EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000002070 (Gene tree)
Gene ID: 289491
Gene Symbol: Mrpl1
Alias: LOC289491
Full Name: mitochondrial ribosomal protein L1
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Minus strand
Length: 56656 bases
Position: chr14:14951495-15008150
Accession: 1306850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000002834	Ribosomal_L1	PF00687.21	8.3e-17	1	1
ENSRNOP00000069244	Ribosomal_L1	PF00687.21	2.5e-16	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000084617	-	1110	XM_008770009	ENSRNOP00000069244	298 (aa)	-	A0A0G2JUV4
ENSRNOT00000002834	-	966	-	ENSRNOP00000002834	321 (aa)	-	F1M9A4

Gene Model

Click here to download ENSRNOG00000002070's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000002070's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000002070	Mrpl1	98	100.000	ENSRNOG00000045785	LOC100359687	100	99.679

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000002070	Mrpl1	99	74.224	ENSG00000169288	MRPL1	98	76.708	Homo_sapiens
ENSRNOG00000002070	Mrpl1	92	46.823	ENSAPOG00000005831	mrpl1	95	46.823	Acanthochromis_polyacanthus
ENSRNOG00000002070	Mrpl1	88	49.117	ENSACIG00000002298	mrpl1	94	49.117	Amphilophus_citrinellus
ENSRNOG00000002070	Mrpl1	98	46.575	ENSAOCG00000006715	mrpl1	98	45.714	Amphiprion_ocellaris
ENSRNOG00000002070	Mrpl1	78	52.361	ENSAPEG00000020020	mrpl1	86	50.973	Amphiprion_percula
ENSRNOG00000002070	Mrpl1	98	47.603	ENSATEG00000008760	mrpl1	97	47.284	Anabas_testudineus
ENSRNOG00000002070	Mrpl1	73	57.447	ENSAPLG00000003428	MRPL1	85	57.447	Anas_platyrhynchos
ENSRNOG00000002070	Mrpl1	96	46.503	ENSACAG00000012069	MRPL1	78	46.497	Anolis_carolinensis
ENSRNOG00000002070	Mrpl1	98	76.656	ENSANAG00000035463	-	97	75.394	Aotus_nancymaae
ENSRNOG00000002070	Mrpl1	97	62.821	ENSANAG00000020317	-	95	65.385	Aotus_nancymaae
ENSRNOG00000002070	Mrpl1	98	47.260	ENSACLG00000001464	mrpl1	87	46.250	Astatotilapia_calliptera
ENSRNOG00000002070	Mrpl1	83	46.992	ENSAMXG00000033077	mrpl1	72	48.387	Astyanax_mexicanus
ENSRNOG00000002070	Mrpl1	98	78.730	ENSCPOG00000031686	MRPL1	97	78.730	Cavia_porcellus
ENSRNOG00000002070	Mrpl1	100	77.231	ENSCLAG00000005041	MRPL1	99	77.231	Chinchilla_lanigera
ENSRNOG00000002070	Mrpl1	100	70.186	ENSCANG00000033966	MRPL1	99	68.634	Colobus_angolensis_palliatus
ENSRNOG00000002070	Mrpl1	98	86.834	ENSCGRG00001005376	-	98	85.580	Cricetulus_griseus_chok1gshd
ENSRNOG00000002070	Mrpl1	98	86.520	ENSCGRG00000003658	-	98	85.266	Cricetulus_griseus_crigri
