EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSRNOG00000002075 (Gene tree)
Gene ID: 360917
Gene Symbol: Cnot6l
Alias: LOC360917
Full Name: CCR4-NOT transcription complex%2C subunit 6-like
Gene Type: protein_coding
Species: Rattus_norvegicus
Status: putative
Strand: Plus strand
Length: 87200 bases
Position: chr14:15059387-15146586
Accession: 1309128
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSRNOP00000002843	Exo_endo_phos	PF03372.23	2.5e-22	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSRNOT00000002843	-	4468	XM_006250708	ENSRNOP00000002843	550 (aa)	XP_006250770	F1M642

Gene Model

Click here to download ENSRNOG00000002075's gene model file

Pathways

Pathway ID	Pathway Name	Source
rno03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSRNOG00000002075's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSRNOG00000002075	Cnot6l	100	76.302	ENSRNOG00000054891	Cnot6	100	76.302

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSRNOG00000002075	Cnot6l	100	98.000	ENSG00000138767	CNOT6L	100	98.000	Homo_sapiens
ENSRNOG00000002075	Cnot6l	100	82.703	ENSAPOG00000005894	cnot6l	100	83.243	Acanthochromis_polyacanthus
ENSRNOG00000002075	Cnot6l	100	98.000	ENSAMEG00000005570	CNOT6L	99	98.000	Ailuropoda_melanoleuca
ENSRNOG00000002075	Cnot6l	96	85.338	ENSACIG00000002515	cnot6l	100	83.784	Amphilophus_citrinellus
ENSRNOG00000002075	Cnot6l	100	79.459	ENSAOCG00000006705	cnot6l	100	80.000	Amphiprion_ocellaris
ENSRNOG00000002075	Cnot6l	100	79.928	ENSAPEG00000020035	cnot6l	100	80.470	Amphiprion_percula
ENSRNOG00000002075	Cnot6l	100	83.604	ENSATEG00000008774	cnot6l	100	83.964	Anabas_testudineus
ENSRNOG00000002075	Cnot6l	100	94.784	ENSAPLG00000003448	CNOT6L	100	94.784	Anas_platyrhynchos
ENSRNOG00000002075	Cnot6l	99	93.625	ENSACAG00000012099	CNOT6L	99	93.625	Anolis_carolinensis
ENSRNOG00000002075	Cnot6l	100	98.000	ENSANAG00000023917	CNOT6L	99	98.000	Aotus_nancymaae
ENSRNOG00000002075	Cnot6l	96	83.647	ENSACLG00000000879	cnot6l	100	82.162	Astatotilapia_calliptera
ENSRNOG00000002075	Cnot6l	100	82.246	ENSAMXG00000008943	cnot6l	98	81.522	Astyanax_mexicanus
ENSRNOG00000002075	Cnot6l	100	98.000	ENSBTAG00000049571	CNOT6L	99	98.000	Bos_taurus
ENSRNOG00000002075	Cnot6l	100	98.182	ENSCJAG00000014846	CNOT6L	99	98.182	Callithrix_jacchus
ENSRNOG00000002075	Cnot6l	100	98.182	ENSCAFG00000008699	CNOT6L	99	98.182	Canis_familiaris
ENSRNOG00000002075	Cnot6l	100	96.727	ENSCAFG00020011108	CNOT6L	100	96.727	Canis_lupus_dingo
ENSRNOG00000002075	Cnot6l	100	98.000	ENSCHIG00000006297	CNOT6L	99	98.000	Capra_hircus
ENSRNOG00000002075	Cnot6l	100	98.000	ENSTSYG00000009068	CNOT6L	100	98.000	Carlito_syrichta
ENSRNOG00000002075	Cnot6l	86	100.000	ENSCPOG00000010337	CNOT6L	99	100.000	Cavia_porcellus
ENSRNOG00000002075	Cnot6l	100	98.000	ENSCCAG00000025000	CNOT6L	99	98.000	Cebus_capucinus
ENSRNOG00000002075	Cnot6l	100	98.000	ENSCATG00000029623	CNOT6L	99	98.000	Cercocebus_atys
