SON	80	81.555	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000226	microtubule cytoskeleton organization	-	IEA	Process
GO:0000226	microtubule cytoskeleton organization	-	ISO	Process
GO:0000281	mitotic cytokinesis	-	IEA	Process
GO:0000281	mitotic cytokinesis	-	ISO	Process
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	ISO	Function
GO:0006397	mRNA processing	21873635.	IBA	Process
GO:0006397	mRNA processing	-	ISO	Process
GO:0016607	nuclear speck	-	IEA	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0043066	negative regulation of apoptotic process	-	IEA	Process
GO:0043066	negative regulation of apoptotic process	-	ISO	Process
GO:0043484	regulation of RNA splicing	-	ISO	Process
GO:0048024	regulation of mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0048024	regulation of mRNA splicing, via spliceosome	-	ISO	Process
GO:0050733	RS domain binding	-	IEA	Function
GO:0050733	RS domain binding	-	ISO	Function
GO:0051726	regulation of cell cycle	-	IEA	Process
GO:0051726	regulation of cell cycle	-	ISO	Process