ENSRNOG00000002070	Mrpl1	98	40.000	ENSCSEG00000014014	mrpl1	97	40.000	Cynoglossus_semilaevis
ENSRNOG00000002070	Mrpl1	99	45.342	ENSCVAG00000021636	mrpl1	99	45.342	Cyprinodon_variegatus
ENSRNOG00000002070	Mrpl1	98	42.947	ENSDARG00000054606	mrpl1	96	45.141	Danio_rerio
ENSRNOG00000002070	Mrpl1	98	76.433	ENSDNOG00000001665	MRPL1	95	77.143	Dasypus_novemcinctus
ENSRNOG00000002070	Mrpl1	100	76.852	ENSDORG00000015752	Mrpl1	96	76.852	Dipodomys_ordii
ENSRNOG00000002070	Mrpl1	81	34.615	ENSEBUG00000004815	mrpl1	79	34.615	Eptatretus_burgeri
ENSRNOG00000002070	Mrpl1	98	47.811	ENSELUG00000013391	mrpl1	97	47.003	Esox_lucius
ENSRNOG00000002070	Mrpl1	98	78.425	ENSFCAG00000013776	MRPL1	96	77.143	Felis_catus
ENSRNOG00000002070	Mrpl1	87	49.117	ENSFALG00000008527	MRPL1	83	53.975	Ficedula_albicollis
ENSRNOG00000002070	Mrpl1	99	75.926	ENSFDAG00000011113	MRPL1	99	75.926	Fukomys_damarensis
ENSRNOG00000002070	Mrpl1	99	47.188	ENSFHEG00000012375	mrpl1	99	47.188	Fundulus_heteroclitus
ENSRNOG00000002070	Mrpl1	98	46.735	ENSGALG00000010324	MRPL1	93	48.276	Gallus_gallus
ENSRNOG00000002070	Mrpl1	99	45.312	ENSGAFG00000006089	mrpl1	85	45.312	Gambusia_affinis
ENSRNOG00000002070	Mrpl1	98	55.405	ENSGAGG00000015092	MRPL1	95	53.918	Gopherus_agassizii
ENSRNOG00000002070	Mrpl1	99	73.913	ENSGGOG00000001304	MRPL1	98	76.398	Gorilla_gorilla
ENSRNOG00000002070	Mrpl1	98	47.945	ENSHBUG00000004985	mrpl1	99	46.875	Haplochromis_burtoni
ENSRNOG00000002070	Mrpl1	99	77.812	ENSHGLG00000006127	MRPL1	98	77.812	Heterocephalus_glaber_female
ENSRNOG00000002070	Mrpl1	99	77.812	ENSHGLG00100004303	MRPL1	98	77.812	Heterocephalus_glaber_male
ENSRNOG00000002070	Mrpl1	76	47.556	ENSIPUG00000009866	mrpl1	87	46.667	Ictalurus_punctatus
ENSRNOG00000002070	Mrpl1	97	80.189	ENSSTOG00000001415	MRPL1	99	79.814	Ictidomys_tridecemlineatus
ENSRNOG00000002070	Mrpl1	95	75.000	ENSJJAG00000012571	Mrpl1	94	75.490	Jaculus_jaculus
ENSRNOG00000002070	Mrpl1	98	45.548	ENSKMAG00000004236	mrpl1	74	53.448	Kryptolebias_marmoratus
ENSRNOG00000002070	Mrpl1	72	49.145	ENSLBEG00000013686	-	82	49.145	Labrus_bergylta
ENSRNOG00000002070	Mrpl1	96	44.792	ENSLBEG00000017454	-	92	45.486	Labrus_bergylta
ENSRNOG00000002070	Mrpl1	96	50.323	ENSLACG00000008208	MRPL1	94	49.677	Latimeria_chalumnae
ENSRNOG00000002070	Mrpl1	99	48.607	ENSLOCG00000007408	mrpl1	98	47.401	Lepisosteus_oculatus
ENSRNOG00000002070	Mrpl1	65	81.013	ENSMFAG00000030593	MRPL1	96	81.013	Macaca_fascicularis
ENSRNOG00000002070	Mrpl1	85	77.455	ENSMLEG00000030203	MRPL1	92	78.868	Mandrillus_leucophaeus