ENSRNOG00000002075	Cnot6l	100	97.455	ENSCLAG00000004598	CNOT6L	99	97.455	Chinchilla_lanigera
ENSRNOG00000002075	Cnot6l	100	98.000	ENSCSAG00000004580	CNOT6L	99	98.000	Chlorocebus_sabaeus
ENSRNOG00000002075	Cnot6l	74	100.000	ENSCHOG00000001108	-	69	100.000	Choloepus_hoffmanni
ENSRNOG00000002075	Cnot6l	100	96.364	ENSCPBG00000019403	CNOT6L	100	96.364	Chrysemys_picta_bellii
ENSRNOG00000002075	Cnot6l	100	98.000	ENSCANG00000028583	CNOT6L	99	98.000	Colobus_angolensis_palliatus
ENSRNOG00000002075	Cnot6l	100	100.000	ENSCGRG00001022099	Cnot6l	100	100.000	Cricetulus_griseus_chok1gshd
ENSRNOG00000002075	Cnot6l	100	99.273	ENSCGRG00000000543	Cnot6l	100	99.273	Cricetulus_griseus_crigri
ENSRNOG00000002075	Cnot6l	76	80.907	ENSCSEG00000010395	-	98	80.907	Cynoglossus_semilaevis
ENSRNOG00000002075	Cnot6l	100	80.901	ENSCSEG00000014001	cnot6l	100	80.901	Cynoglossus_semilaevis
ENSRNOG00000002075	Cnot6l	98	85.343	ENSCVAG00000021683	cnot6l	95	85.150	Cyprinodon_variegatus
ENSRNOG00000002075	Cnot6l	99	83.607	ENSDARG00000054597	cnot6l	98	82.696	Danio_rerio
ENSRNOG00000002075	Cnot6l	100	88.267	ENSDNOG00000004229	CNOT6L	99	98.131	Dasypus_novemcinctus
ENSRNOG00000002075	Cnot6l	100	88.727	ENSDORG00000011458	Cnot6l	100	88.727	Dipodomys_ordii
ENSRNOG00000002075	Cnot6l	100	70.515	ENSEBUG00000004849	cnot6l	100	69.627	Eptatretus_burgeri
ENSRNOG00000002075	Cnot6l	87	97.708	ENSEASG00005016429	CNOT6L	91	97.708	Equus_asinus_asinus
ENSRNOG00000002075	Cnot6l	93	97.856	ENSECAG00000001582	CNOT6L	88	97.856	Equus_caballus
ENSRNOG00000002075	Cnot6l	99	82.364	ENSELUG00000013353	cnot6l	87	82.000	Esox_lucius
ENSRNOG00000002075	Cnot6l	100	98.182	ENSFCAG00000008322	CNOT6L	99	98.182	Felis_catus
ENSRNOG00000002075	Cnot6l	100	94.909	ENSFALG00000008515	CNOT6L	99	94.909	Ficedula_albicollis
ENSRNOG00000002075	Cnot6l	100	97.455	ENSFDAG00000007719	CNOT6L	95	97.455	Fukomys_damarensis
ENSRNOG00000002075	Cnot6l	100	75.583	ENSFHEG00000012364	cnot6l	100	75.943	Fundulus_heteroclitus
ENSRNOG00000002075	Cnot6l	87	71.875	ENSGMOG00000000730	cnot6l	99	71.875	Gadus_morhua
ENSRNOG00000002075	Cnot6l	92	62.253	ENSGMOG00000011077	-	99	62.253	Gadus_morhua
ENSRNOG00000002075	Cnot6l	100	95.818	ENSGALG00000010333	CNOT6L	90	95.818	Gallus_gallus
ENSRNOG00000002075	Cnot6l	97	83.985	ENSGAFG00000006105	cnot6l	98	84.023	Gambusia_affinis
ENSRNOG00000002075	Cnot6l	87	95.417	ENSGAGG00000008605	CNOT6L	93	95.417	Gopherus_agassizii
ENSRNOG00000002075	Cnot6l	100	98.000	ENSGGOG00000023412	CNOT6L	98	98.000	Gorilla_gorilla
ENSRNOG00000002075	Cnot6l	100	81.622	ENSHBUG00000004755	cnot6l	95	83.402	Haplochromis_burtoni
ENSRNOG00000002075	Cnot6l	100	97.636	ENSHGLG00000006452	CNOT6L	100	97.636	Heterocephalus_glaber_female
ENSRNOG00000002075	Cnot6l	100	97.636	ENSHGLG00100012384	CNOT6L	98	97.636	Heterocephalus_glaber_male
ENSRNOG00000002075	Cnot6l	99	73.205	ENSHCOG00000009512	cnot6l	94	75.786	Hippocampus_comes