ENSRNOG00000002070	Mrpl1	98	49.320	ENSMAMG00000016943	mrpl1	98	47.950	Mastacembelus_armatus
ENSRNOG00000002070	Mrpl1	98	47.603	ENSMZEG00005020288	mrpl1	99	46.562	Maylandia_zebra
ENSRNOG00000002070	Mrpl1	81	50.207	ENSMGAG00000005136	MRPL1	85	55.230	Meleagris_gallopavo
ENSRNOG00000002070	Mrpl1	83	72.388	ENSMAUG00000019228	Mrpl1	87	74.510	Mesocricetus_auratus
ENSRNOG00000002070	Mrpl1	82	81.301	ENSMICG00000032729	-	94	81.818	Microcebus_murinus
ENSRNOG00000002070	Mrpl1	98	87.382	ENSMOCG00000017395	Mrpl1	98	87.382	Microtus_ochrogaster
ENSRNOG00000002070	Mrpl1	83	67.778	ENSMODG00000011704	MRPL1	91	69.615	Monodelphis_domestica
ENSRNOG00000002070	Mrpl1	99	45.625	ENSMALG00000006393	mrpl1	99	45.625	Monopterus_albus
ENSRNOG00000002070	Mrpl1	98	92.429	ENSMUSG00000029486	Mrpl1	97	90.769	Mus_musculus
ENSRNOG00000002070	Mrpl1	98	92.114	MGP_PahariEiJ_G0017208	Mrpl1	97	90.462	Mus_pahari
ENSRNOG00000002070	Mrpl1	98	92.517	MGP_SPRETEiJ_G0028427	Mrpl1	97	91.358	Mus_spretus
ENSRNOG00000002070	Mrpl1	98	78.767	ENSMPUG00000006794	MRPL1	93	79.538	Mustela_putorius_furo
ENSRNOG00000002070	Mrpl1	95	82.686	ENSNGAG00000015669	Mrpl1	97	82.410	Nannospalax_galili
ENSRNOG00000002070	Mrpl1	88	49.470	ENSNBRG00000016660	mrpl1	88	49.470	Neolamprologus_brichardi
ENSRNOG00000002070	Mrpl1	99	74.375	ENSODEG00000004206	MRPL1	98	74.375	Octodon_degus
ENSRNOG00000002070	Mrpl1	98	47.959	ENSONIG00000014024	mrpl1	99	46.894	Oreochromis_niloticus
ENSRNOG00000002070	Mrpl1	82	68.939	ENSOANG00000003564	MRPL1	91	69.767	Ornithorhynchus_anatinus
ENSRNOG00000002070	Mrpl1	99	81.562	ENSOCUG00000003852	MRPL1	96	82.540	Oryctolagus_cuniculus
ENSRNOG00000002070	Mrpl1	85	47.445	ENSORLG00000018859	mrpl1	79	46.947	Oryzias_latipes
ENSRNOG00000002070	Mrpl1	81	47.529	ENSOMEG00000010049	mrpl1	82	47.529	Oryzias_melastigma
ENSRNOG00000002070	Mrpl1	91	76.712	ENSOGAG00000012126	MRPL1	98	75.839	Otolemur_garnettii
ENSRNOG00000002070	Mrpl1	99	73.913	ENSPPAG00000041378	MRPL1	98	76.398	Pan_paniscus
ENSRNOG00000002070	Mrpl1	98	78.425	ENSPPRG00000009221	MRPL1	96	77.143	Panthera_pardus
ENSRNOG00000002070	Mrpl1	98	78.767	ENSPTIG00000015465	MRPL1	96	77.460	Panthera_tigris_altaica
ENSRNOG00000002070	Mrpl1	99	74.224	ENSPTRG00000016199	MRPL1	98	76.708	Pan_troglodytes
ENSRNOG00000002070	Mrpl1	99	75.776	ENSPANG00000007832	MRPL1	99	75.155	Papio_anubis
ENSRNOG00000002070	Mrpl1	100	44.745	ENSPKIG00000019299	mrpl1	77	51.163	Paramormyrops_kingsleyae
ENSRNOG00000002070	Mrpl1	67	63.256	ENSPSIG00000015906	MRPL1	96	63.256	Pelodiscus_sinensis