ENSRNOG00000002075	Cnot6l	100	81.341	ENSIPUG00000009879	cnot6l	100	80.978	Ictalurus_punctatus
ENSRNOG00000002075	Cnot6l	100	98.000	ENSSTOG00000015293	CNOT6L	100	98.000	Ictidomys_tridecemlineatus
ENSRNOG00000002075	Cnot6l	100	98.727	ENSJJAG00000020583	Cnot6l	99	98.727	Jaculus_jaculus
ENSRNOG00000002075	Cnot6l	100	81.802	ENSKMAG00000004165	cnot6l	100	82.162	Kryptolebias_marmoratus
ENSRNOG00000002075	Cnot6l	100	81.013	ENSLBEG00000027202	cnot6l	100	81.193	Labrus_bergylta
ENSRNOG00000002075	Cnot6l	100	90.727	ENSLACG00000004684	CNOT6L	100	90.000	Latimeria_chalumnae
ENSRNOG00000002075	Cnot6l	100	83.666	ENSLOCG00000007420	cnot6l	92	82.940	Lepisosteus_oculatus
ENSRNOG00000002075	Cnot6l	100	98.000	ENSLAFG00000011449	CNOT6L	100	95.907	Loxodonta_africana
ENSRNOG00000002075	Cnot6l	100	98.000	ENSMFAG00000044296	CNOT6L	99	98.000	Macaca_fascicularis
ENSRNOG00000002075	Cnot6l	100	98.000	ENSMMUG00000045609	CNOT6L	98	98.000	Macaca_mulatta
ENSRNOG00000002075	Cnot6l	100	98.000	ENSMNEG00000041259	CNOT6L	100	98.000	Macaca_nemestrina
ENSRNOG00000002075	Cnot6l	100	98.000	ENSMLEG00000029198	CNOT6L	98	98.000	Mandrillus_leucophaeus
ENSRNOG00000002075	Cnot6l	96	85.338	ENSMAMG00000016954	cnot6l	94	85.338	Mastacembelus_armatus
ENSRNOG00000002075	Cnot6l	96	83.647	ENSMZEG00005020235	cnot6l	100	82.162	Maylandia_zebra
ENSRNOG00000002075	Cnot6l	100	95.818	ENSMGAG00000005144	CNOT6L	99	95.818	Meleagris_gallopavo
ENSRNOG00000002075	Cnot6l	100	97.636	ENSMICG00000017026	CNOT6L	99	97.636	Microcebus_murinus
ENSRNOG00000002075	Cnot6l	100	100.000	ENSMOCG00000009451	Cnot6l	99	100.000	Microtus_ochrogaster
ENSRNOG00000002075	Cnot6l	100	83.273	ENSMMOG00000014621	cnot6l	100	83.063	Mola_mola
ENSRNOG00000002075	Cnot6l	100	97.091	ENSMODG00000011744	CNOT6L	75	97.091	Monodelphis_domestica
ENSRNOG00000002075	Cnot6l	96	84.774	ENSMALG00000006354	cnot6l	96	84.774	Monopterus_albus
ENSRNOG00000002075	Cnot6l	100	100.000	MGP_CAROLIEiJ_G0027429	Cnot6l	100	100.000	Mus_caroli
ENSRNOG00000002075	Cnot6l	100	100.000	ENSMUSG00000034724	Cnot6l	100	100.000	Mus_musculus
ENSRNOG00000002075	Cnot6l	100	100.000	MGP_PahariEiJ_G0017207	Cnot6l	100	100.000	Mus_pahari
ENSRNOG00000002075	Cnot6l	100	100.000	MGP_SPRETEiJ_G0028426	Cnot6l	100	100.000	Mus_spretus
ENSRNOG00000002075	Cnot6l	95	93.511	ENSMPUG00000003895	CNOT6L	100	93.511	Mustela_putorius_furo
ENSRNOG00000002075	Cnot6l	93	97.276	ENSMLUG00000000936	CNOT6L	100	97.276	Myotis_lucifugus
ENSRNOG00000002075	Cnot6l	100	99.636	ENSNGAG00000019803	Cnot6l	100	99.636	Nannospalax_galili
ENSRNOG00000002075	Cnot6l	86	81.381	ENSNBRG00000016345	cnot6l	80	80.723	Neolamprologus_brichardi
ENSRNOG00000002075	Cnot6l	100	98.000	ENSNLEG00000028820	CNOT6L	99	98.000	Nomascus_leucogenys
ENSRNOG00000002075	Cnot6l	80	84.127	ENSMEUG00000009767	-	79	84.000	Notamacropus_eugenii
ENSRNOG00000002075	Cnot6l	100	97.636	ENSODEG00000004161	CNOT6L	99	97.636	Octodon_degus
ENSRNOG00000002075	Cnot6l	96	83.240	ENSONIG00000013992	cnot6l	97	81.786	Oreochromis_niloticus