ENSRNOG00000002070	Mrpl1	77	49.603	ENSPMGG00000004020	mrpl1	87	47.569	Periophthalmus_magnuspinnatus
ENSRNOG00000002070	Mrpl1	100	85.846	ENSPEMG00000018072	-	100	85.846	Peromyscus_maniculatus_bairdii
ENSRNOG00000002070	Mrpl1	96	61.165	ENSPCIG00000029496	-	92	60.841	Phascolarctos_cinereus
ENSRNOG00000002070	Mrpl1	99	45.625	ENSPFOG00000013095	mrpl1	98	45.625	Poecilia_formosa
ENSRNOG00000002070	Mrpl1	99	45.625	ENSPLAG00000019871	mrpl1	99	45.625	Poecilia_latipinna
ENSRNOG00000002070	Mrpl1	99	45.625	ENSPMEG00000015846	mrpl1	99	45.625	Poecilia_mexicana
ENSRNOG00000002070	Mrpl1	99	45.000	ENSPREG00000003524	mrpl1	99	45.000	Poecilia_reticulata
ENSRNOG00000002070	Mrpl1	99	73.292	ENSPPYG00000014870	MRPL1	98	75.776	Pongo_abelii
ENSRNOG00000002070	Mrpl1	98	46.918	ENSPNYG00000006464	mrpl1	98	45.625	Pundamilia_nyererei
ENSRNOG00000002070	Mrpl1	79	50.787	ENSPNAG00000018662	mrpl1	82	49.810	Pygocentrus_nattereri
ENSRNOG00000002070	Mrpl1	99	75.776	ENSRBIG00000040801	MRPL1	99	74.224	Rhinopithecus_bieti
ENSRNOG00000002070	Mrpl1	99	76.087	ENSRROG00000041586	MRPL1	99	74.534	Rhinopithecus_roxellana
ENSRNOG00000002070	Mrpl1	98	63.608	ENSSHAG00000001696	MRPL1	96	62.658	Sarcophilus_harrisii
ENSRNOG00000002070	Mrpl1	99	42.121	ENSSFOG00015014444	mrpl1	99	43.333	Scleropages_formosus
ENSRNOG00000002070	Mrpl1	98	46.259	ENSSMAG00000015530	mrpl1	97	46.372	Scophthalmus_maximus
ENSRNOG00000002070	Mrpl1	98	44.863	ENSSDUG00000018458	mrpl1	98	44.762	Seriola_dumerili
ENSRNOG00000002070	Mrpl1	98	44.863	ENSSLDG00000000399	mrpl1	90	44.762	Seriola_lalandi_dorsalis
ENSRNOG00000002070	Mrpl1	72	57.328	ENSSPUG00000002005	MRPL1	76	57.328	Sphenodon_punctatus
ENSRNOG00000002070	Mrpl1	98	44.710	ENSSPAG00000022922	mrpl1	94	42.222	Stegastes_partitus
ENSRNOG00000002070	Mrpl1	87	49.643	ENSTGUG00000001739	MRPL1	83	49.442	Taeniopygia_guttata
ENSRNOG00000002070	Mrpl1	98	47.260	ENSTRUG00000004229	mrpl1	97	46.965	Takifugu_rubripes
ENSRNOG00000002070	Mrpl1	99	47.040	ENSTNIG00000016716	mrpl1	99	47.040	Tetraodon_nigroviridis
ENSRNOG00000002070	Mrpl1	97	77.244	ENSUMAG00000007973	MRPL1	98	81.579	Ursus_maritimus
ENSRNOG00000002070	Mrpl1	98	46.230	ENSXETG00000000373	mrpl1	94	45.566	Xenopus_tropicalis
ENSRNOG00000002070	Mrpl1	99	44.272	ENSXMAG00000002920	mrpl1	80	49.618	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005739	mitochondrion	-	IEA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0006412	translation	-	IEA	Process
GO:0015934	large ribosomal subunit	-	IEA	Component