ENSRNOG00000002075	Cnot6l	100	96.727	ENSOANG00000003561	CNOT6L	100	96.727	Ornithorhynchus_anatinus
ENSRNOG00000002075	Cnot6l	100	97.818	ENSOCUG00000002497	CNOT6L	99	97.818	Oryctolagus_cuniculus
ENSRNOG00000002075	Cnot6l	100	81.013	ENSORLG00000018874	cnot6l	100	81.193	Oryzias_latipes
ENSRNOG00000002075	Cnot6l	100	80.935	ENSOMEG00000010026	cnot6l	100	80.901	Oryzias_melastigma
ENSRNOG00000002075	Cnot6l	100	94.595	ENSOGAG00000012122	CNOT6L	100	94.595	Otolemur_garnettii
ENSRNOG00000002075	Cnot6l	100	98.000	ENSOARG00000017771	CNOT6L	99	98.000	Ovis_aries
ENSRNOG00000002075	Cnot6l	84	100.000	ENSPPAG00000034242	-	98	100.000	Pan_paniscus
ENSRNOG00000002075	Cnot6l	100	95.455	ENSPPAG00000030178	-	100	95.455	Pan_paniscus
ENSRNOG00000002075	Cnot6l	100	98.182	ENSPPRG00000008857	CNOT6L	99	98.182	Panthera_pardus
ENSRNOG00000002075	Cnot6l	100	98.182	ENSPTIG00000015698	CNOT6L	99	98.182	Panthera_tigris_altaica
ENSRNOG00000002075	Cnot6l	84	100.000	ENSPTRG00000045291	-	99	100.000	Pan_troglodytes
ENSRNOG00000002075	Cnot6l	100	98.000	ENSPTRG00000016198	CNOT6L	99	98.000	Pan_troglodytes
ENSRNOG00000002075	Cnot6l	100	98.000	ENSPANG00000007831	CNOT6L	99	98.000	Papio_anubis
ENSRNOG00000002075	Cnot6l	100	84.420	ENSPKIG00000002892	cnot6l	100	83.152	Paramormyrops_kingsleyae
ENSRNOG00000002075	Cnot6l	100	95.636	ENSPSIG00000016241	CNOT6L	99	95.636	Pelodiscus_sinensis
ENSRNOG00000002075	Cnot6l	99	78.650	ENSPMGG00000004021	cnot6l	99	78.650	Periophthalmus_magnuspinnatus
ENSRNOG00000002075	Cnot6l	100	100.000	ENSPEMG00000011554	Cnot6l	100	100.000	Peromyscus_maniculatus_bairdii
ENSRNOG00000002075	Cnot6l	96	72.593	ENSPMAG00000005706	cnot6l	96	72.610	Petromyzon_marinus
ENSRNOG00000002075	Cnot6l	100	96.364	ENSPCIG00000027504	-	100	96.364	Phascolarctos_cinereus
ENSRNOG00000002075	Cnot6l	100	83.993	ENSPFOG00000013163	cnot6l	100	83.423	Poecilia_formosa
ENSRNOG00000002075	Cnot6l	100	83.813	ENSPLAG00000019862	cnot6l	100	83.243	Poecilia_latipinna
ENSRNOG00000002075	Cnot6l	100	83.813	ENSPMEG00000015834	cnot6l	100	83.243	Poecilia_mexicana
ENSRNOG00000002075	Cnot6l	100	83.423	ENSPREG00000003561	cnot6l	100	83.423	Poecilia_reticulata
ENSRNOG00000002075	Cnot6l	100	98.000	ENSPPYG00000014869	CNOT6L	100	98.000	Pongo_abelii
ENSRNOG00000002075	Cnot6l	100	66.909	ENSPCAG00000016617	CNOT6L	94	66.909	Procavia_capensis
ENSRNOG00000002075	Cnot6l	100	98.000	ENSPCOG00000014669	CNOT6L	99	98.000	Propithecus_coquereli
ENSRNOG00000002075	Cnot6l	83	98.100	ENSPVAG00000002690	CNOT6L	78	98.100	Pteropus_vampyrus
ENSRNOG00000002075	Cnot6l	87	80.952	ENSPNYG00000006717	cnot6l	92	79.249	Pundamilia_nyererei
ENSRNOG00000002075	Cnot6l	100	82.609	ENSPNAG00000003537	cnot6l	98	82.065	Pygocentrus_nattereri
ENSRNOG00000002075	Cnot6l	100	98.000	ENSRBIG00000027644	CNOT6L	99	98.000	Rhinopithecus_bieti
ENSRNOG00000002075	Cnot6l	100	98.182	ENSRROG00000031003	CNOT6L	100	98.182	Rhinopithecus_roxellana
ENSRNOG00000002075	Cnot6l	100	98.000	ENSSBOG00000028521	CNOT6L	100	98.000	Saimiri_boliviensis_boliviensis
ENSRNOG00000002075	Cnot6l	100	96.909	ENSSHAG00000006072	CNOT6L	99	96.909	Sarcophilus_harrisii
ENSRNOG00000002075	Cnot6l	100	82.609	ENSSFOG00015019044	cnot6l	100	82.609	Scleropages_formosus
ENSRNOG00000002075	Cnot6l	100	81.655	ENSSMAG00000015568	cnot6l	100	81.081	Scophthalmus_maximus
ENSRNOG00000002075	Cnot6l	100	84.505	ENSSDUG00000018426	cnot6l	100	83.784	Seriola_dumerili
ENSRNOG00000002075	Cnot6l	100	84.324	ENSSLDG00000000335	cnot6l	100	83.604	Seriola_lalandi_dorsalis
ENSRNOG00000002075	Cnot6l	100	95.273	ENSSPUG00000002016	CNOT6L	100	95.273	Sphenodon_punctatus
ENSRNOG00000002075	Cnot6l	96	85.338	ENSSPAG00000022932	cnot6l	100	83.784	Stegastes_partitus
ENSRNOG00000002075	Cnot6l	100	97.818	ENSSSCG00000008989	CNOT6L	100	97.818	Sus_scrofa
ENSRNOG00000002075	Cnot6l	100	95.273	ENSTGUG00000001737	-	99	95.273	Taeniopygia_guttata
ENSRNOG00000002075	Cnot6l	100	82.523	ENSTRUG00000004332	cnot6l	100	82.342	Takifugu_rubripes
ENSRNOG00000002075	Cnot6l	100	81.295	ENSTNIG00000016717	cnot6l	100	81.261	Tetraodon_nigroviridis
ENSRNOG00000002075	Cnot6l	87	92.708	ENSTBEG00000016519	CNOT6L	96	92.708	Tupaia_belangeri
ENSRNOG00000002075	Cnot6l	87	97.083	ENSTTRG00000005606	CNOT6L	99	97.083	Tursiops_truncatus
ENSRNOG00000002075	Cnot6l	100	98.000	ENSUAMG00000026982	CNOT6L	100	98.000	Ursus_americanus
ENSRNOG00000002075	Cnot6l	100	98.000	ENSUMAG00000007955	CNOT6L	99	98.000	Ursus_maritimus
ENSRNOG00000002075	Cnot6l	100	93.273	ENSVPAG00000010892	CNOT6L	99	93.273	Vicugna_pacos
ENSRNOG00000002075	Cnot6l	100	98.182	ENSVVUG00000024858	CNOT6L	100	98.561	Vulpes_vulpes
ENSRNOG00000002075	Cnot6l	100	89.091	ENSXETG00000000372	cnot6l	99	89.091	Xenopus_tropicalis
ENSRNOG00000002075	Cnot6l	100	83.243	ENSXMAG00000002900	cnot6l	100	82.883	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000288	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	-	IEA	Process
GO:0000288	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	-	ISO	Process
GO:0003674	molecular_function	-	ND	Function
GO:0004535	poly(A)-specific ribonuclease activity	-	IEA	Function
GO:0004535	poly(A)-specific ribonuclease activity	-	ISO	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	IEA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0008150	biological_process	-	ND	Process
GO:0008284	positive regulation of cell proliferation	-	IEA	Process
GO:0008284	positive regulation of cell proliferation	-	ISO	Process
GO:0010606	positive regulation of cytoplasmic mRNA processing body assembly	-	IEA	Process
GO:0010606	positive regulation of cytoplasmic mRNA processing body assembly	-	ISO	Process
GO:0030014	CCR4-NOT complex	-	IEA	Component
GO:0030014	CCR4-NOT complex	-	ISO	Component
GO:0061157	mRNA destabilization	-	IEA	Process
GO:0061157	mRNA destabilization	-	ISO	Process
GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic	-	IEA	Process